RNA–Protein interactions for RNA: ENST00000452489.6

PTPA-223, Transcript of protein phosphatase 2 phosphatase activator, humanhuman

TSL 1 (best) BASIC

Gene PTPA, Length 2,526 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPA-223ENST00000452489 FAM177A1Q8N128 213 aaPredicted RBP21.73■■□□□ 1.07
PTPA-223ENST00000452489 IL1RAPL2Q9NP60 686 aa21.73■■□□□ 1.07
PTPA-223ENST00000452489 TPCN1Q9ULQ1 816 aa21.73■■□□□ 1.07
PTPA-223ENST00000452489 ADGRB1O14514 1584 aa21.73■■□□□ 1.07
PTPA-223ENST00000452489 TTC41PQ6P2S7 1318 aa21.73■■□□□ 1.07
PTPA-223ENST00000452489 IFT172Q9UG01 1749 aa21.73■■□□□ 1.07
PTPA-223ENST00000452489 RPS6KA5O75582 802 aa21.73■■□□□ 1.07
PTPA-223ENST00000452489 VPS53Q5VIR6 699 aa21.73■■□□□ 1.07
PTPA-223ENST00000452489 NUTM1Q86Y26 1132 aa21.73■■□□□ 1.07
PTPA-223ENST00000452489 ZSCAN31Q96LW9 406 aaPredicted RBP21.73■■□□□ 1.07
PTPA-223ENST00000452489 BCCIPQ9P287 314 aaKnown RBP eCLIP21.73■■□□□ 1.07
PTPA-223ENST00000452489 MROH2AA6NES4 1674 aa21.72■■□□□ 1.07
PTPA-223ENST00000452489 MAP2K2P36507 400 aa21.72■■□□□ 1.07
PTPA-223ENST00000452489 CCDC30Q5VVM6 783 aa21.72■■□□□ 1.07
PTPA-223ENST00000452489 CCDC150Q8NCX0 1101 aa21.72■■□□□ 1.07
PTPA-223ENST00000452489 IMPACTQ9P2X3 320 aa21.72■■□□□ 1.07
PTPA-223ENST00000452489 TUBB4AP04350 444 aa21.72■■□□□ 1.07
PTPA-223ENST00000452489 MCM6Q14566 821 aa21.72■■□□□ 1.07
PTPA-223ENST00000452489 LARP1Q6PKG0 1096 aaKnown RBP21.72■■□□□ 1.07
PTPA-223ENST00000452489 XPO4Q9C0E2 1151 aaKnown RBP21.72■■□□□ 1.07
PTPA-223ENST00000452489 C14orf93Q9H972 538 aaKnown RBP21.72■■□□□ 1.07
PTPA-223ENST00000452489 RIMS2Q9UQ26 1411 aa21.72■■□□□ 1.07
PTPA-223ENST00000452489 ADCY9O60503 1353 aa21.72■■□□□ 1.07
PTPA-223ENST00000452489 LRRC31Q6UY01 552 aa21.71■■□□□ 1.07
PTPA-223ENST00000452489 ANKRD20A12PQ8NF67 263 aa21.71■■□□□ 1.07
PTPA-223ENST00000452489 MAP2K7O14733 419 aa21.71■■□□□ 1.07
PTPA-223ENST00000452489 CPP00450 1065 aa21.71■■□□□ 1.07
PTPA-223ENST00000452489 FBLN2P98095 1184 aa21.71■■□□□ 1.07
PTPA-223ENST00000452489 APOBRQ0VD83 1088 aa21.71■■□□□ 1.07
PTPA-223ENST00000452489 AKAP2Q9Y2D5 859 aa21.71■■□□□ 1.07
PTPA-223ENST00000452489 FAN1Q9Y2M0 1017 aa21.71■■□□□ 1.07
PTPA-223ENST00000452489 PATL2C9JE40 543 aaKnown RBP21.7■■□□□ 1.06
PTPA-223ENST00000452489 COL9A3Q14050 684 aaPredicted RBP21.7■■□□□ 1.06
PTPA-223ENST00000452489 TET3O43151 1660 aa21.7■■□□□ 1.06
PTPA-223ENST00000452489 CEP89Q96ST8 783 aa21.7■■□□□ 1.06
PTPA-223ENST00000452489 IFNKQ9P0W0 207 aa21.7■■□□□ 1.06
PTPA-223ENST00000452489 CDC42BPGQ6DT37 1551 aa21.7■■□□□ 1.06
PTPA-223ENST00000452489 KCNJ6P48051 423 aa21.69■■□□□ 1.06
PTPA-223ENST00000452489 CEBPZQ03701 1054 aaKnown RBP21.69■■□□□ 1.06
PTPA-223ENST00000452489 RSRC2Q7L4I2 434 aaKnown RBP21.69■■□□□ 1.06
PTPA-223ENST00000452489 PPP6R1Q9UPN7 881 aa21.69■■□□□ 1.06
PTPA-223ENST00000452489 ATP6V1AP38606 617 aa21.69■■□□□ 1.06
PTPA-223ENST00000452489 PPP2R3AQ06190 1150 aa21.69■■□□□ 1.06
PTPA-223ENST00000452489 TTLL5Q6EMB2 1281 aa21.69■■□□□ 1.06
PTPA-223ENST00000452489 PRPF40BQ6NWY9 871 aaKnown RBP21.69■■□□□ 1.06
PTPA-223ENST00000452489 MICALL1Q8N3F8 863 aa21.69■■□□□ 1.06
PTPA-223ENST00000452489 CHMP7Q8WUX9 453 aaPredicted RBP21.69■■□□□ 1.06
PTPA-223ENST00000452489 CYP46A1Q9Y6A2 500 aa21.69■■□□□ 1.06
PTPA-223ENST00000452489 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP21.69■■□□□ 1.06
PTPA-223ENST00000452489 GNAI2P04899 355 aa21.68■■□□□ 1.06
PTPA-223ENST00000452489 PLEKHO1Q53GL0 409 aaPredicted RBP21.68■■□□□ 1.06
PTPA-223ENST00000452489 TADA2BQ86TJ2 420 aa21.68■■□□□ 1.06
PTPA-223ENST00000452489 EFCAB13Q8IY85 973 aa21.68■■□□□ 1.06
PTPA-223ENST00000452489 ZSWIM6Q9HCJ5 1215 aa21.68■■□□□ 1.06
PTPA-223ENST00000452489 MKRN1Q9UHC7 482 aaKnown RBP21.68■■□□□ 1.06
PTPA-223ENST00000452489 SATB1Q01826 763 aa21.67■■□□□ 1.06
PTPA-223ENST00000452489 PTH1RQ03431 593 aa21.67■■□□□ 1.06
PTPA-223ENST00000452489 KAT2BQ92831 832 aa21.67■■□□□ 1.06
PTPA-223ENST00000452489 GOLPH3LQ9H4A5 285 aa21.67■■□□□ 1.06
PTPA-223ENST00000452489 MED4Q9NPJ6 270 aa21.67■■□□□ 1.06
PTPA-223ENST00000452489 CFAP65Q6ZU64 1925 aaKnown RBP21.67■■□□□ 1.06
PTPA-223ENST00000452489 SRGAP3O43295 1099 aa21.67■■□□□ 1.06
PTPA-223ENST00000452489 SLC4A2P04920 1241 aa21.67■■□□□ 1.06
PTPA-223ENST00000452489 PDCP20941 246 aa21.67■■□□□ 1.06
PTPA-223ENST00000452489 TDO2P48775 406 aa21.67■■□□□ 1.06
PTPA-223ENST00000452489 CEP57L1Q8IYX8 460 aa21.67■■□□□ 1.06
PTPA-223ENST00000452489 ANO10Q9NW15 660 aa21.67■■□□□ 1.06
PTPA-223ENST00000452489 CD163L1Q9NR16 1453 aa21.67■■□□□ 1.06
PTPA-223ENST00000452489 KIF1CO43896 1103 aaKnown RBP21.66■■□□□ 1.06
PTPA-223ENST00000452489 SKIDA1Q1XH10 827 aa21.66■■□□□ 1.06
PTPA-223ENST00000452489 G2E3Q7L622 706 aa21.66■■□□□ 1.06
PTPA-223ENST00000452489 DNAAF4Q8WXU2 420 aa21.66■■□□□ 1.06
PTPA-223ENST00000452489 PUS7Q96PZ0 661 aaKnown RBP21.66■■□□□ 1.06
PTPA-223ENST00000452489 KIF1BO60333 1816 aa21.66■■□□□ 1.06
PTPA-223ENST00000452489 DDX11Q96FC9 970 aa21.66■■□□□ 1.06
PTPA-223ENST00000452489 WDR24Q96S15 920 aa21.66■■□□□ 1.06
PTPA-223ENST00000452489 BICC1Q9H694 974 aaKnown RBP21.66■■□□□ 1.06
PTPA-223ENST00000452489 RABGGTAQ92696 567 aa21.65■■□□□ 1.06
PTPA-223ENST00000452489 TCEANC2Q96MN5 208 aa21.65■■□□□ 1.06
PTPA-223ENST00000452489 SUGCTQ9HAC7 445 aa21.65■■□□□ 1.06
PTPA-223ENST00000452489 NRDCO43847 1150 aa21.65■■□□□ 1.06
PTPA-223ENST00000452489 PHACTR2O75167 634 aa21.65■■□□□ 1.06
PTPA-223ENST00000452489 MAP3K9P80192 1104 aa21.65■■□□□ 1.06
PTPA-223ENST00000452489 WWC2Q6AWC2 1192 aa21.65■■□□□ 1.06
PTPA-223ENST00000452489 ZSWIM4Q9H7M6 989 aa21.65■■□□□ 1.06
PTPA-223ENST00000452489 CCDC151A5D8V7 595 aa21.64■■□□□ 1.06
PTPA-223ENST00000452489 ZRSR1Q15695 479 aaKnown RBP21.64■■□□□ 1.06
PTPA-223ENST00000452489 ISM2Q6H9L7 571 aa21.64■■□□□ 1.06
PTPA-223ENST00000452489 CCAR1Q8IX12 1150 aaKnown RBP21.64■■□□□ 1.06
PTPA-223ENST00000452489 UTP14AQ9BVJ6 771 aaKnown RBP21.64■■□□□ 1.06
PTPA-223ENST00000452489 CCDC189A1A4V9 331 aa21.64■■□□□ 1.05
PTPA-223ENST00000452489 MNAT1P51948 309 aa21.64■■□□□ 1.05
PTPA-223ENST00000452489 MRFAP1Q9Y605 127 aa21.64■■□□□ 1.05
PTPA-223ENST00000452489 VWA3AA6NCI4 1184 aa21.63■■□□□ 1.05
PTPA-223ENST00000452489 TRHP20396 242 aaPredicted RBP21.63■■□□□ 1.05
PTPA-223ENST00000452489 GOLGA8FQ08AF8 430 aa21.63■■□□□ 1.05
PTPA-223ENST00000452489 GOLGA8DPQ0D2H9 430 aa21.63■■□□□ 1.05
PTPA-223ENST00000452489 EGFL6Q8IUX8 553 aa21.63■■□□□ 1.05
PTPA-223ENST00000452489 CNNM3Q8NE01 707 aa21.63■■□□□ 1.05
PTPA-223ENST00000452489 PI4K2BQ8TCG2 481 aa21.63■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 112.4 ms