RNA–Protein interactions for RNA: ENST00000453030.5

GARNL3-210, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 4

Gene GARNL3, Length 536 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-210ENST00000453030 MPNDQ8N594 471 aa15.24■□□□□ 0.03
GARNL3-210ENST00000453030 SUPT20HQ8NEM7 779 aa15.24■□□□□ 0.03
GARNL3-210ENST00000453030 RUNDC1Q96C34 613 aa15.24■□□□□ 0.03
GARNL3-210ENST00000453030 ZNRF3Q9ULT6 936 aa15.24■□□□□ 0.03
GARNL3-210ENST00000453030 WDR33Q9C0J8 1336 aaKnown RBP15.23■□□□□ 0.03
GARNL3-210ENST00000453030 GMPSP49915 693 aaPredicted RBP15.23■□□□□ 0.03
GARNL3-210ENST00000453030 CXCL9Q07325 125 aa15.23■□□□□ 0.03
GARNL3-210ENST00000453030 GRAPQ13588 217 aa15.23■□□□□ 0.03
GARNL3-210ENST00000453030 GRAPLQ8TC17 118 aaPredicted RBP15.23■□□□□ 0.03
GARNL3-210ENST00000453030 RTFDC1Q9BY42 306 aaPredicted RBP15.23■□□□□ 0.03
GARNL3-210ENST00000453030 ADARB2Q9NS39 739 aaKnown RBP15.23■□□□□ 0.03
GARNL3-210ENST00000453030 WBP1LQ9NX94 342 aa15.23■□□□□ 0.03
GARNL3-210ENST00000453030 GPRC5DQ9NZD1 345 aa15.23■□□□□ 0.03
GARNL3-210ENST00000453030 POLR2AP24928 1970 aaKnown RBP15.23■□□□□ 0.03
GARNL3-210ENST00000453030 BBOX1O75936 387 aa15.22■□□□□ 0.03
GARNL3-210ENST00000453030 RAD17O75943 681 aa15.22■□□□□ 0.03
GARNL3-210ENST00000453030 LBX1P52954 281 aa15.22■□□□□ 0.03
GARNL3-210ENST00000453030 KIAA2012Q0VF49 1180 aa15.22■□□□□ 0.03
GARNL3-210ENST00000453030 CIAPIN1Q6FI81 312 aa15.22■□□□□ 0.03
GARNL3-210ENST00000453030 SP8Q8IXZ3 490 aa15.22■□□□□ 0.03
GARNL3-210ENST00000453030 PRDM10Q9NQV6 1147 aa15.22■□□□□ 0.03
GARNL3-210ENST00000453030 SPEF2Q9C093 1822 aa15.22■□□□□ 0.03
GARNL3-210ENST00000453030 ATP5J2-PTCD1G3V325 749 aa15.21■□□□□ 0.03
GARNL3-210ENST00000453030 RTL5Q5HYW3 569 aaPredicted RBP15.21■□□□□ 0.03
GARNL3-210ENST00000453030 PLBD2Q8NHP8 589 aa15.21■□□□□ 0.03
GARNL3-210ENST00000453030 BCL2L13Q9BXK5 485 aa15.21■□□□□ 0.03
GARNL3-210ENST00000453030 VPS33BQ9H267 617 aa15.21■□□□□ 0.03
GARNL3-210ENST00000453030 ADAMTS8Q9UP79 889 aa15.21■□□□□ 0.03
GARNL3-210ENST00000453030 SCN9AQ15858 1988 aa15.2■□□□□ 0.02
GARNL3-210ENST00000453030 CYP4F22Q6NT55 531 aa15.2■□□□□ 0.02
GARNL3-210ENST00000453030 FAM89AQ96GI7 184 aa15.2■□□□□ 0.02
GARNL3-210ENST00000453030 CAPNS2Q96L46 248 aa15.2■□□□□ 0.02
GARNL3-210ENST00000453030 DBF4Q9UBU7 674 aaPredicted RBP15.2■□□□□ 0.02
GARNL3-210ENST00000453030 CDHR2Q9BYE9 1310 aa15.19■□□□□ 0.02
GARNL3-210ENST00000453030 MYH3P11055 1940 aa15.19■□□□□ 0.02
GARNL3-210ENST00000453030 YDJCA8MPS7 323 aa15.19■□□□□ 0.02
GARNL3-210ENST00000453030 HOXB7P09629 217 aa15.19■□□□□ 0.02
GARNL3-210ENST00000453030 HSPA8P11142 646 aaKnown RBP15.19■□□□□ 0.02
GARNL3-210ENST00000453030 MAP2K1Q02750 393 aaPredicted RBP15.19■□□□□ 0.02
GARNL3-210ENST00000453030 CST9Q5W186 159 aa15.19■□□□□ 0.02
GARNL3-210ENST00000453030 ANKRD13DQ6ZTN6 518 aa15.19■□□□□ 0.02
GARNL3-210ENST00000453030 ISCA1Q9BUE6 129 aa15.19■□□□□ 0.02
GARNL3-210ENST00000453030 PSME4Q14997 1843 aa15.18■□□□□ 0.02
GARNL3-210ENST00000453030 SHTN1A0MZ66 631 aa15.18■□□□□ 0.02
GARNL3-210ENST00000453030 TNIP1Q15025 636 aa15.18■□□□□ 0.02
GARNL3-210ENST00000453030 DUSP27Q5VZP5 1158 aa15.18■□□□□ 0.02
GARNL3-210ENST00000453030 TMC4Q7Z404 712 aa15.18■□□□□ 0.02
GARNL3-210ENST00000453030 TRPM4Q8TD43 1214 aa15.18■□□□□ 0.02
GARNL3-210ENST00000453030 CELF1Q92879 486 aaKnown RBP15.18■□□□□ 0.02
GARNL3-210ENST00000453030 GLIS2Q9BZE0 524 aaPredicted RBP15.18■□□□□ 0.02
GARNL3-210ENST00000453030 MBIPQ9NS73 344 aa15.18■□□□□ 0.02
GARNL3-210ENST00000453030 CELF2O95319 508 aaKnown RBP15.17■□□□□ 0.02
GARNL3-210ENST00000453030 ECE1P42892 770 aa15.17■□□□□ 0.02
GARNL3-210ENST00000453030 CFAP44Q96MT7 982 aa15.17■□□□□ 0.02
GARNL3-210ENST00000453030 ZNF408Q9H9D4 720 aa15.17■□□□□ 0.02
GARNL3-210ENST00000453030 DBNDD1Q9H9R9 158 aa15.17■□□□□ 0.02
GARNL3-210ENST00000453030 HYPKQ9NX55 129 aa15.17■□□□□ 0.02
GARNL3-210ENST00000453030 TLL2Q9Y6L7 1015 aa15.17■□□□□ 0.02
GARNL3-210ENST00000453030 CASP8AP2Q9UKL3 1982 aa15.16■□□□□ 0.02
GARNL3-210ENST00000453030 MICALL2Q8IY33 904 aa15.16■□□□□ 0.02
GARNL3-210ENST00000453030 GPR101Q96P66 508 aaPredicted RBP15.16■□□□□ 0.02
GARNL3-210ENST00000453030 NSFL1CQ9UNZ2 370 aaKnown RBP15.16■□□□□ 0.02
GARNL3-210ENST00000453030 ZBTB12Q9Y330 459 aaPredicted RBP15.16■□□□□ 0.02
GARNL3-210ENST00000453030 C6orf229H3BNL8 230 aa15.15■□□□□ 0.02
GARNL3-210ENST00000453030 IRS4O14654 1257 aaPredicted RBP15.15■□□□□ 0.02
GARNL3-210ENST00000453030 RIMBP2O15034 1052 aa15.15■□□□□ 0.02
GARNL3-210ENST00000453030 AOC2O75106 756 aa15.15■□□□□ 0.02
GARNL3-210ENST00000453030 HIRAP54198 1017 aaPredicted RBP15.15■□□□□ 0.02
GARNL3-210ENST00000453030 GPSM2P81274 684 aa15.15■□□□□ 0.02
GARNL3-210ENST00000453030 GOLGA2Q08379 1002 aa15.15■□□□□ 0.02
GARNL3-210ENST00000453030 SF3B3Q15393 1217 aaKnown RBP15.15■□□□□ 0.02
GARNL3-210ENST00000453030 WASHC4Q2M389 1173 aa15.15■□□□□ 0.02
GARNL3-210ENST00000453030 BEGAINQ9BUH8 593 aa15.15■□□□□ 0.02
GARNL3-210ENST00000453030 CNOT7Q9UIV1 285 aaKnown RBP15.15■□□□□ 0.02
GARNL3-210ENST00000453030 ELL2O00472 640 aaPredicted RBP15.14■□□□□ 0.01
GARNL3-210ENST00000453030 PSMD14O00487 310 aa15.14■□□□□ 0.01
GARNL3-210ENST00000453030 RIC3Q7Z5B4 369 aa15.14■□□□□ 0.01
GARNL3-210ENST00000453030 PHAXQ9H814 394 aaKnown RBP15.14■□□□□ 0.01
GARNL3-210ENST00000453030 PRKRIP1Q9H875 184 aaPredicted RBP15.14■□□□□ 0.01
GARNL3-210ENST00000453030 TSKSQ9UJT2 592 aa15.14■□□□□ 0.01
GARNL3-210ENST00000453030 H7C1D1 291 aa15.13■□□□□ 0.01
GARNL3-210ENST00000453030 APAF1O14727 1248 aa15.13■□□□□ 0.01
GARNL3-210ENST00000453030 ECE2O60344 883 aa15.13■□□□□ 0.01
GARNL3-210ENST00000453030 SAPCD2Q86UD0 394 aa15.13■□□□□ 0.01
GARNL3-210ENST00000453030 MYD88Q99836 296 aa15.13■□□□□ 0.01
GARNL3-210ENST00000453030 IFT57Q9NWB7 429 aa15.13■□□□□ 0.01
GARNL3-210ENST00000453030 POLLQ9UGP5 575 aa15.13■□□□□ 0.01
GARNL3-210ENST00000453030 ZNF853P0CG23 659 aa15.12■□□□□ 0.01
GARNL3-210ENST00000453030 DOK7Q18PE1 504 aa15.12■□□□□ 0.01
GARNL3-210ENST00000453030 TBC1D10BQ4KMP7 808 aaPredicted RBP15.12■□□□□ 0.01
GARNL3-210ENST00000453030 SAMD7Q7Z3H4 446 aa15.12■□□□□ 0.01
GARNL3-210ENST00000453030 ZC3H15Q8WU90 426 aaKnown RBP15.12■□□□□ 0.01
GARNL3-210ENST00000453030 PGAP2Q9UHJ9 254 aa15.12■□□□□ 0.01
GARNL3-210ENST00000453030 RTL9Q8NET4 1388 aa15.11■□□□□ 0.01
GARNL3-210ENST00000453030 EGFRP00533 1210 aa15.11■□□□□ 0.01
GARNL3-210ENST00000453030 GNAI1P63096 354 aa15.11■□□□□ 0.01
GARNL3-210ENST00000453030 TRIM28Q13263 835 aaKnown RBP15.11■□□□□ 0.01
GARNL3-210ENST00000453030 DLK2Q6UY11 383 aa15.11■□□□□ 0.01
GARNL3-210ENST00000453030 CDC37L1Q7L3B6 337 aa15.11■□□□□ 0.01
GARNL3-210ENST00000453030 ZBTB38Q8NAP3 1195 aaPredicted RBP15.11■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms