RNA–Protein interactions for RNA: ENST00000457463.1

CNOT3-205, Transcript of CCR4-NOT transcription complex subunit 3, humanhuman

TSL 3

Gene CNOT3, Length 1,269 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT3-205ENST00000457463 NBPF7P0C2Y1 421 aaPredicted RBP15.48■□□□□ 0.07
CNOT3-205ENST00000457463 GRAPQ13588 217 aa15.48■□□□□ 0.07
CNOT3-205ENST00000457463 DDX46Q7L014 1031 aaKnown RBP15.48■□□□□ 0.07
CNOT3-205ENST00000457463 GRAPLQ8TC17 118 aaPredicted RBP15.48■□□□□ 0.07
CNOT3-205ENST00000457463 TAF1P21675 1872 aa15.48■□□□□ 0.07
CNOT3-205ENST00000457463 TRIM27P14373 513 aa15.47■□□□□ 0.07
CNOT3-205ENST00000457463 YY1P25490 414 aa15.47■□□□□ 0.07
CNOT3-205ENST00000457463 CTSWP56202 376 aa15.47■□□□□ 0.07
CNOT3-205ENST00000457463 TTLL11Q8NHH1 800 aa15.47■□□□□ 0.07
CNOT3-205ENST00000457463 SNED1Q8TER0 1413 aa15.47■□□□□ 0.07
CNOT3-205ENST00000457463 PLA2G12BQ9BX93 195 aa15.47■□□□□ 0.07
CNOT3-205ENST00000457463 API5Q9BZZ5 524 aaKnown RBP15.47■□□□□ 0.07
CNOT3-205ENST00000457463 GREM2Q9H772 168 aa15.47■□□□□ 0.07
CNOT3-205ENST00000457463 C9orf78Q9NZ63 289 aaPredicted RBP15.47■□□□□ 0.07
CNOT3-205ENST00000457463 FOXO4P98177 505 aa15.46■□□□□ 0.07
CNOT3-205ENST00000457463 KAZALD1Q96I82 304 aa15.46■□□□□ 0.07
CNOT3-205ENST00000457463 SUCLG2Q96I99 432 aa15.46■□□□□ 0.07
CNOT3-205ENST00000457463 KIF16BQ96L93 1317 aa15.45■□□□□ 0.06
CNOT3-205ENST00000457463 CCDC152Q4G0S7 254 aa15.45■□□□□ 0.06
CNOT3-205ENST00000457463 CCDC93Q567U6 631 aa15.45■□□□□ 0.06
CNOT3-205ENST00000457463 C9orf131Q5VYM1 1079 aa15.45■□□□□ 0.06
CNOT3-205ENST00000457463 ARHGAP45Q92619 1136 aa15.45■□□□□ 0.06
CNOT3-205ENST00000457463 CLUAP1Q96AJ1 413 aa15.45■□□□□ 0.06
CNOT3-205ENST00000457463 USP44Q9H0E7 712 aa15.45■□□□□ 0.06
CNOT3-205ENST00000457463 ATP6V0A2Q9Y487 856 aa15.45■□□□□ 0.06
CNOT3-205ENST00000457463 BBOX1O75936 387 aa15.44■□□□□ 0.06
CNOT3-205ENST00000457463 CSF1RP07333 972 aa15.44■□□□□ 0.06
CNOT3-205ENST00000457463 FAM161AQ3B820 660 aa15.44■□□□□ 0.06
CNOT3-205ENST00000457463 ATF7IPQ6VMQ6 1270 aa15.44■□□□□ 0.06
CNOT3-205ENST00000457463 TAOK3Q9H2K8 898 aa15.44■□□□□ 0.06
CNOT3-205ENST00000457463 UTYO14607 1347 aa15.43■□□□□ 0.06
CNOT3-205ENST00000457463 HSP90B1P14625 803 aaKnown RBP15.43■□□□□ 0.06
CNOT3-205ENST00000457463 RPS8P62241 208 aaKnown RBP15.43■□□□□ 0.06
CNOT3-205ENST00000457463 ZKSCAN2Q63HK3 967 aa15.43■□□□□ 0.06
CNOT3-205ENST00000457463 SP8Q8IXZ3 490 aa15.43■□□□□ 0.06
CNOT3-205ENST00000457463 ZNF277Q9NRM2 450 aaPredicted RBP15.43■□□□□ 0.06
CNOT3-205ENST00000457463 RNF181Q9P0P0 153 aa15.43■□□□□ 0.06
CNOT3-205ENST00000457463 FER1L6Q2WGJ9 1857 aa15.42■□□□□ 0.06
CNOT3-205ENST00000457463 CCT4P50991 539 aaKnown RBP15.42■□□□□ 0.06
CNOT3-205ENST00000457463 LMBR1LQ6UX01 489 aa15.42■□□□□ 0.06
CNOT3-205ENST00000457463 CHD4Q14839 1912 aa15.41■□□□□ 0.06
CNOT3-205ENST00000457463 IPO8O15397 1037 aaKnown RBP15.41■□□□□ 0.06
CNOT3-205ENST00000457463 RLBP1P12271 317 aa15.41■□□□□ 0.06
CNOT3-205ENST00000457463 LMNB1P20700 586 aa15.41■□□□□ 0.06
CNOT3-205ENST00000457463 ITGA6P23229 1130 aa15.41■□□□□ 0.06
CNOT3-205ENST00000457463 FKBP4Q02790 459 aaKnown RBP eCLIP15.41■□□□□ 0.06
CNOT3-205ENST00000457463 SOGA3Q5TF21 947 aa15.41■□□□□ 0.06
CNOT3-205ENST00000457463 INTS3Q68E01 1043 aaKnown RBP15.41■□□□□ 0.06
CNOT3-205ENST00000457463 TMEM57Q8N5G2 664 aa15.41■□□□□ 0.06
CNOT3-205ENST00000457463 ANKRD44Q8N8A2 993 aa15.41■□□□□ 0.06
CNOT3-205ENST00000457463 MEIS3Q99687 375 aa15.41■□□□□ 0.06
CNOT3-205ENST00000457463 BICC1Q9H694 974 aaKnown RBP15.41■□□□□ 0.06
CNOT3-205ENST00000457463 RCAN3Q9UKA8 241 aa15.41■□□□□ 0.06
CNOT3-205ENST00000457463 CHMP3Q9Y3E7 222 aa15.41■□□□□ 0.06
CNOT3-205ENST00000457463 LTBP3Q9NS15 1303 aa15.41■□□□□ 0.06
CNOT3-205ENST00000457463 PLIN1O60240 522 aa15.4■□□□□ 0.06
CNOT3-205ENST00000457463 GPSM2P81274 684 aa15.4■□□□□ 0.06
CNOT3-205ENST00000457463 RTKN2Q8IZC4 609 aa15.4■□□□□ 0.06
CNOT3-205ENST00000457463 RTL9Q8NET4 1388 aa15.39■□□□□ 0.05
CNOT3-205ENST00000457463 WTIPA6NIX2 430 aaPredicted RBP15.39■□□□□ 0.05
CNOT3-205ENST00000457463 CC2D2BQ6DHV5 1058 aa15.39■□□□□ 0.05
CNOT3-205ENST00000457463 ANKRD18AQ8IVF6 992 aa15.39■□□□□ 0.05
CNOT3-205ENST00000457463 ZNF594Q96JF6 807 aaPredicted RBP15.39■□□□□ 0.05
CNOT3-205ENST00000457463 GPR101Q96P66 508 aaPredicted RBP15.39■□□□□ 0.05
CNOT3-205ENST00000457463 SBF1O95248 1867 aa15.39■□□□□ 0.05
CNOT3-205ENST00000457463 COL4A5P29400 1685 aa15.38■□□□□ 0.05
CNOT3-205ENST00000457463 MPNDQ8N594 471 aa15.38■□□□□ 0.05
CNOT3-205ENST00000457463 ZNF784Q8NCA9 323 aaPredicted RBP15.38■□□□□ 0.05
CNOT3-205ENST00000457463 PANK1Q8TE04 598 aa15.38■□□□□ 0.05
CNOT3-205ENST00000457463 ZNF526Q8TF50 670 aaPredicted RBP15.38■□□□□ 0.05
CNOT3-205ENST00000457463 PSMD1Q99460 953 aa15.38■□□□□ 0.05
CNOT3-205ENST00000457463 NSFL1CQ9UNZ2 370 aaKnown RBP15.38■□□□□ 0.05
CNOT3-205ENST00000457463 MYH3P11055 1940 aa15.37■□□□□ 0.05
CNOT3-205ENST00000457463 DUOX1Q9NRD9 1551 aa15.37■□□□□ 0.05
CNOT3-205ENST00000457463 ANKRD18BA2A2Z9 1011 aa15.37■□□□□ 0.05
CNOT3-205ENST00000457463 IARSP41252 1262 aaKnown RBP15.37■□□□□ 0.05
CNOT3-205ENST00000457463 RABL6Q3YEC7 729 aaPredicted RBP15.37■□□□□ 0.05
CNOT3-205ENST00000457463 DPP8Q6V1X1 898 aaPredicted RBP15.37■□□□□ 0.05
CNOT3-205ENST00000457463 TMC4Q7Z404 712 aa15.37■□□□□ 0.05
CNOT3-205ENST00000457463 DZIP1LQ8IYY4 767 aaKnown RBP15.37■□□□□ 0.05
CNOT3-205ENST00000457463 CDC5LQ99459 802 aaKnown RBP15.37■□□□□ 0.05
CNOT3-205ENST00000457463 POLLQ9UGP5 575 aa15.37■□□□□ 0.05
CNOT3-205ENST00000457463 LRRC37AA6NMS7 1700 aa15.37■□□□□ 0.05
CNOT3-205ENST00000457463 UBTFL1P0CB47 393 aaPredicted RBP15.36■□□□□ 0.05
CNOT3-205ENST00000457463 IFIT5Q13325 482 aaKnown RBP15.36■□□□□ 0.05
CNOT3-205ENST00000457463 RTFDC1Q9BY42 306 aaPredicted RBP15.36■□□□□ 0.05
CNOT3-205ENST00000457463 TMX4Q9H1E5 349 aaPredicted RBP15.36■□□□□ 0.05
CNOT3-205ENST00000457463 BSDC1Q9NW68 430 aaPredicted RBP15.36■□□□□ 0.05
CNOT3-205ENST00000457463 MINPP1Q9UNW1 487 aa15.36■□□□□ 0.05
CNOT3-205ENST00000457463 LRRFIP2Q9Y608 721 aaKnown RBP15.36■□□□□ 0.05
CNOT3-205ENST00000457463 CCDC88AQ3V6T2 1871 aa15.35■□□□□ 0.05
CNOT3-205ENST00000457463 IGHMBP2P38935 993 aaKnown RBP15.35■□□□□ 0.05
CNOT3-205ENST00000457463 AOC3Q16853 763 aa15.35■□□□□ 0.05
CNOT3-205ENST00000457463 KLHDC4Q8TBB5 520 aa15.35■□□□□ 0.05
CNOT3-205ENST00000457463 TBC1D16Q8TBP0 767 aa15.35■□□□□ 0.05
CNOT3-205ENST00000457463 PUS3Q9BZE2 481 aaKnown RBP15.35■□□□□ 0.05
CNOT3-205ENST00000457463 RIMBP2O15034 1052 aa15.34■□□□□ 0.05
CNOT3-205ENST00000457463 PPIP5K2O43314 1243 aa15.34■□□□□ 0.05
CNOT3-205ENST00000457463 CCDC57Q2TAC2 916 aa15.34■□□□□ 0.05
CNOT3-205ENST00000457463 C20orf194Q5TEA3 1177 aa15.34■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms