RNA–Protein interactions for RNA: ENST00000454591.6

ECHDC1-209, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 2 BASIC

Gene ECHDC1, Length 1,515 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-209ENST00000454591 OFD1O75665 1012 aa14.96□□□□□ -0.02
ECHDC1-209ENST00000454591 PDCP20941 246 aa14.96□□□□□ -0.02
ECHDC1-209ENST00000454591 RPS6KB1P23443 525 aa14.96□□□□□ -0.02
ECHDC1-209ENST00000454591 ME3Q16798 604 aa14.96□□□□□ -0.02
ECHDC1-209ENST00000454591 CCDC39Q9UFE4 941 aa14.96□□□□□ -0.02
ECHDC1-209ENST00000454591 ELP1O95163 1332 aa14.96□□□□□ -0.02
ECHDC1-209ENST00000454591 MYL6BP14649 208 aa14.95□□□□□ -0.02
ECHDC1-209ENST00000454591 CCDC83Q8IWF9 413 aa14.95□□□□□ -0.02
ECHDC1-209ENST00000454591 HAUS7Q99871 368 aa14.95□□□□□ -0.02
ECHDC1-209ENST00000454591 BOLA2Q9H3K6 86 aa14.95□□□□□ -0.02
ECHDC1-209ENST00000454591 ATG3Q9NT62 314 aa14.95□□□□□ -0.02
ECHDC1-209ENST00000454591 DBNLQ9UJU6 430 aaKnown RBP14.95□□□□□ -0.02
ECHDC1-209ENST00000454591 CNPY2Q9Y2B0 182 aa14.95□□□□□ -0.02
ECHDC1-209ENST00000454591 CPA1P15085 419 aa14.94□□□□□ -0.02
ECHDC1-209ENST00000454591 CABP4P57796 275 aa14.94□□□□□ -0.02
ECHDC1-209ENST00000454591 BLOC1S2Q6QNY1 142 aa14.94□□□□□ -0.02
ECHDC1-209ENST00000454591 TPCN1Q9ULQ1 816 aa14.94□□□□□ -0.02
ECHDC1-209ENST00000454591 ZKSCAN5Q9Y2L8 839 aa14.94□□□□□ -0.02
ECHDC1-209ENST00000454591 U3KPZ7 1027 aaPredicted RBP14.94□□□□□ -0.02
ECHDC1-209ENST00000454591 WDR17Q8IZU2 1322 aa14.94□□□□□ -0.02
ECHDC1-209ENST00000454591 SH3TC1Q8TE82 1336 aa14.94□□□□□ -0.02
ECHDC1-209ENST00000454591 PCDH11XQ9BZA7 1347 aa14.94□□□□□ -0.02
ECHDC1-209ENST00000454591 PCDH11YQ9BZA8 1340 aa14.94□□□□□ -0.02
ECHDC1-209ENST00000454591 MSNP26038 577 aaKnown RBP14.93□□□□□ -0.02
ECHDC1-209ENST00000454591 FUCA2Q9BTY2 467 aa14.93□□□□□ -0.02
ECHDC1-209ENST00000454591 EIF2AK3Q9NZJ5 1116 aaKnown RBP14.93□□□□□ -0.02
ECHDC1-209ENST00000454591 ZNF609O15014 1411 aa14.93□□□□□ -0.02
ECHDC1-209ENST00000454591 CSB-PGBD3P0DP91 1061 aa14.92□□□□□ -0.02
ECHDC1-209ENST00000454591 KCNJ4P48050 445 aa14.92□□□□□ -0.02
ECHDC1-209ENST00000454591 FOXO4P98177 505 aa14.92□□□□□ -0.02
ECHDC1-209ENST00000454591 TFCP2Q12800 502 aa14.92□□□□□ -0.02
ECHDC1-209ENST00000454591 TOB2Q14106 344 aaPredicted RBP14.92□□□□□ -0.02
ECHDC1-209ENST00000454591 LAMA4Q16363 1823 aa14.92□□□□□ -0.02
ECHDC1-209ENST00000454591 PDZRN4Q6ZMN7 1036 aaPredicted RBP14.92□□□□□ -0.02
ECHDC1-209ENST00000454591 SIL1Q9H173 461 aa14.92□□□□□ -0.02
ECHDC1-209ENST00000454591 COL5A2P05997 1499 aaPredicted RBP14.92□□□□□ -0.02
ECHDC1-209ENST00000454591 A0A087WZG4 1122 aa14.92□□□□□ -0.02
ECHDC1-209ENST00000454591 TPM2P07951 284 aa14.92□□□□□ -0.02
ECHDC1-209ENST00000454591 ZNF589Q86UQ0 364 aaPredicted RBP14.92□□□□□ -0.02
ECHDC1-209ENST00000454591 PPIL4Q8WUA2 492 aaKnown RBP eCLIP14.92□□□□□ -0.02
ECHDC1-209ENST00000454591 GDPD2Q9HCC8 539 aa14.92□□□□□ -0.02
ECHDC1-209ENST00000454591 ZBTB4Q9P1Z0 1013 aaPredicted RBP14.92□□□□□ -0.02
ECHDC1-209ENST00000454591 FBXO3Q9UK99 471 aa14.92□□□□□ -0.02
ECHDC1-209ENST00000454591 CIAO1O76071 339 aa14.91□□□□□ -0.02
ECHDC1-209ENST00000454591 UBE3BQ7Z3V4 1068 aa14.91□□□□□ -0.02
ECHDC1-209ENST00000454591 KBTBD3Q8NAB2 608 aa14.91□□□□□ -0.02
ECHDC1-209ENST00000454591 KLHDC4Q8TBB5 520 aa14.91□□□□□ -0.02
ECHDC1-209ENST00000454591 MYH15Q9Y2K3 1946 aa14.9□□□□□ -0.02
ECHDC1-209ENST00000454591 NBPF26B4DH59 902 aa14.9□□□□□ -0.02
ECHDC1-209ENST00000454591 MCMDC2Q4G0Z9 681 aa14.9□□□□□ -0.02
ECHDC1-209ENST00000454591 NBPF14Q5TI25 921 aa14.9□□□□□ -0.02
ECHDC1-209ENST00000454591 NBPF10Q6P3W6 841 aaKnown RBP14.9□□□□□ -0.02
ECHDC1-209ENST00000454591 ATG9AQ7Z3C6 839 aa14.9□□□□□ -0.02
ECHDC1-209ENST00000454591 NBPF15Q8N660 670 aa14.9□□□□□ -0.02
ECHDC1-209ENST00000454591 CCDC191Q8NCU4 936 aa14.9□□□□□ -0.02
ECHDC1-209ENST00000454591 HELLSQ9NRZ9 838 aa14.9□□□□□ -0.02
ECHDC1-209ENST00000454591 SOS2Q07890 1332 aaPredicted RBP14.89□□□□□ -0.03
ECHDC1-209ENST00000454591 HMGB1P09429 215 aaKnown RBP14.89□□□□□ -0.03
ECHDC1-209ENST00000454591 IL15P40933 162 aaPredicted RBP14.89□□□□□ -0.03
ECHDC1-209ENST00000454591 LARP1BQ659C4 914 aaKnown RBP14.89□□□□□ -0.03
ECHDC1-209ENST00000454591 ZCRB1Q8TBF4 217 aaKnown RBP14.89□□□□□ -0.03
ECHDC1-209ENST00000454591 NAP1L5Q96NT1 182 aaPredicted RBP14.89□□□□□ -0.03
ECHDC1-209ENST00000454591 DSCC1Q9BVC3 393 aa14.89□□□□□ -0.03
ECHDC1-209ENST00000454591 AGXT2Q9BYV1 514 aa14.89□□□□□ -0.03
ECHDC1-209ENST00000454591 CWC25Q9NXE8 425 aaPredicted RBP14.89□□□□□ -0.03
ECHDC1-209ENST00000454591 TOGARAM1Q9Y4F4 1720 aa14.89□□□□□ -0.03
ECHDC1-209ENST00000454591 KRT85P78386 507 aa14.88□□□□□ -0.03
ECHDC1-209ENST00000454591 DNM1Q05193 864 aaKnown RBP14.88□□□□□ -0.03
ECHDC1-209ENST00000454591 CHRNA2Q15822 529 aa14.88□□□□□ -0.03
ECHDC1-209ENST00000454591 DBNDD2Q9BQY9 259 aa14.88□□□□□ -0.03
ECHDC1-209ENST00000454591 LLPHQ9BRT6 129 aaKnown RBP14.88□□□□□ -0.03
ECHDC1-209ENST00000454591 ABCC12Q96J65 1359 aa14.88□□□□□ -0.03
ECHDC1-209ENST00000454591 TRIM28Q13263 835 aaKnown RBP14.87□□□□□ -0.03
ECHDC1-209ENST00000454591 LMBR1LQ6UX01 489 aa14.87□□□□□ -0.03
ECHDC1-209ENST00000454591 FBXL16Q8N461 479 aa14.87□□□□□ -0.03
ECHDC1-209ENST00000454591 CABLES1Q8TDN4 633 aa14.87□□□□□ -0.03
ECHDC1-209ENST00000454591 DDX17Q92841 729 aaKnown RBP14.87□□□□□ -0.03
ECHDC1-209ENST00000454591 GTF3C6Q969F1 213 aa14.87□□□□□ -0.03
ECHDC1-209ENST00000454591 NEK1Q96PY6 1258 aa14.87□□□□□ -0.03
ECHDC1-209ENST00000454591 LARP6Q9BRS8 491 aaKnown RBP14.87□□□□□ -0.03
ECHDC1-209ENST00000454591 CARD10Q9BWT7 1032 aa14.87□□□□□ -0.03
ECHDC1-209ENST00000454591 SCAND2PQ9GZW5 306 aaPredicted RBP14.87□□□□□ -0.03
ECHDC1-209ENST00000454591 ZMYM1Q5SVZ6 1142 aa14.87□□□□□ -0.03
ECHDC1-209ENST00000454591 BRINP3Q76B58 766 aa14.87□□□□□ -0.03
ECHDC1-209ENST00000454591 NECAB1Q8N987 351 aa14.87□□□□□ -0.03
ECHDC1-209ENST00000454591 SMARCC2Q8TAQ2 1214 aa14.87□□□□□ -0.03
ECHDC1-209ENST00000454591 ISCA1Q9BUE6 129 aa14.87□□□□□ -0.03
ECHDC1-209ENST00000454591 DDX60Q8IY21 1712 aaKnown RBP14.86□□□□□ -0.03
ECHDC1-209ENST00000454591 NHSL1Q5SYE7 1610 aa14.86□□□□□ -0.03
ECHDC1-209ENST00000454591 FIBPO43427 364 aa14.86□□□□□ -0.03
ECHDC1-209ENST00000454591 RBM43Q6ZSC3 357 aaKnown RBP14.86□□□□□ -0.03
ECHDC1-209ENST00000454591 TTC6Q86TZ1 520 aa14.86□□□□□ -0.03
ECHDC1-209ENST00000454591 CHMP4CQ96CF2 233 aa14.86□□□□□ -0.03
ECHDC1-209ENST00000454591 PLA2G12BQ9BX93 195 aa14.86□□□□□ -0.03
ECHDC1-209ENST00000454591 TAF6LQ9Y6J9 622 aa14.86□□□□□ -0.03
ECHDC1-209ENST00000454591 VPS37CA5D8V6 355 aaPredicted RBP14.85□□□□□ -0.03
ECHDC1-209ENST00000454591 ATP5J2-PTCD1G3V325 749 aa14.85□□□□□ -0.03
ECHDC1-209ENST00000454591 EYA2O00167 538 aa14.85□□□□□ -0.03
ECHDC1-209ENST00000454591 PTCD1O75127 700 aaKnown RBP14.85□□□□□ -0.03
ECHDC1-209ENST00000454591 COL9A3Q14050 684 aaPredicted RBP14.85□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms