RNA–Protein interactions for RNA: ENST00000457232.5

HNF4A-206, Transcript of hepatocyte nuclear factor 4 alpha, humanhuman

TSL 1 (best) BASIC

Gene HNF4A, Length 1,339 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNF4A-206ENST00000457232 VPS33BQ9H267 617 aa16.57■□□□□ 0.24
HNF4A-206ENST00000457232 IFT57Q9NWB7 429 aa16.57■□□□□ 0.24
HNF4A-206ENST00000457232 HYPKQ9NX55 129 aa16.57■□□□□ 0.24
HNF4A-206ENST00000457232 TMEM88BA6NKF7 163 aa16.56■□□□□ 0.24
HNF4A-206ENST00000457232 ATP5J2-PTCD1G3V325 749 aa16.56■□□□□ 0.24
HNF4A-206ENST00000457232 DDX46Q7L014 1031 aaKnown RBP16.56■□□□□ 0.24
HNF4A-206ENST00000457232 CNTROBQ8N137 903 aa16.56■□□□□ 0.24
HNF4A-206ENST00000457232 FAM89AQ96GI7 184 aa16.56■□□□□ 0.24
HNF4A-206ENST00000457232 THSD7BQ9C0I4 1608 aa16.56■□□□□ 0.24
HNF4A-206ENST00000457232 CXCL9Q07325 125 aa16.55■□□□□ 0.24
HNF4A-206ENST00000457232 KIAA2012Q0VF49 1180 aa16.55■□□□□ 0.24
HNF4A-206ENST00000457232 CCDC184Q52MB2 194 aa16.55■□□□□ 0.24
HNF4A-206ENST00000457232 DPP8Q6V1X1 898 aaPredicted RBP16.55■□□□□ 0.24
HNF4A-206ENST00000457232 MPNDQ8N594 471 aa16.55■□□□□ 0.24
HNF4A-206ENST00000457232 LMOD1P29536 600 aaPredicted RBP16.54■□□□□ 0.24
HNF4A-206ENST00000457232 GNAI1P63096 354 aa16.54■□□□□ 0.24
HNF4A-206ENST00000457232 TRIM28Q13263 835 aaKnown RBP16.54■□□□□ 0.24
HNF4A-206ENST00000457232 SF3B3Q15393 1217 aaKnown RBP16.54■□□□□ 0.24
HNF4A-206ENST00000457232 SUPT20HQ8NEM7 779 aa16.54■□□□□ 0.24
HNF4A-206ENST00000457232 CELF1Q92879 486 aaKnown RBP16.54■□□□□ 0.24
HNF4A-206ENST00000457232 TMX4Q9H1E5 349 aaPredicted RBP16.54■□□□□ 0.24
HNF4A-206ENST00000457232 PHAXQ9H814 394 aaKnown RBP16.54■□□□□ 0.24
HNF4A-206ENST00000457232 ZNRF3Q9ULT6 936 aa16.54■□□□□ 0.24
HNF4A-206ENST00000457232 C8orf58Q8NAV2 365 aa16.53■□□□□ 0.24
HNF4A-206ENST00000457232 GPRC5DQ9NZD1 345 aa16.53■□□□□ 0.24
HNF4A-206ENST00000457232 ELL2O00472 640 aaPredicted RBP16.52■□□□□ 0.24
HNF4A-206ENST00000457232 VEGFBP49765 207 aa16.52■□□□□ 0.24
HNF4A-206ENST00000457232 FMR1Q06787 632 aaKnown RBP eCLIP16.52■□□□□ 0.24
HNF4A-206ENST00000457232 USP50Q70EL3 339 aaPredicted RBP16.52■□□□□ 0.24
HNF4A-206ENST00000457232 TMC4Q7Z404 712 aa16.52■□□□□ 0.24
HNF4A-206ENST00000457232 MYH3P11055 1940 aa16.52■□□□□ 0.24
HNF4A-206ENST00000457232 SCN9AQ15858 1988 aa16.52■□□□□ 0.23
HNF4A-206ENST00000457232 RASSF10A6NK89 507 aa16.51■□□□□ 0.23
HNF4A-206ENST00000457232 YDJCA8MPS7 323 aa16.51■□□□□ 0.23
HNF4A-206ENST00000457232 CALD1Q05682 793 aaKnown RBP16.51■□□□□ 0.23
HNF4A-206ENST00000457232 RTL5Q5HYW3 569 aaPredicted RBP16.51■□□□□ 0.23
HNF4A-206ENST00000457232 PSME4Q14997 1843 aa16.5■□□□□ 0.23
HNF4A-206ENST00000457232 SPEF2Q9C093 1822 aa16.5■□□□□ 0.23
HNF4A-206ENST00000457232 IRS4O14654 1257 aaPredicted RBP16.5■□□□□ 0.23
HNF4A-206ENST00000457232 GMPSP49915 693 aaPredicted RBP16.5■□□□□ 0.23
HNF4A-206ENST00000457232 GOLGA2Q08379 1002 aa16.5■□□□□ 0.23
HNF4A-206ENST00000457232 CIAPIN1Q6FI81 312 aa16.5■□□□□ 0.23
HNF4A-206ENST00000457232 ADARB2Q9NS39 739 aaKnown RBP16.5■□□□□ 0.23
HNF4A-206ENST00000457232 CDHR2Q9BYE9 1310 aa16.5■□□□□ 0.23
HNF4A-206ENST00000457232 RAD17O75943 681 aa16.49■□□□□ 0.23
HNF4A-206ENST00000457232 RIC3Q7Z5B4 369 aa16.49■□□□□ 0.23
HNF4A-206ENST00000457232 TSPYL6Q8N831 410 aa16.49■□□□□ 0.23
HNF4A-206ENST00000457232 TRAF5O00463 557 aa16.48■□□□□ 0.23
HNF4A-206ENST00000457232 FOXN1O15353 648 aa16.48■□□□□ 0.23
HNF4A-206ENST00000457232 TNS4Q8IZW8 715 aa16.48■□□□□ 0.23
HNF4A-206ENST00000457232 ZBTB38Q8NAP3 1195 aaPredicted RBP16.48■□□□□ 0.23
HNF4A-206ENST00000457232 MYD88Q99836 296 aa16.48■□□□□ 0.23
HNF4A-206ENST00000457232 GPSM2P81274 684 aa16.47■□□□□ 0.23
HNF4A-206ENST00000457232 DEFB115Q30KQ5 88 aa16.47■□□□□ 0.23
HNF4A-206ENST00000457232 TSR2Q969E8 191 aaKnown RBP16.47■□□□□ 0.23
HNF4A-206ENST00000457232 POLLQ9UGP5 575 aa16.47■□□□□ 0.23
HNF4A-206ENST00000457232 NSFL1CQ9UNZ2 370 aaKnown RBP16.47■□□□□ 0.23
HNF4A-206ENST00000457232 SHTN1A0MZ66 631 aa16.46■□□□□ 0.23
HNF4A-206ENST00000457232 PCCAP05165 728 aaPredicted RBP16.46■□□□□ 0.23
HNF4A-206ENST00000457232 HIRAP54198 1017 aaPredicted RBP16.46■□□□□ 0.23
HNF4A-206ENST00000457232 CST9Q5W186 159 aa16.46■□□□□ 0.23
HNF4A-206ENST00000457232 MIER1Q8N108 512 aa16.46■□□□□ 0.23
HNF4A-206ENST00000457232 CCDC191Q8NCU4 936 aa16.46■□□□□ 0.23
HNF4A-206ENST00000457232 SEC31BQ9NQW1 1179 aa16.46■□□□□ 0.23
HNF4A-206ENST00000457232 PGAP2Q9UHJ9 254 aa16.46■□□□□ 0.23
HNF4A-206ENST00000457232 ZNF646O15015 1829 aaPredicted RBP16.46■□□□□ 0.23
HNF4A-206ENST00000457232 CACNA1FO60840 1977 aa16.46■□□□□ 0.22
HNF4A-206ENST00000457232 POLR2AP24928 1970 aaKnown RBP16.46■□□□□ 0.22
HNF4A-206ENST00000457232 RPS8P62241 208 aaKnown RBP16.45■□□□□ 0.22
HNF4A-206ENST00000457232 TNIP1Q15025 636 aa16.45■□□□□ 0.22
HNF4A-206ENST00000457232 CCDC27Q2M243 656 aa16.45■□□□□ 0.22
HNF4A-206ENST00000457232 WASHC4Q2M389 1173 aa16.45■□□□□ 0.22
HNF4A-206ENST00000457232 CCDC30Q5VVM6 783 aa16.45■□□□□ 0.22
HNF4A-206ENST00000457232 TRPM4Q8TD43 1214 aa16.45■□□□□ 0.22
HNF4A-206ENST00000457232 METTL22Q9BUU2 404 aaPredicted RBP16.45■□□□□ 0.22
HNF4A-206ENST00000457232 DBNDD1Q9H9R9 158 aa16.45■□□□□ 0.22
HNF4A-206ENST00000457232 WBP1LQ9NX94 342 aa16.45■□□□□ 0.22
HNF4A-206ENST00000457232 ABT1Q9ULW3 272 aaKnown RBP16.45■□□□□ 0.22
HNF4A-206ENST00000457232 TBC1D16Q8TBP0 767 aa16.45■□□□□ 0.22
HNF4A-206ENST00000457232 JARID2Q92833 1246 aaPredicted RBP16.45■□□□□ 0.22
HNF4A-206ENST00000457232 GPR101Q96P66 508 aaPredicted RBP16.45■□□□□ 0.22
HNF4A-206ENST00000457232 CWC25Q9NXE8 425 aaPredicted RBP16.45■□□□□ 0.22
HNF4A-206ENST00000457232 ZBTB12Q9Y330 459 aaPredicted RBP16.45■□□□□ 0.22
HNF4A-206ENST00000457232 WDR33Q9C0J8 1336 aaKnown RBP16.44■□□□□ 0.22
HNF4A-206ENST00000457232 RTL9Q8NET4 1388 aa16.44■□□□□ 0.22
HNF4A-206ENST00000457232 PSMD14O00487 310 aa16.44■□□□□ 0.22
HNF4A-206ENST00000457232 RIMBP2O15034 1052 aa16.44■□□□□ 0.22
HNF4A-206ENST00000457232 IGKV5-2P06315 115 aa16.44■□□□□ 0.22
HNF4A-206ENST00000457232 WWC1Q8IX03 1113 aa16.44■□□□□ 0.22
HNF4A-206ENST00000457232 BCL2L13Q9BXK5 485 aa16.44■□□□□ 0.22
HNF4A-206ENST00000457232 GLIS2Q9BZE0 524 aaPredicted RBP16.44■□□□□ 0.22
HNF4A-206ENST00000457232 PODXL2Q9NZ53 605 aa16.44■□□□□ 0.22
HNF4A-206ENST00000457232 CNOT7Q9UIV1 285 aaKnown RBP16.44■□□□□ 0.22
HNF4A-206ENST00000457232 MAP3K2Q9Y2U5 619 aa16.44■□□□□ 0.22
HNF4A-206ENST00000457232 C6orf229H3BNL8 230 aa16.43■□□□□ 0.22
HNF4A-206ENST00000457232 ECE2O60344 883 aa16.43■□□□□ 0.22
HNF4A-206ENST00000457232 PDE8AO60658 829 aa16.43■□□□□ 0.22
HNF4A-206ENST00000457232 MICALL2Q8IY33 904 aa16.43■□□□□ 0.22
HNF4A-206ENST00000457232 KCNQ5Q9NR82 932 aa16.43■□□□□ 0.22
HNF4A-206ENST00000457232 TLL2Q9Y6L7 1015 aa16.43■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms