RNA–Protein interactions for RNA: ENST00000462743.1

HPS1-206, Transcript of HPS1, biogenesis of lysosomal organelles complex 3 subunit 1, humanhuman

TSL 3

Gene HPS1, Length 431 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS1-206ENST00000462743 ATP6V0A2Q9Y487 856 aa15.35■□□□□ 0.05
HPS1-206ENST00000462743 ABCC4O15439 1325 aa15.35■□□□□ 0.05
HPS1-206ENST00000462743 ZC3H4Q9UPT8 1303 aaKnown RBP15.35■□□□□ 0.05
HPS1-206ENST00000462743 UTRNP46939 3433 aa15.34■□□□□ 0.05
HPS1-206ENST00000462743 FKBP4Q02790 459 aaKnown RBP eCLIP15.34■□□□□ 0.05
HPS1-206ENST00000462743 ARHGAP45Q92619 1136 aa15.34■□□□□ 0.05
HPS1-206ENST00000462743 JARID2Q92833 1246 aaPredicted RBP15.34■□□□□ 0.05
HPS1-206ENST00000462743 PSMD1Q99460 953 aa15.34■□□□□ 0.05
HPS1-206ENST00000462743 SRCIN1Q9C0H9 1055 aa15.34■□□□□ 0.05
HPS1-206ENST00000462743 TAOK3Q9H2K8 898 aa15.34■□□□□ 0.05
HPS1-206ENST00000462743 SMC4Q9NTJ3 1288 aa15.34■□□□□ 0.05
HPS1-206ENST00000462743 TAF1P21675 1872 aa15.33■□□□□ 0.05
HPS1-206ENST00000462743 PPEF1O14829 653 aaPredicted RBP15.33■□□□□ 0.04
HPS1-206ENST00000462743 CSF1RP07333 972 aa15.33■□□□□ 0.04
HPS1-206ENST00000462743 RPS8P62241 208 aaKnown RBP15.33■□□□□ 0.04
HPS1-206ENST00000462743 RASSF7Q02833 373 aa15.33■□□□□ 0.04
HPS1-206ENST00000462743 CCDC152Q4G0S7 254 aa15.33■□□□□ 0.04
HPS1-206ENST00000462743 TTLL11Q8NHH1 800 aa15.33■□□□□ 0.04
HPS1-206ENST00000462743 RNF181Q9P0P0 153 aa15.33■□□□□ 0.04
HPS1-206ENST00000462743 RTL9Q8NET4 1388 aa15.33■□□□□ 0.04
HPS1-206ENST00000462743 MYH3P11055 1940 aa15.33■□□□□ 0.04
HPS1-206ENST00000462743 OLFM4Q6UX06 510 aa15.32■□□□□ 0.04
HPS1-206ENST00000462743 UBE3BQ7Z3V4 1068 aa15.32■□□□□ 0.04
HPS1-206ENST00000462743 BCL2L13Q9BXK5 485 aa15.32■□□□□ 0.04
HPS1-206ENST00000462743 TMX4Q9H1E5 349 aaPredicted RBP15.32■□□□□ 0.04
HPS1-206ENST00000462743 VPS33BQ9H267 617 aa15.32■□□□□ 0.04
HPS1-206ENST00000462743 UTYO14607 1347 aa15.32■□□□□ 0.04
HPS1-206ENST00000462743 GRM8O00222 908 aa15.31■□□□□ 0.04
HPS1-206ENST00000462743 CTSWP56202 376 aa15.31■□□□□ 0.04
HPS1-206ENST00000462743 SLC4A10Q6U841 1118 aa15.31■□□□□ 0.04
HPS1-206ENST00000462743 CELF1Q92879 486 aaKnown RBP15.31■□□□□ 0.04
HPS1-206ENST00000462743 RTFDC1Q9BY42 306 aaPredicted RBP15.31■□□□□ 0.04
HPS1-206ENST00000462743 NOB1Q9ULX3 412 aaKnown RBP15.31■□□□□ 0.04
HPS1-206ENST00000462743 GOLGB1Q14789 3259 aaKnown RBP15.31■□□□□ 0.04
HPS1-206ENST00000462743 API5Q9BZZ5 524 aaKnown RBP15.3■□□□□ 0.04
HPS1-206ENST00000462743 SEC31BQ9NQW1 1179 aa15.3■□□□□ 0.04
HPS1-206ENST00000462743 KIF16BQ96L93 1317 aa15.29■□□□□ 0.04
HPS1-206ENST00000462743 IPO8O15397 1037 aaKnown RBP15.29■□□□□ 0.04
HPS1-206ENST00000462743 C9orf78Q9NZ63 289 aaPredicted RBP15.29■□□□□ 0.04
HPS1-206ENST00000462743 CCT4P50991 539 aaKnown RBP15.28■□□□□ 0.04
HPS1-206ENST00000462743 FOXO4P98177 505 aa15.28■□□□□ 0.04
HPS1-206ENST00000462743 MPNDQ8N594 471 aa15.28■□□□□ 0.04
HPS1-206ENST00000462743 SUPT20HQ8NEM7 779 aa15.28■□□□□ 0.04
HPS1-206ENST00000462743 IARSP41252 1262 aaKnown RBP15.27■□□□□ 0.04
HPS1-206ENST00000462743 CDC5LQ99459 802 aaKnown RBP15.27■□□□□ 0.04
HPS1-206ENST00000462743 USP44Q9H0E7 712 aa15.27■□□□□ 0.04
HPS1-206ENST00000462743 PODXL2Q9NZ53 605 aa15.27■□□□□ 0.04
HPS1-206ENST00000462743 LRRC37AA6NMS7 1700 aa15.26■□□□□ 0.03
HPS1-206ENST00000462743 GLTPD2A6NH11 291 aa15.26■□□□□ 0.03
HPS1-206ENST00000462743 BCAR3O75815 825 aa15.26■□□□□ 0.03
HPS1-206ENST00000462743 ANKRD18AQ8IVF6 992 aa15.26■□□□□ 0.03
HPS1-206ENST00000462743 KAZALD1Q96I82 304 aa15.26■□□□□ 0.03
HPS1-206ENST00000462743 GREM2Q9H772 168 aa15.26■□□□□ 0.03
HPS1-206ENST00000462743 ZNF277Q9NRM2 450 aaPredicted RBP15.26■□□□□ 0.03
HPS1-206ENST00000462743 BSDC1Q9NW68 430 aaPredicted RBP15.26■□□□□ 0.03
HPS1-206ENST00000462743 FZD9O00144 591 aa15.25■□□□□ 0.03
HPS1-206ENST00000462743 NBPF7P0C2Y1 421 aaPredicted RBP15.25■□□□□ 0.03
HPS1-206ENST00000462743 EPHA10Q5JZY3 1008 aa15.25■□□□□ 0.03
HPS1-206ENST00000462743 INTS3Q68E01 1043 aaKnown RBP15.25■□□□□ 0.03
HPS1-206ENST00000462743 DPY19L2Q6NUT2 758 aa15.25■□□□□ 0.03
HPS1-206ENST00000462743 DPP8Q6V1X1 898 aaPredicted RBP15.25■□□□□ 0.03
HPS1-206ENST00000462743 GPBP1L1Q9HC44 474 aaPredicted RBP15.25■□□□□ 0.03
HPS1-206ENST00000462743 KDM2BQ8NHM5 1336 aa15.24■□□□□ 0.03
HPS1-206ENST00000462743 ITGA6P23229 1130 aa15.24■□□□□ 0.03
HPS1-206ENST00000462743 RABL6Q3YEC7 729 aaPredicted RBP15.24■□□□□ 0.03
HPS1-206ENST00000462743 ATF7IPQ6VMQ6 1270 aa15.24■□□□□ 0.03
HPS1-206ENST00000462743 SLC51AQ86UW1 340 aa15.24■□□□□ 0.03
HPS1-206ENST00000462743 CCDC85AQ96PX6 553 aaPredicted RBP15.24■□□□□ 0.03
HPS1-206ENST00000462743 COL4A1P02462 1669 aa15.24■□□□□ 0.03
HPS1-206ENST00000462743 ANKRD18BA2A2Z9 1011 aa15.23■□□□□ 0.03
HPS1-206ENST00000462743 GPSM2P81274 684 aa15.23■□□□□ 0.03
HPS1-206ENST00000462743 KIAA2012Q0VF49 1180 aa15.23■□□□□ 0.03
HPS1-206ENST00000462743 LMBR1LQ6UX01 489 aa15.23■□□□□ 0.03
HPS1-206ENST00000462743 JDP2Q8WYK2 163 aa15.23■□□□□ 0.03
HPS1-206ENST00000462743 SUCLG2Q96I99 432 aa15.23■□□□□ 0.03
HPS1-206ENST00000462743 NSFL1CQ9UNZ2 370 aaKnown RBP15.23■□□□□ 0.03
HPS1-206ENST00000462743 TRIM27P14373 513 aa15.22■□□□□ 0.03
HPS1-206ENST00000462743 IGHMBP2P38935 993 aaKnown RBP15.22■□□□□ 0.03
HPS1-206ENST00000462743 IFIT5Q13325 482 aaKnown RBP15.22■□□□□ 0.03
HPS1-206ENST00000462743 FAM161AQ3B820 660 aa15.22■□□□□ 0.03
HPS1-206ENST00000462743 ZKSCAN2Q63HK3 967 aa15.22■□□□□ 0.03
HPS1-206ENST00000462743 LARGE2Q8N3Y3 721 aa15.22■□□□□ 0.03
HPS1-206ENST00000462743 POLLQ9UGP5 575 aa15.22■□□□□ 0.03
HPS1-206ENST00000462743 MINPP1Q9UNW1 487 aa15.22■□□□□ 0.03
HPS1-206ENST00000462743 HDAC5Q9UQL6 1122 aa15.22■□□□□ 0.03
HPS1-206ENST00000462743 LTBP1Q14766 1721 aa15.21■□□□□ 0.03
HPS1-206ENST00000462743 KIF3CO14782 793 aa15.21■□□□□ 0.03
HPS1-206ENST00000462743 TBC1D16Q8TBP0 767 aa15.21■□□□□ 0.03
HPS1-206ENST00000462743 XDHP47989 1333 aa15.2■□□□□ 0.02
HPS1-206ENST00000462743 POTECB2RU33 542 aa15.2■□□□□ 0.02
HPS1-206ENST00000462743 PPIP5K2O43314 1243 aa15.2■□□□□ 0.02
HPS1-206ENST00000462743 ATP2B4P23634 1241 aa15.2■□□□□ 0.02
HPS1-206ENST00000462743 WASHC4Q2M389 1173 aa15.2■□□□□ 0.02
HPS1-206ENST00000462743 CCDC57Q2TAC2 916 aa15.2■□□□□ 0.02
HPS1-206ENST00000462743 ANKRD44Q8N8A2 993 aa15.2■□□□□ 0.02
HPS1-206ENST00000462743 EYA3Q99504 573 aa15.2■□□□□ 0.02
HPS1-206ENST00000462743 MPHOSPH8Q99549 860 aa15.2■□□□□ 0.02
HPS1-206ENST00000462743 ANKRD2Q9GZV1 360 aa15.2■□□□□ 0.02
HPS1-206ENST00000462743 ZNRF3Q9ULT6 936 aa15.2■□□□□ 0.02
HPS1-206ENST00000462743 TIAM2Q8IVF5 1701 aa15.2■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms