RNA–Protein interactions for RNA: ENST00000462130.1

HDLBP-230, Transcript of high density lipoprotein binding protein, humanhuman

TSL 4

Gene HDLBP, Length 464 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-230ENST00000462130 ADAMTS8Q9UP79 889 aa13.18□□□□□ -0.3
HDLBP-230ENST00000462130 COL4A5P29400 1685 aa13.18□□□□□ -0.3
HDLBP-230ENST00000462130 PPIP5K2O43314 1243 aa13.17□□□□□ -0.3
HDLBP-230ENST00000462130 TMPOP42166 694 aaKnown RBP13.17□□□□□ -0.3
HDLBP-230ENST00000462130 AIMP1Q12904 312 aaKnown RBP13.17□□□□□ -0.3
HDLBP-230ENST00000462130 PDIA6Q15084 440 aa13.17□□□□□ -0.3
HDLBP-230ENST00000462130 NEUROD2Q15784 382 aa13.17□□□□□ -0.3
HDLBP-230ENST00000462130 DEFB115Q30KQ5 88 aa13.17□□□□□ -0.3
HDLBP-230ENST00000462130 HSP90AB3PQ58FF7 597 aa13.17□□□□□ -0.3
HDLBP-230ENST00000462130 C3orf67Q6ZVT6 689 aa13.17□□□□□ -0.3
HDLBP-230ENST00000462130 ABT1Q9ULW3 272 aaKnown RBP13.17□□□□□ -0.3
HDLBP-230ENST00000462130 TAF1P21675 1872 aa13.16□□□□□ -0.3
HDLBP-230ENST00000462130 LTBP1Q14766 1721 aa13.16□□□□□ -0.3
HDLBP-230ENST00000462130 FOXN1O15353 648 aa13.16□□□□□ -0.3
HDLBP-230ENST00000462130 WDR43Q15061 677 aaKnown RBP eCLIP13.16□□□□□ -0.3
HDLBP-230ENST00000462130 PROSER3Q2NL68 480 aa13.16□□□□□ -0.3
HDLBP-230ENST00000462130 SLC10A5Q5PT55 438 aa13.16□□□□□ -0.3
HDLBP-230ENST00000462130 DIEXFQ68CQ4 756 aaKnown RBP13.16□□□□□ -0.3
HDLBP-230ENST00000462130 COPS6Q7L5N1 327 aa13.16□□□□□ -0.3
HDLBP-230ENST00000462130 ATP6V0A2Q9Y487 856 aa13.16□□□□□ -0.3
HDLBP-230ENST00000462130 EPS15P42566 896 aa13.15□□□□□ -0.3
HDLBP-230ENST00000462130 SCNN1DP51172 638 aa13.15□□□□□ -0.3
HDLBP-230ENST00000462130 AOC3Q16853 763 aa13.15□□□□□ -0.3
HDLBP-230ENST00000462130 LRP10Q7Z4F1 713 aa13.15□□□□□ -0.3
HDLBP-230ENST00000462130 SLC51AQ86UW1 340 aa13.15□□□□□ -0.3
HDLBP-230ENST00000462130 CCDC146Q8IYE0 955 aa13.15□□□□□ -0.3
HDLBP-230ENST00000462130 SUPT20HQ8NEM7 779 aa13.15□□□□□ -0.3
HDLBP-230ENST00000462130 XAGE3Q8WTP9 111 aa13.15□□□□□ -0.3
HDLBP-230ENST00000462130 MRS2Q9HD23 443 aa13.15□□□□□ -0.3
HDLBP-230ENST00000462130 LAS1LQ9Y4W2 734 aaKnown RBP13.15□□□□□ -0.3
HDLBP-230ENST00000462130 ABCC4O15439 1325 aa13.14□□□□□ -0.31
HDLBP-230ENST00000462130 RASSF10A6NK89 507 aa13.14□□□□□ -0.31
HDLBP-230ENST00000462130 SPDYE4A6NLX3 237 aa13.14□□□□□ -0.31
HDLBP-230ENST00000462130 BBOX1O75936 387 aa13.14□□□□□ -0.31
HDLBP-230ENST00000462130 HCLS1P14317 486 aaPredicted RBP13.14□□□□□ -0.31
HDLBP-230ENST00000462130 CTCFP49711 727 aaPredicted RBP13.14□□□□□ -0.31
HDLBP-230ENST00000462130 DPP8Q6V1X1 898 aaPredicted RBP13.14□□□□□ -0.31
HDLBP-230ENST00000462130 PAXIP1Q6ZW49 1069 aaPredicted RBP13.14□□□□□ -0.31
HDLBP-230ENST00000462130 USP50Q70EL3 339 aaPredicted RBP13.14□□□□□ -0.31
HDLBP-230ENST00000462130 DDX46Q7L014 1031 aaKnown RBP13.14□□□□□ -0.31
HDLBP-230ENST00000462130 NLRP10Q86W26 655 aa13.14□□□□□ -0.31
HDLBP-230ENST00000462130 VPS33BQ9H267 617 aa13.14□□□□□ -0.31
HDLBP-230ENST00000462130 DDX21Q9NR30 783 aaKnown RBP eCLIP13.14□□□□□ -0.31
HDLBP-230ENST00000462130 TRMT112Q9UI30 125 aaKnown RBP13.14□□□□□ -0.31
HDLBP-230ENST00000462130 TCIRG1Q13488 830 aa13.13□□□□□ -0.31
HDLBP-230ENST00000462130 SP8Q8IXZ3 490 aa13.13□□□□□ -0.31
HDLBP-230ENST00000462130 MPNDQ8N594 471 aa13.13□□□□□ -0.31
HDLBP-230ENST00000462130 PRDM10Q9NQV6 1147 aa13.13□□□□□ -0.31
HDLBP-230ENST00000462130 SH3TC1Q8TE82 1336 aa13.13□□□□□ -0.31
HDLBP-230ENST00000462130 WDR33Q9C0J8 1336 aaKnown RBP13.13□□□□□ -0.31
HDLBP-230ENST00000462130 ADARB2Q9NS39 739 aaKnown RBP13.12□□□□□ -0.31
HDLBP-230ENST00000462130 WBP1LQ9NX94 342 aa13.12□□□□□ -0.31
HDLBP-230ENST00000462130 ZNRF3Q9ULT6 936 aa13.12□□□□□ -0.31
HDLBP-230ENST00000462130 DDX60Q8IY21 1712 aaKnown RBP13.11□□□□□ -0.31
HDLBP-230ENST00000462130 MAP2K1Q02750 393 aaPredicted RBP13.11□□□□□ -0.31
HDLBP-230ENST00000462130 FMR1Q06787 632 aaKnown RBP eCLIP13.11□□□□□ -0.314e-8■■■□□ 16.1
HDLBP-230ENST00000462130 CXCL9Q07325 125 aa13.11□□□□□ -0.31
HDLBP-230ENST00000462130 GRM1Q13255 1194 aa13.11□□□□□ -0.31
HDLBP-230ENST00000462130 KRT24Q2M2I5 525 aa13.11□□□□□ -0.31
HDLBP-230ENST00000462130 MIER1Q8N108 512 aa13.11□□□□□ -0.31
HDLBP-230ENST00000462130 ZNF428Q96B54 188 aa13.11□□□□□ -0.31
HDLBP-230ENST00000462130 RUNDC1Q96C34 613 aa13.11□□□□□ -0.31
HDLBP-230ENST00000462130 BCL2L13Q9BXK5 485 aa13.11□□□□□ -0.31
HDLBP-230ENST00000462130 RTFDC1Q9BY42 306 aaPredicted RBP13.11□□□□□ -0.31
HDLBP-230ENST00000462130 GPRC5DQ9NZD1 345 aa13.11□□□□□ -0.31
HDLBP-230ENST00000462130 CHPF2Q9P2E5 772 aa13.11□□□□□ -0.31
HDLBP-230ENST00000462130 CHL1O00533 1208 aa13.1□□□□□ -0.31
HDLBP-230ENST00000462130 ECE1P42892 770 aa13.1□□□□□ -0.31
HDLBP-230ENST00000462130 LBX1P52954 281 aa13.1□□□□□ -0.31
HDLBP-230ENST00000462130 GRAPQ13588 217 aa13.1□□□□□ -0.31
HDLBP-230ENST00000462130 HDGFL1Q5TGJ6 251 aa13.1□□□□□ -0.31
HDLBP-230ENST00000462130 CIAPIN1Q6FI81 312 aa13.1□□□□□ -0.31
HDLBP-230ENST00000462130 ZNF579Q8NAF0 562 aaKnown RBP13.1□□□□□ -0.31
HDLBP-230ENST00000462130 GRAPLQ8TC17 118 aaPredicted RBP13.1□□□□□ -0.31
HDLBP-230ENST00000462130 TRAF5O00463 557 aa13.09□□□□□ -0.31
HDLBP-230ENST00000462130 RAD17O75943 681 aa13.09□□□□□ -0.31
HDLBP-230ENST00000462130 GMPSP49915 693 aaPredicted RBP13.09□□□□□ -0.31
HDLBP-230ENST00000462130 KIAA2012Q0VF49 1180 aa13.09□□□□□ -0.31
HDLBP-230ENST00000462130 TNIP1Q15025 636 aa13.09□□□□□ -0.31
HDLBP-230ENST00000462130 ANKRD13DQ6ZTN6 518 aa13.09□□□□□ -0.31
HDLBP-230ENST00000462130 TMC4Q7Z404 712 aa13.09□□□□□ -0.31
HDLBP-230ENST00000462130 FAM9BQ8IZU0 186 aa13.09□□□□□ -0.31
HDLBP-230ENST00000462130 PLBD2Q8NHP8 589 aa13.09□□□□□ -0.31
HDLBP-230ENST00000462130 CAPNS2Q96L46 248 aa13.09□□□□□ -0.31
HDLBP-230ENST00000462130 BEGAINQ9BUH8 593 aa13.09□□□□□ -0.31
HDLBP-230ENST00000462130 TRIM35Q9UPQ4 493 aa13.09□□□□□ -0.31
HDLBP-230ENST00000462130 POLR2AP24928 1970 aaKnown RBP13.09□□□□□ -0.31
HDLBP-230ENST00000462130 CYP4F22Q6NT55 531 aa13.08□□□□□ -0.32
HDLBP-230ENST00000462130 DBF4Q9UBU7 674 aaPredicted RBP13.08□□□□□ -0.32
HDLBP-230ENST00000462130 LRRC37AA6NMS7 1700 aa13.08□□□□□ -0.32
HDLBP-230ENST00000462130 ATP5J2-PTCD1G3V325 749 aa13.07□□□□□ -0.32
HDLBP-230ENST00000462130 HOXB7P09629 217 aa13.07□□□□□ -0.32
HDLBP-230ENST00000462130 HSPA8P11142 646 aaKnown RBP13.07□□□□□ -0.32
HDLBP-230ENST00000462130 CST9Q5W186 159 aa13.07□□□□□ -0.32
HDLBP-230ENST00000462130 FAM89AQ96GI7 184 aa13.07□□□□□ -0.32
HDLBP-230ENST00000462130 GPR101Q96P66 508 aaPredicted RBP13.07□□□□□ -0.32
HDLBP-230ENST00000462130 DCBLD2Q96PD2 775 aa13.07□□□□□ -0.32
HDLBP-230ENST00000462130 NSFL1CQ9UNZ2 370 aaKnown RBP13.07□□□□□ -0.32
HDLBP-230ENST00000462130 CDHR2Q9BYE9 1310 aa13.07□□□□□ -0.32
HDLBP-230ENST00000462130 H7C1D1 291 aa13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 65.4 ms