RNA–Protein interactions for RNA: ENST00000462723.1

RPA3-205, Transcript of replication protein A3, humanhuman

TSL 2

Gene RPA3, Length 989 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPA3-205ENST00000462723 RPAP2Q8IXW5 612 aaPredicted RBP10.24□□□□□ -0.77
RPA3-205ENST00000462723 FBXO22Q8NEZ5 403 aa10.24□□□□□ -0.77
RPA3-205ENST00000462723 MYD88Q99836 296 aa10.24□□□□□ -0.77
RPA3-205ENST00000462723 USP44Q9H0E7 712 aa10.24□□□□□ -0.77
RPA3-205ENST00000462723 C9orf78Q9NZ63 289 aaPredicted RBP10.24□□□□□ -0.77
RPA3-205ENST00000462723 RREB1Q92766 1687 aa10.24□□□□□ -0.77
RPA3-205ENST00000462723 COL5A3P25940 1745 aaPredicted RBP10.24□□□□□ -0.77
RPA3-205ENST00000462723 AFDNP55196 1824 aaKnown RBP10.23□□□□□ -0.77
RPA3-205ENST00000462723 HMMRO75330 724 aa10.23□□□□□ -0.77
RPA3-205ENST00000462723 CRKLP46109 303 aaKnown RBP10.23□□□□□ -0.77
RPA3-205ENST00000462723 PSEN2P49810 448 aa10.23□□□□□ -0.77
RPA3-205ENST00000462723 ITPK1Q13572 414 aa10.23□□□□□ -0.77
RPA3-205ENST00000462723 TTLL7Q6ZT98 887 aa10.23□□□□□ -0.77
RPA3-205ENST00000462723 PTF1AQ7RTS3 328 aa10.23□□□□□ -0.77
RPA3-205ENST00000462723 ANKRD44Q8N8A2 993 aa10.23□□□□□ -0.77
RPA3-205ENST00000462723 ZBTB1Q9Y2K1 713 aa10.23□□□□□ -0.77
RPA3-205ENST00000462723 LY75O60449 1722 aa10.23□□□□□ -0.77
RPA3-205ENST00000462723 NEURL1BA8MQ27 555 aa10.22□□□□□ -0.77
RPA3-205ENST00000462723 GRM8O00222 908 aa10.22□□□□□ -0.77
RPA3-205ENST00000462723 CWF19L2Q2TBE0 894 aaKnown RBP10.22□□□□□ -0.77
RPA3-205ENST00000462723 CEP85Q6P2H3 762 aa10.22□□□□□ -0.77
RPA3-205ENST00000462723 INTS5Q6P9B9 1019 aaKnown RBP10.22□□□□□ -0.77
RPA3-205ENST00000462723 ARXQ96QS3 562 aa10.22□□□□□ -0.77
RPA3-205ENST00000462723 MFRPQ9BY79 579 aa10.22□□□□□ -0.77
RPA3-205ENST00000462723 ZBTB3Q9H5J0 574 aa10.22□□□□□ -0.77
RPA3-205ENST00000462723 RGS17Q9UGC6 210 aaPredicted RBP10.22□□□□□ -0.77
RPA3-205ENST00000462723 CCNL1Q9UK58 526 aaPredicted RBP10.22□□□□□ -0.77
RPA3-205ENST00000462723 MYH14Q7Z406 1995 aaKnown RBP10.21□□□□□ -0.77
RPA3-205ENST00000462723 IGKV5-2P06315 115 aa10.21□□□□□ -0.77
RPA3-205ENST00000462723 NBPF7P0C2Y1 421 aaPredicted RBP10.21□□□□□ -0.77
RPA3-205ENST00000462723 HMGB2P26583 209 aaKnown RBP10.21□□□□□ -0.77
RPA3-205ENST00000462723 EIF5P55010 431 aaKnown RBP10.21□□□□□ -0.77
RPA3-205ENST00000462723 GCKRQ14397 625 aa10.21□□□□□ -0.77
RPA3-205ENST00000462723 HSP90AB3PQ58FF7 597 aa10.21□□□□□ -0.77
RPA3-205ENST00000462723 SIRT2Q8IXJ6 389 aa10.21□□□□□ -0.77
RPA3-205ENST00000462723 SMC5Q8IY18 1101 aa10.21□□□□□ -0.77
RPA3-205ENST00000462723 GCC1Q96CN9 775 aa10.21□□□□□ -0.77
RPA3-205ENST00000462723 LRRFIP2Q9Y608 721 aaKnown RBP10.21□□□□□ -0.77
RPA3-205ENST00000462723 MAP3K15Q6ZN16 1313 aa10.21□□□□□ -0.78
RPA3-205ENST00000462723 CNTNAP4Q9C0A0 1308 aa10.21□□□□□ -0.78
RPA3-205ENST00000462723 A0A087WZG4 1122 aa10.2□□□□□ -0.78
RPA3-205ENST00000462723 ATP5J2-PTCD1G3V325 749 aa10.2□□□□□ -0.78
RPA3-205ENST00000462723 UTYO14607 1347 aa10.2□□□□□ -0.78
RPA3-205ENST00000462723 TRIM37O94972 964 aa10.2□□□□□ -0.78
RPA3-205ENST00000462723 TCIRG1Q13488 830 aa10.2□□□□□ -0.78
RPA3-205ENST00000462723 POTEAQ6S8J7 498 aa10.2□□□□□ -0.78
RPA3-205ENST00000462723 DZIP3Q86Y13 1208 aaKnown RBP10.2□□□□□ -0.78
RPA3-205ENST00000462723 TAF1LQ8IZX4 1826 aa10.2□□□□□ -0.78
RPA3-205ENST00000462723 LINC00116Q8NCU8 138 aa10.2□□□□□ -0.78
RPA3-205ENST00000462723 TSHZ2Q9NRE2 1034 aa10.2□□□□□ -0.78
RPA3-205ENST00000462723 CWC25Q9NXE8 425 aaPredicted RBP10.2□□□□□ -0.78
RPA3-205ENST00000462723 ANKRD36CQ5JPF3 1778 aa10.19□□□□□ -0.78
RPA3-205ENST00000462723 ERVV-1B6SEH8 477 aa10.19□□□□□ -0.78
RPA3-205ENST00000462723 ATP8B2P98198 1209 aa10.19□□□□□ -0.78
RPA3-205ENST00000462723 RC3H1Q5TC82 1133 aaKnown RBP10.19□□□□□ -0.78
RPA3-205ENST00000462723 GIGYF2Q6Y7W6 1299 aaKnown RBP10.19□□□□□ -0.78
RPA3-205ENST00000462723 CCDC191Q8NCU4 936 aa10.19□□□□□ -0.78
RPA3-205ENST00000462723 NUP98P52948 1817 aa10.19□□□□□ -0.78
RPA3-205ENST00000462723 COL15A1P39059 1388 aa10.18□□□□□ -0.78
RPA3-205ENST00000462723 PTPN5P54829 565 aa10.18□□□□□ -0.78
RPA3-205ENST00000462723 KCNQ4P56696 695 aa10.18□□□□□ -0.78
RPA3-205ENST00000462723 TRIM28Q13263 835 aaKnown RBP10.18□□□□□ -0.78
RPA3-205ENST00000462723 SLC27A3Q5K4L6 730 aa10.18□□□□□ -0.78
RPA3-205ENST00000462723 ISCA1Q9BUE6 129 aa10.18□□□□□ -0.78
RPA3-205ENST00000462723 DCTPP1Q9H773 170 aa10.18□□□□□ -0.78
RPA3-205ENST00000462723 PDZRN3Q9UPQ7 1066 aa10.18□□□□□ -0.78
RPA3-205ENST00000462723 TBC1D2BQ9UPU7 963 aa10.18□□□□□ -0.78
RPA3-205ENST00000462723 C4BP0C0L5 1744 aa10.17□□□□□ -0.78
RPA3-205ENST00000462723 RPS6KA4O75676 772 aa10.17□□□□□ -0.78
RPA3-205ENST00000462723 NUCB1Q02818 461 aa10.17□□□□□ -0.78
RPA3-205ENST00000462723 UBE3BQ7Z3V4 1068 aa10.17□□□□□ -0.78
RPA3-205ENST00000462723 PPP1R42Q7Z4L9 355 aa10.17□□□□□ -0.78
RPA3-205ENST00000462723 ZNF652Q9Y2D9 606 aa10.17□□□□□ -0.78
RPA3-205ENST00000462723 H7C1W4 665 aa10.16□□□□□ -0.78
RPA3-205ENST00000462723 GNPATO15228 680 aa10.16□□□□□ -0.78
RPA3-205ENST00000462723 SRGAP3O43295 1099 aa10.16□□□□□ -0.78
RPA3-205ENST00000462723 RGS3P49796 1198 aa10.16□□□□□ -0.78
RPA3-205ENST00000462723 MTX1Q13505 466 aa10.16□□□□□ -0.78
RPA3-205ENST00000462723 HLFQ16534 295 aa10.16□□□□□ -0.78
RPA3-205ENST00000462723 ANKRD45Q5TZF3 282 aa10.16□□□□□ -0.78
RPA3-205ENST00000462723 CHD1LQ86WJ1 897 aa10.16□□□□□ -0.78
RPA3-205ENST00000462723 SSH3Q8TE77 659 aa10.16□□□□□ -0.78
RPA3-205ENST00000462723 SUCLG2Q96I99 432 aa10.16□□□□□ -0.78
RPA3-205ENST00000462723 AK7Q96M32 723 aa10.16□□□□□ -0.78
RPA3-205ENST00000462723 RTCBQ9Y3I0 505 aaKnown RBP10.16□□□□□ -0.78
RPA3-205ENST00000462723 BCORQ6W2J9 1755 aa10.16□□□□□ -0.78
RPA3-205ENST00000462723 PNMA6EA0A0J9YXQ4 647 aa10.15□□□□□ -0.78
RPA3-205ENST00000462723 PLSCR1O15162 318 aa10.15□□□□□ -0.78
RPA3-205ENST00000462723 GTPBP6O43824 516 aaPredicted RBP10.15□□□□□ -0.78
RPA3-205ENST00000462723 CAMTA2O94983 1202 aa10.15□□□□□ -0.78
RPA3-205ENST00000462723 APBA3O96018 575 aa10.15□□□□□ -0.78
RPA3-205ENST00000462723 BICC1Q9H694 974 aaKnown RBP10.15□□□□□ -0.78
RPA3-205ENST00000462723 TNS1Q9HBL0 1735 aaKnown RBP10.14□□□□□ -0.79
RPA3-205ENST00000462723 PCCAP05165 728 aaPredicted RBP10.14□□□□□ -0.79
RPA3-205ENST00000462723 GPTP24298 496 aa10.14□□□□□ -0.79
RPA3-205ENST00000462723 CASP7P55210 303 aa10.14□□□□□ -0.79
RPA3-205ENST00000462723 TXNRD1Q16881 649 aa10.14□□□□□ -0.79
RPA3-205ENST00000462723 PARP10Q53GL7 1025 aa10.14□□□□□ -0.79
RPA3-205ENST00000462723 HSP90AB4PQ58FF6 505 aa10.14□□□□□ -0.79
RPA3-205ENST00000462723 CLEC4GQ6UXB4 293 aa10.14□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms