RNA–Protein interactions for RNA: ENST00000462335.1

PKP4-208, Transcript of plakophilin 4, humanhuman

TSL 4

Gene PKP4, Length 561 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-208ENST00000462335 GRAPLQ8TC17 118 aaPredicted RBP12.06□□□□□ -0.48
PKP4-208ENST00000462335 CDHR2Q9BYE9 1310 aa12.06□□□□□ -0.48
PKP4-208ENST00000462335 RIC1Q4ADV7 1423 aa12.05□□□□□ -0.48
PKP4-208ENST00000462335 H7C1W4 665 aa12.05□□□□□ -0.48
PKP4-208ENST00000462335 GRM8O00222 908 aa12.05□□□□□ -0.48
PKP4-208ENST00000462335 IGHMBP2P38935 993 aaKnown RBP12.05□□□□□ -0.48
PKP4-208ENST00000462335 CTSWP56202 376 aa12.05□□□□□ -0.48
PKP4-208ENST00000462335 RPS8P62241 208 aaKnown RBP12.05□□□□□ -0.48
PKP4-208ENST00000462335 DPP8Q6V1X1 898 aaPredicted RBP12.05□□□□□ -0.48
PKP4-208ENST00000462335 C3orf67Q6ZVT6 689 aa12.05□□□□□ -0.48
PKP4-208ENST00000462335 ZNF526Q8TF50 670 aaPredicted RBP12.05□□□□□ -0.48
PKP4-208ENST00000462335 MPHOSPH8Q99549 860 aa12.05□□□□□ -0.48
PKP4-208ENST00000462335 CACNA1SQ13698 1873 aa12.05□□□□□ -0.48
PKP4-208ENST00000462335 ABCC4O15439 1325 aa12.05□□□□□ -0.48
PKP4-208ENST00000462335 RASSF7Q02833 373 aa12.04□□□□□ -0.48
PKP4-208ENST00000462335 CCDC57Q2TAC2 916 aa12.04□□□□□ -0.48
PKP4-208ENST00000462335 ZKSCAN2Q63HK3 967 aa12.04□□□□□ -0.48
PKP4-208ENST00000462335 DPY19L2Q6NUT2 758 aa12.04□□□□□ -0.48
PKP4-208ENST00000462335 SP8Q8IXZ3 490 aa12.04□□□□□ -0.48
PKP4-208ENST00000462335 MPNDQ8N594 471 aa12.04□□□□□ -0.48
PKP4-208ENST00000462335 JDP2Q8WYK2 163 aa12.04□□□□□ -0.48
PKP4-208ENST00000462335 ARHGAP45Q92619 1136 aa12.04□□□□□ -0.48
PKP4-208ENST00000462335 ANKIB1Q9P2G1 1089 aa12.04□□□□□ -0.48
PKP4-208ENST00000462335 ATP6V0A2Q9Y487 856 aa12.04□□□□□ -0.48
PKP4-208ENST00000462335 ARFGEF1Q9Y6D6 1849 aa12.04□□□□□ -0.48
PKP4-208ENST00000462335 DLEC1Q9Y238 1755 aa12.03□□□□□ -0.48
PKP4-208ENST00000462335 SLX4Q8IY92 1834 aa12.03□□□□□ -0.48
PKP4-208ENST00000462335 ANKRD18BA2A2Z9 1011 aa12.03□□□□□ -0.48
PKP4-208ENST00000462335 C6orf229H3BNL8 230 aa12.03□□□□□ -0.48
PKP4-208ENST00000462335 BCAR3O75815 825 aa12.03□□□□□ -0.48
PKP4-208ENST00000462335 MS4A1P11836 297 aa12.03□□□□□ -0.48
PKP4-208ENST00000462335 FKBP4Q02790 459 aaKnown RBP eCLIP12.03□□□□□ -0.48
PKP4-208ENST00000462335 IFIT5Q13325 482 aaKnown RBP12.03□□□□□ -0.48
PKP4-208ENST00000462335 GOLGA6L2Q8N9W4 650 aaPredicted RBP12.03□□□□□ -0.48
PKP4-208ENST00000462335 GPBP1L1Q9HC44 474 aaPredicted RBP12.03□□□□□ -0.48
PKP4-208ENST00000462335 NSFL1CQ9UNZ2 370 aaKnown RBP12.03□□□□□ -0.48
PKP4-208ENST00000462335 KIAA1551Q9HCM1 1747 aa12.03□□□□□ -0.48
PKP4-208ENST00000462335 BRCA1P38398 1863 aaKnown RBP12.02□□□□□ -0.48
PKP4-208ENST00000462335 UBTFL1P0CB47 393 aaPredicted RBP12.02□□□□□ -0.49
PKP4-208ENST00000462335 BRPF1P55201 1214 aaPredicted RBP12.02□□□□□ -0.49
PKP4-208ENST00000462335 ATF7IPQ6VMQ6 1270 aa12.02□□□□□ -0.49
PKP4-208ENST00000462335 LARGE2Q8N3Y3 721 aa12.02□□□□□ -0.49
PKP4-208ENST00000462335 TTLL11Q8NHH1 800 aa12.02□□□□□ -0.49
PKP4-208ENST00000462335 ZNF277Q9NRM2 450 aaPredicted RBP12.02□□□□□ -0.49
PKP4-208ENST00000462335 KDM2BQ8NHM5 1336 aa12.02□□□□□ -0.49
PKP4-208ENST00000462335 COL11A2P13942 1736 aaPredicted RBP12.01□□□□□ -0.49
PKP4-208ENST00000462335 KCNJ4P48050 445 aa12.01□□□□□ -0.49
PKP4-208ENST00000462335 LMBR1LQ6UX01 489 aa12.01□□□□□ -0.49
PKP4-208ENST00000462335 OLFM4Q6UX06 510 aa12.01□□□□□ -0.49
PKP4-208ENST00000462335 C16orf71Q8IYS4 520 aaPredicted RBP12.01□□□□□ -0.49
PKP4-208ENST00000462335 C7orf43Q8WVR3 580 aa12.01□□□□□ -0.49
PKP4-208ENST00000462335 CELF1Q92879 486 aaKnown RBP12.01□□□□□ -0.49
PKP4-208ENST00000462335 CLUAP1Q96AJ1 413 aa12.01□□□□□ -0.49
PKP4-208ENST00000462335 EYA3Q99504 573 aa12.01□□□□□ -0.49
PKP4-208ENST00000462335 GREM2Q9H772 168 aa12.01□□□□□ -0.49
PKP4-208ENST00000462335 SEC31BQ9NQW1 1179 aa12.01□□□□□ -0.49
PKP4-208ENST00000462335 RCAN3Q9UKA8 241 aa12.01□□□□□ -0.49
PKP4-208ENST00000462335 NFKBIEO00221 500 aa12□□□□□ -0.49
PKP4-208ENST00000462335 PPIP5K2O43314 1243 aa12□□□□□ -0.49
PKP4-208ENST00000462335 GNAI3P08754 354 aa12□□□□□ -0.49
PKP4-208ENST00000462335 ITGA6P23229 1130 aa12□□□□□ -0.49
PKP4-208ENST00000462335 IARSP41252 1262 aaKnown RBP12□□□□□ -0.49
PKP4-208ENST00000462335 EIF6P56537 245 aaKnown RBP12□□□□□ -0.49
PKP4-208ENST00000462335 NIM1KQ8IY84 436 aa12□□□□□ -0.49
PKP4-208ENST00000462335 PSMD1Q99460 953 aa12□□□□□ -0.49
PKP4-208ENST00000462335 PLA2G12BQ9BX93 195 aa12□□□□□ -0.49
PKP4-208ENST00000462335 CNNM1Q9NRU3 951 aa12□□□□□ -0.49
PKP4-208ENST00000462335 GOLGB1Q14789 3259 aaKnown RBP12□□□□□ -0.49
PKP4-208ENST00000462335 TNRC6CQ9HCJ0 1690 aaKnown RBP12□□□□□ -0.49
PKP4-208ENST00000462335 DZIP1LQ8IYY4 767 aaKnown RBP11.99□□□□□ -0.49
PKP4-208ENST00000462335 ZNF784Q8NCA9 323 aaPredicted RBP11.99□□□□□ -0.49
PKP4-208ENST00000462335 ZC3H12CQ9C0D7 883 aaKnown RBP11.99□□□□□ -0.49
PKP4-208ENST00000462335 GGA1Q9UJY5 639 aa11.99□□□□□ -0.49
PKP4-208ENST00000462335 LTBP3Q9NS15 1303 aa11.99□□□□□ -0.49
PKP4-208ENST00000462335 ZC3H4Q9UPT8 1303 aaKnown RBP11.98□□□□□ -0.49
PKP4-208ENST00000462335 RIMBP2O15034 1052 aa11.98□□□□□ -0.49
PKP4-208ENST00000462335 NBPF7P0C2Y1 421 aaPredicted RBP11.98□□□□□ -0.49
PKP4-208ENST00000462335 WASHC4Q2M389 1173 aa11.98□□□□□ -0.49
PKP4-208ENST00000462335 FAM161AQ3B820 660 aa11.98□□□□□ -0.49
PKP4-208ENST00000462335 LDHAL6AQ6ZMR3 332 aa11.98□□□□□ -0.49
PKP4-208ENST00000462335 ITPRIPQ8IWB1 547 aa11.98□□□□□ -0.49
PKP4-208ENST00000462335 ANKRD2Q9GZV1 360 aa11.98□□□□□ -0.49
PKP4-208ENST00000462335 VPS33BQ9H267 617 aa11.98□□□□□ -0.49
PKP4-208ENST00000462335 BSDC1Q9NW68 430 aaPredicted RBP11.98□□□□□ -0.49
PKP4-208ENST00000462335 CCDC88AQ3V6T2 1871 aa11.97□□□□□ -0.49
PKP4-208ENST00000462335 LAMB2P55268 1798 aa11.97□□□□□ -0.49
PKP4-208ENST00000462335 DDX60Q8IY21 1712 aaKnown RBP11.97□□□□□ -0.49
PKP4-208ENST00000462335 PLIN1O60240 522 aa11.97□□□□□ -0.49
PKP4-208ENST00000462335 UFL1O94874 794 aa11.97□□□□□ -0.49
PKP4-208ENST00000462335 CSF1RP07333 972 aa11.97□□□□□ -0.49
PKP4-208ENST00000462335 TRIM27P14373 513 aa11.97□□□□□ -0.49
PKP4-208ENST00000462335 ATP2B4P23634 1241 aa11.97□□□□□ -0.49
PKP4-208ENST00000462335 SUCLG2Q96I99 432 aa11.97□□□□□ -0.49
PKP4-208ENST00000462335 USP44Q9H0E7 712 aa11.97□□□□□ -0.49
PKP4-208ENST00000462335 CHMP4BQ9H444 224 aaKnown RBP11.97□□□□□ -0.49
PKP4-208ENST00000462335 MYH3P11055 1940 aa11.97□□□□□ -0.49
PKP4-208ENST00000462335 RTL9Q8NET4 1388 aa11.96□□□□□ -0.49
PKP4-208ENST00000462335 XDHP47989 1333 aa11.96□□□□□ -0.49
PKP4-208ENST00000462335 CASP7P55210 303 aa11.96□□□□□ -0.49
PKP4-208ENST00000462335 GPSM2P81274 684 aa11.96□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 844.9 ms