RNA–Protein interactions for RNA: ENST00000454428.5

UBE2D4-209, Transcript of ubiquitin conjugating enzyme E2 D4 (putative), humanhuman

TSL 3

Gene UBE2D4, Length 288 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D4-209ENST00000454428 ANKRD36CQ5JPF3 1778 aa22.85■■□□□ 1.25
UBE2D4-209ENST00000454428 TAF1P21675 1872 aa22.84■■□□□ 1.25
UBE2D4-209ENST00000454428 YDJCA8MPS7 323 aa22.84■■□□□ 1.25
UBE2D4-209ENST00000454428 RAD17O75943 681 aa22.84■■□□□ 1.25
UBE2D4-209ENST00000454428 KIAA2012Q0VF49 1180 aa22.84■■□□□ 1.25
UBE2D4-209ENST00000454428 PARP10Q53GL7 1025 aa22.83■■□□□ 1.25
UBE2D4-209ENST00000454428 CDC37L1Q7L3B6 337 aa22.83■■□□□ 1.25
UBE2D4-209ENST00000454428 PPP1R42Q7Z4L9 355 aa22.83■■□□□ 1.25
UBE2D4-209ENST00000454428 SUPT20HQ8NEM7 779 aa22.83■■□□□ 1.25
UBE2D4-209ENST00000454428 CCER1Q8TC90 406 aaPredicted RBP22.83■■□□□ 1.25
UBE2D4-209ENST00000454428 PNISRQ8TF01 805 aaKnown RBP22.83■■□□□ 1.25
UBE2D4-209ENST00000454428 NOGQ13253 232 aa22.82■■□□□ 1.24
UBE2D4-209ENST00000454428 PDIA6Q15084 440 aa22.82■■□□□ 1.24
UBE2D4-209ENST00000454428 DPP8Q6V1X1 898 aaPredicted RBP22.82■■□□□ 1.24
UBE2D4-209ENST00000454428 SP8Q8IXZ3 490 aa22.82■■□□□ 1.24
UBE2D4-209ENST00000454428 THUMPD2Q9BTF0 503 aaKnown RBP22.82■■□□□ 1.24
UBE2D4-209ENST00000454428 FAM155AB1AL88 458 aaPredicted RBP22.81■■□□□ 1.24
UBE2D4-209ENST00000454428 USP48Q86UV5 1035 aa22.81■■□□□ 1.24
UBE2D4-209ENST00000454428 UTP14AQ9BVJ6 771 aaKnown RBP22.81■■□□□ 1.24
UBE2D4-209ENST00000454428 BCL2L13Q9BXK5 485 aa22.81■■□□□ 1.24
UBE2D4-209ENST00000454428 CNOT7Q9UIV1 285 aaKnown RBP22.81■■□□□ 1.24
UBE2D4-209ENST00000454428 LRRC37AA6NMS7 1700 aa22.8■■□□□ 1.24
UBE2D4-209ENST00000454428 POLR2AP24928 1970 aaKnown RBP22.8■■□□□ 1.24
UBE2D4-209ENST00000454428 BBOX1O75936 387 aa22.8■■□□□ 1.24
UBE2D4-209ENST00000454428 HUNKP57058 714 aa22.8■■□□□ 1.24
UBE2D4-209ENST00000454428 MPNDQ8N594 471 aa22.8■■□□□ 1.24
UBE2D4-209ENST00000454428 TMX4Q9H1E5 349 aaPredicted RBP22.8■■□□□ 1.24
UBE2D4-209ENST00000454428 ERBB4Q15303 1308 aa22.8■■□□□ 1.24
UBE2D4-209ENST00000454428 TNIP1Q15025 636 aa22.79■■□□□ 1.24
UBE2D4-209ENST00000454428 PLEKHF1Q96S99 279 aa22.79■■□□□ 1.24
UBE2D4-209ENST00000454428 PROSER3Q2NL68 480 aa22.78■■□□□ 1.24
UBE2D4-209ENST00000454428 MICALL2Q8IY33 904 aa22.78■■□□□ 1.24
UBE2D4-209ENST00000454428 EGFRP00533 1210 aa22.77■■□□□ 1.24
UBE2D4-209ENST00000454428 HCLS1P14317 486 aaPredicted RBP22.77■■□□□ 1.24
UBE2D4-209ENST00000454428 ZBTB12Q9Y330 459 aaPredicted RBP22.77■■□□□ 1.24
UBE2D4-209ENST00000454428 ANXA1P04083 346 aa22.76■■□□□ 1.23
UBE2D4-209ENST00000454428 SAMD7Q7Z3H4 446 aa22.76■■□□□ 1.23
UBE2D4-209ENST00000454428 COL4A1P02462 1669 aa22.75■■□□□ 1.23
UBE2D4-209ENST00000454428 H7C1D1 291 aa22.75■■□□□ 1.23
UBE2D4-209ENST00000454428 RGMBQ6NW40 437 aa22.75■■□□□ 1.23
UBE2D4-209ENST00000454428 NLRP10Q86W26 655 aa22.75■■□□□ 1.23
UBE2D4-209ENST00000454428 SOX10P56693 466 aa22.74■■□□□ 1.23
UBE2D4-209ENST00000454428 GRAPQ13588 217 aa22.74■■□□□ 1.23
UBE2D4-209ENST00000454428 NFE2L2Q16236 605 aa22.74■■□□□ 1.23
UBE2D4-209ENST00000454428 GRAPLQ8TC17 118 aaPredicted RBP22.74■■□□□ 1.23
UBE2D4-209ENST00000454428 SAGE1Q9NXZ1 904 aa22.74■■□□□ 1.23
UBE2D4-209ENST00000454428 DDX60Q8IY21 1712 aaKnown RBP22.74■■□□□ 1.23
UBE2D4-209ENST00000454428 PSMD14O00487 310 aa22.73■■□□□ 1.23
UBE2D4-209ENST00000454428 KIF23Q02241 960 aaPredicted RBP22.73■■□□□ 1.23
UBE2D4-209ENST00000454428 DPF2Q92785 391 aa22.73■■□□□ 1.23
UBE2D4-209ENST00000454428 ADM5C9JUS6 153 aa22.72■■□□□ 1.23
UBE2D4-209ENST00000454428 TBC1D10BQ4KMP7 808 aaPredicted RBP22.72■■□□□ 1.23
UBE2D4-209ENST00000454428 KRT26Q7Z3Y9 468 aa22.72■■□□□ 1.23
UBE2D4-209ENST00000454428 GBA2Q9HCG7 927 aaPredicted RBP22.72■■□□□ 1.23
UBE2D4-209ENST00000454428 RNF186Q9NXI6 227 aa22.72■■□□□ 1.23
UBE2D4-209ENST00000454428 AKAP11Q9UKA4 1901 aa22.72■■□□□ 1.23
UBE2D4-209ENST00000454428 DDX46Q7L014 1031 aaKnown RBP22.71■■□□□ 1.23
UBE2D4-209ENST00000454428 KCNQ5Q9NR82 932 aa22.71■■□□□ 1.23
UBE2D4-209ENST00000454428 EIF2S2P20042 333 aaKnown RBP22.7■■□□□ 1.22
UBE2D4-209ENST00000454428 DBNDD1Q9H9R9 158 aa22.7■■□□□ 1.22
UBE2D4-209ENST00000454428 RTL9Q8NET4 1388 aa22.7■■□□□ 1.22
UBE2D4-209ENST00000454428 TRPA1O75762 1119 aa22.69■■□□□ 1.22
UBE2D4-209ENST00000454428 CCDC102AQ96A19 550 aa22.69■■□□□ 1.22
UBE2D4-209ENST00000454428 TSPYL4Q9UJ04 414 aa22.69■■□□□ 1.22
UBE2D4-209ENST00000454428 SCN9AQ15858 1988 aa22.69■■□□□ 1.22
UBE2D4-209ENST00000454428 SH3TC1Q8TE82 1336 aa22.68■■□□□ 1.22
UBE2D4-209ENST00000454428 ZNF157P51786 506 aaPredicted RBP22.68■■□□□ 1.22
UBE2D4-209ENST00000454428 COPS6Q7L5N1 327 aa22.68■■□□□ 1.22
UBE2D4-209ENST00000454428 CSRNP1Q96S65 589 aa22.68■■□□□ 1.22
UBE2D4-209ENST00000454428 TRMT112Q9UI30 125 aaKnown RBP22.68■■□□□ 1.22
UBE2D4-209ENST00000454428 SLC10A3P09131 477 aa22.67■■□□□ 1.22
UBE2D4-209ENST00000454428 TCIRG1Q13488 830 aa22.67■■□□□ 1.22
UBE2D4-209ENST00000454428 WASHC4Q2M389 1173 aa22.67■■□□□ 1.22
UBE2D4-209ENST00000454428 TMC4Q7Z404 712 aa22.67■■□□□ 1.22
UBE2D4-209ENST00000454428 C2orf69Q8N8R5 385 aa22.67■■□□□ 1.22
UBE2D4-209ENST00000454428 XAGE3Q8WTP9 111 aa22.67■■□□□ 1.22
UBE2D4-209ENST00000454428 ZNF428Q96B54 188 aa22.67■■□□□ 1.22
UBE2D4-209ENST00000454428 POLLQ9UGP5 575 aa22.67■■□□□ 1.22
UBE2D4-209ENST00000454428 ASTN2O75129 1339 aaPredicted RBP22.66■■□□□ 1.22
UBE2D4-209ENST00000454428 HSP90AB3PQ58FF7 597 aa22.66■■□□□ 1.22
UBE2D4-209ENST00000454428 CELF1Q92879 486 aaKnown RBP22.66■■□□□ 1.22
UBE2D4-209ENST00000454428 RIMBP2O15034 1052 aa22.65■■□□□ 1.22
UBE2D4-209ENST00000454428 NEFMP07197 916 aa22.65■■□□□ 1.22
UBE2D4-209ENST00000454428 AIMP1Q12904 312 aaKnown RBP22.65■■□□□ 1.22
UBE2D4-209ENST00000454428 RBM26Q5T8P6 1007 aaKnown RBP22.65■■□□□ 1.22
UBE2D4-209ENST00000454428 ECE2O60344 883 aa22.64■■□□□ 1.21
UBE2D4-209ENST00000454428 RPS12P25398 132 aaKnown RBP22.64■■□□□ 1.21
UBE2D4-209ENST00000454428 GPSM2P81274 684 aa22.64■■□□□ 1.21
UBE2D4-209ENST00000454428 NECTIN2Q92692 538 aa22.64■■□□□ 1.21
UBE2D4-209ENST00000454428 DCPSQ96C86 337 aaKnown RBP22.64■■□□□ 1.21
UBE2D4-209ENST00000454428 NSFL1CQ9UNZ2 370 aaKnown RBP22.64■■□□□ 1.21
UBE2D4-209ENST00000454428 MKI67P46013 3256 aaKnown RBP22.63■■□□□ 1.21
UBE2D4-209ENST00000454428 DOK7Q18PE1 504 aa22.63■■□□□ 1.21
UBE2D4-209ENST00000454428 KIF4BQ2VIQ3 1234 aa22.62■■□□□ 1.21
UBE2D4-209ENST00000454428 PRPF38BQ5VTL8 546 aaKnown RBP22.62■■□□□ 1.21
UBE2D4-209ENST00000454428 CTU1Q7Z7A3 348 aaKnown RBP22.62■■□□□ 1.21
UBE2D4-209ENST00000454428 GGA3Q9NZ52 723 aa22.62■■□□□ 1.21
UBE2D4-209ENST00000454428 SF3B3Q15393 1217 aaKnown RBP22.61■■□□□ 1.21
UBE2D4-209ENST00000454428 RASAL3Q86YV0 1011 aa22.61■■□□□ 1.21
UBE2D4-209ENST00000454428 CDCA5Q96FF9 252 aa22.61■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms