RNA–Protein interactions for RNA: ENST00000460211.5

ATG4B-213, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 2

Gene ATG4B, Length 871 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-213ENST00000460211 C7orf43Q8WVR3 580 aa19.07■□□□□ 0.64
ATG4B-213ENST00000460211 ZNF428Q96B54 188 aa19.07■□□□□ 0.64
ATG4B-213ENST00000460211 GRIPAP1Q4V328 841 aa19.06■□□□□ 0.64
ATG4B-213ENST00000460211 DDX46Q7L014 1031 aaKnown RBP19.06■□□□□ 0.64
ATG4B-213ENST00000460211 SYNE4Q8N205 404 aa19.06■□□□□ 0.64
ATG4B-213ENST00000460211 IRS4O14654 1257 aaPredicted RBP19.05■□□□□ 0.64
ATG4B-213ENST00000460211 PCCAP05165 728 aaPredicted RBP19.05■□□□□ 0.64
ATG4B-213ENST00000460211 RTL5Q5HYW3 569 aaPredicted RBP19.05■□□□□ 0.64
ATG4B-213ENST00000460211 OLFM4Q6UX06 510 aa19.05■□□□□ 0.64
ATG4B-213ENST00000460211 C3orf67Q6ZVT6 689 aa19.05■□□□□ 0.64
ATG4B-213ENST00000460211 ANKRD36CQ5JPF3 1778 aa19.05■□□□□ 0.64
ATG4B-213ENST00000460211 IQCA1LA6NCM1 817 aa19.04■□□□□ 0.64
ATG4B-213ENST00000460211 PPEF1O14829 653 aaPredicted RBP19.04■□□□□ 0.64
ATG4B-213ENST00000460211 BBOX1O75936 387 aa19.04■□□□□ 0.64
ATG4B-213ENST00000460211 EAPPQ56P03 285 aaPredicted RBP19.04■□□□□ 0.64
ATG4B-213ENST00000460211 DNAAF4Q8WXU2 420 aa19.04■□□□□ 0.64
ATG4B-213ENST00000460211 TAF1DQ9H5J8 278 aaPredicted RBP19.04■□□□□ 0.64
ATG4B-213ENST00000460211 ZNF277Q9NRM2 450 aaPredicted RBP19.04■□□□□ 0.64
ATG4B-213ENST00000460211 SCN4AP35499 1836 aa19.04■□□□□ 0.64
ATG4B-213ENST00000460211 ZNF541Q9H0D2 1346 aa19.03■□□□□ 0.64
ATG4B-213ENST00000460211 FOXN1O15353 648 aa19.03■□□□□ 0.64
ATG4B-213ENST00000460211 SF3B3Q15393 1217 aaKnown RBP19.03■□□□□ 0.64
ATG4B-213ENST00000460211 LDHDQ86WU2 507 aa19.03■□□□□ 0.64
ATG4B-213ENST00000460211 CDCA7LQ96GN5 454 aa19.03■□□□□ 0.64
ATG4B-213ENST00000460211 CNTNAP1P78357 1384 aa19.03■□□□□ 0.64
ATG4B-213ENST00000460211 PASKQ96RG2 1323 aa19.02■□□□□ 0.64
ATG4B-213ENST00000460211 FKBP4Q02790 459 aaKnown RBP eCLIP19.02■□□□□ 0.64
ATG4B-213ENST00000460211 CLEC11AQ9Y240 323 aa19.02■□□□□ 0.64
ATG4B-213ENST00000460211 NEURL1BA8MQ27 555 aa19.01■□□□□ 0.63
ATG4B-213ENST00000460211 IGKV5-2P06315 115 aa19.01■□□□□ 0.63
ATG4B-213ENST00000460211 GRAPQ13588 217 aa19.01■□□□□ 0.63
ATG4B-213ENST00000460211 TMC4Q7Z404 712 aa19.01■□□□□ 0.63
ATG4B-213ENST00000460211 LINS1Q8NG48 757 aa19.01■□□□□ 0.63
ATG4B-213ENST00000460211 GRAPLQ8TC17 118 aaPredicted RBP19.01■□□□□ 0.63
ATG4B-213ENST00000460211 L3MBTL3Q96JM7 780 aaPredicted RBP19.01■□□□□ 0.63
ATG4B-213ENST00000460211 ABCC4O15439 1325 aa19■□□□□ 0.63
ATG4B-213ENST00000460211 PDE8AO60658 829 aa19■□□□□ 0.63
ATG4B-213ENST00000460211 CT47B1P0C2W7 299 aaPredicted RBP19■□□□□ 0.63
ATG4B-213ENST00000460211 VEGFBP49765 207 aa19■□□□□ 0.63
ATG4B-213ENST00000460211 TRMT2AQ8IZ69 625 aaKnown RBP19■□□□□ 0.63
ATG4B-213ENST00000460211 ATP6V0A2Q9Y487 856 aa19■□□□□ 0.63
ATG4B-213ENST00000460211 CACNA1FO60840 1977 aa19■□□□□ 0.63
ATG4B-213ENST00000460211 TMEM88BA6NKF7 163 aa18.99■□□□□ 0.63
ATG4B-213ENST00000460211 CWF19L2Q2TBE0 894 aaKnown RBP18.99■□□□□ 0.63
ATG4B-213ENST00000460211 CCDC152Q4G0S7 254 aa18.99■□□□□ 0.63
ATG4B-213ENST00000460211 PSMD1Q99460 953 aa18.99■□□□□ 0.63
ATG4B-213ENST00000460211 HACL1Q9UJ83 578 aa18.99■□□□□ 0.63
ATG4B-213ENST00000460211 CDHR2Q9BYE9 1310 aa18.99■□□□□ 0.63
ATG4B-213ENST00000460211 ITGBL1O95965 494 aaPredicted RBP18.98■□□□□ 0.63
ATG4B-213ENST00000460211 HNRNPUQ00839 825 aaKnown RBP eCLIP18.98■□□□□ 0.63
ATG4B-213ENST00000460211 GCKRQ14397 625 aa18.98■□□□□ 0.63
ATG4B-213ENST00000460211 SP8Q8IXZ3 490 aa18.98■□□□□ 0.63
ATG4B-213ENST00000460211 JARID2Q92833 1246 aaPredicted RBP18.98■□□□□ 0.63
ATG4B-213ENST00000460211 AIDAQ96BJ3 306 aa18.98■□□□□ 0.63
ATG4B-213ENST00000460211 EPHX2P34913 555 aa18.97■□□□□ 0.63
ATG4B-213ENST00000460211 ALDH1L2Q3SY69 923 aa18.97■□□□□ 0.63
ATG4B-213ENST00000460211 F6X3S4 739 aa18.96■□□□□ 0.63
ATG4B-213ENST00000460211 H7C1W4 665 aa18.96■□□□□ 0.63
ATG4B-213ENST00000460211 IARSP41252 1262 aaKnown RBP18.96■□□□□ 0.63
ATG4B-213ENST00000460211 MRPL50Q8N5N7 158 aaKnown RBP18.96■□□□□ 0.63
ATG4B-213ENST00000460211 SUPT20HQ8NEM7 779 aa18.96■□□□□ 0.63
ATG4B-213ENST00000460211 ADAMTSL1Q8N6G6 1762 aa18.96■□□□□ 0.63
ATG4B-213ENST00000460211 RPS8P62241 208 aaKnown RBP18.95■□□□□ 0.62
ATG4B-213ENST00000460211 MAP1SQ66K74 1059 aaPredicted RBP18.95■□□□□ 0.62
ATG4B-213ENST00000460211 SLC4A10Q6U841 1118 aa18.95■□□□□ 0.62
ATG4B-213ENST00000460211 UBE3BQ7Z3V4 1068 aa18.95■□□□□ 0.62
ATG4B-213ENST00000460211 JDP2Q8WYK2 163 aa18.95■□□□□ 0.62
ATG4B-213ENST00000460211 SSH1Q8WYL5 1049 aa18.95■□□□□ 0.62
ATG4B-213ENST00000460211 PTPRCP08575 1304 aa18.95■□□□□ 0.62
ATG4B-213ENST00000460211 CTCFP49711 727 aaPredicted RBP18.94■□□□□ 0.62
ATG4B-213ENST00000460211 BEND3Q5T5X7 828 aa18.94■□□□□ 0.62
ATG4B-213ENST00000460211 DPP8Q6V1X1 898 aaPredicted RBP18.94■□□□□ 0.62
ATG4B-213ENST00000460211 CNTROBQ8N137 903 aa18.94■□□□□ 0.62
ATG4B-213ENST00000460211 MPNDQ8N594 471 aa18.94■□□□□ 0.62
ATG4B-213ENST00000460211 VPS33BQ9H267 617 aa18.94■□□□□ 0.62
ATG4B-213ENST00000460211 PRDM10Q9NQV6 1147 aa18.94■□□□□ 0.62
ATG4B-213ENST00000460211 SMC4Q9NTJ3 1288 aa18.94■□□□□ 0.62
ATG4B-213ENST00000460211 FZD9O00144 591 aa18.93■□□□□ 0.62
ATG4B-213ENST00000460211 LBX1P52954 281 aa18.93■□□□□ 0.62
ATG4B-213ENST00000460211 CTSWP56202 376 aa18.93■□□□□ 0.62
ATG4B-213ENST00000460211 CELF1Q92879 486 aaKnown RBP18.93■□□□□ 0.62
ATG4B-213ENST00000460211 SRCIN1Q9C0H9 1055 aa18.93■□□□□ 0.62
ATG4B-213ENST00000460211 ALDH1L1O75891 902 aa18.92■□□□□ 0.62
ATG4B-213ENST00000460211 PNMA8AQ86V59 439 aaPredicted RBP18.92■□□□□ 0.62
ATG4B-213ENST00000460211 LARGE2Q8N3Y3 721 aa18.92■□□□□ 0.62
ATG4B-213ENST00000460211 CCDC85AQ96PX6 553 aaPredicted RBP18.92■□□□□ 0.62
ATG4B-213ENST00000460211 CDC5LQ99459 802 aaKnown RBP18.92■□□□□ 0.62
ATG4B-213ENST00000460211 BCL2L13Q9BXK5 485 aa18.92■□□□□ 0.62
ATG4B-213ENST00000460211 GJA3Q9Y6H8 435 aa18.92■□□□□ 0.62
ATG4B-213ENST00000460211 DEFB115Q30KQ5 88 aa18.91■□□□□ 0.62
ATG4B-213ENST00000460211 ANKRD18AQ8IVF6 992 aa18.91■□□□□ 0.62
ATG4B-213ENST00000460211 GPC2Q8N158 579 aa18.91■□□□□ 0.62
ATG4B-213ENST00000460211 PLA2G12BQ9BX93 195 aa18.91■□□□□ 0.62
ATG4B-213ENST00000460211 WBP1LQ9NX94 342 aa18.91■□□□□ 0.62
ATG4B-213ENST00000460211 C9orf78Q9NZ63 289 aaPredicted RBP18.91■□□□□ 0.62
ATG4B-213ENST00000460211 ABT1Q9ULW3 272 aaKnown RBP18.91■□□□□ 0.62
ATG4B-213ENST00000460211 COL4A5P29400 1685 aa18.9■□□□□ 0.62
ATG4B-213ENST00000460211 PPIP5K2O43314 1243 aa18.9■□□□□ 0.62
ATG4B-213ENST00000460211 SLC51AQ86UW1 340 aa18.9■□□□□ 0.62
ATG4B-213ENST00000460211 TTLL11Q8NHH1 800 aa18.9■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms