RNA–Protein interactions for RNA: ENST00000452162.5

PKP4-206, Transcript of plakophilin 4, humanhuman

TSL 1 (best)

Gene PKP4, Length 2,359 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-206ENST00000452162 CARMIL3Q8ND23 1372 aa13.15□□□□□ -0.3
PKP4-206ENST00000452162 FAM177BA6PVY3 158 aa13.15□□□□□ -0.3
PKP4-206ENST00000452162 ALDH1L1O75891 902 aa13.15□□□□□ -0.3
PKP4-206ENST00000452162 PPP1R42Q7Z4L9 355 aa13.15□□□□□ -0.3
PKP4-206ENST00000452162 HSCBQ8IWL3 235 aa13.15□□□□□ -0.3
PKP4-206ENST00000452162 CCDC24Q8N4L8 307 aa13.15□□□□□ -0.3
PKP4-206ENST00000452162 PLBD2Q8NHP8 589 aa13.15□□□□□ -0.3
PKP4-206ENST00000452162 MAP3K2Q9Y2U5 619 aa13.15□□□□□ -0.3
PKP4-206ENST00000452162 UBN2Q6ZU65 1347 aa13.14□□□□□ -0.31
PKP4-206ENST00000452162 C10orf71Q711Q0 1435 aa13.14□□□□□ -0.31
PKP4-206ENST00000452162 ZNF34Q8IZ26 560 aa13.14□□□□□ -0.31
PKP4-206ENST00000452162 FRAT2O75474 233 aaPredicted RBP13.14□□□□□ -0.31
PKP4-206ENST00000452162 STAP2Q9UGK3 403 aa13.14□□□□□ -0.31
PKP4-206ENST00000452162 CD2APQ9Y5K6 639 aa13.14□□□□□ -0.31
PKP4-206ENST00000452162 ANKRD31Q8N7Z5 1873 aa13.13□□□□□ -0.31
PKP4-206ENST00000452162 MX1P20591 662 aa13.13□□□□□ -0.31
PKP4-206ENST00000452162 RIC3Q7Z5B4 369 aa13.13□□□□□ -0.31
PKP4-206ENST00000452162 KIAA1551Q9HCM1 1747 aa13.13□□□□□ -0.31
PKP4-206ENST00000452162 RAB11FIP3O75154 756 aa13.13□□□□□ -0.31
PKP4-206ENST00000452162 TCIRG1Q13488 830 aa13.13□□□□□ -0.31
PKP4-206ENST00000452162 PRR5LQ6MZQ0 368 aa13.13□□□□□ -0.31
PKP4-206ENST00000452162 NBPF5PQ86XG9 351 aaPredicted RBP13.13□□□□□ -0.31
PKP4-206ENST00000452162 AOX1Q06278 1338 aa13.12□□□□□ -0.31
PKP4-206ENST00000452162 MTX1Q13505 466 aa13.12□□□□□ -0.31
PKP4-206ENST00000452162 CASC1Q6TDU7 716 aa13.12□□□□□ -0.31
PKP4-206ENST00000452162 USP26Q9BXU7 913 aa13.12□□□□□ -0.31
PKP4-206ENST00000452162 ATP5J2-PTCD1G3V325 749 aa13.12□□□□□ -0.31
PKP4-206ENST00000452162 SRGAP3O43295 1099 aa13.12□□□□□ -0.31
PKP4-206ENST00000452162 SUSD4Q5VX71 490 aa13.12□□□□□ -0.31
PKP4-206ENST00000452162 CNBD1Q8NA66 436 aa13.12□□□□□ -0.31
PKP4-206ENST00000452162 DDX58O95786 925 aaKnown RBP13.11□□□□□ -0.31
PKP4-206ENST00000452162 HSP90AB3PQ58FF7 597 aa13.11□□□□□ -0.31
PKP4-206ENST00000452162 TSHZ3Q63HK5 1081 aa13.11□□□□□ -0.31
PKP4-206ENST00000452162 UTYO14607 1347 aa13.11□□□□□ -0.31
PKP4-206ENST00000452162 NPHP1O15259 732 aa13.1□□□□□ -0.31
PKP4-206ENST00000452162 SURF6O75683 361 aaKnown RBP13.1□□□□□ -0.31
PKP4-206ENST00000452162 NUTM1Q86Y26 1132 aa13.1□□□□□ -0.31
PKP4-206ENST00000452162 LINS1Q8NG48 757 aa13.1□□□□□ -0.31
PKP4-206ENST00000452162 DDIT3P35638 169 aa13.1□□□□□ -0.31
PKP4-206ENST00000452162 CWF19L2Q2TBE0 894 aaKnown RBP13.1□□□□□ -0.31
PKP4-206ENST00000452162 TPTE2Q6XPS3 522 aa13.1□□□□□ -0.31
PKP4-206ENST00000452162 NLRP10Q86W26 655 aa13.1□□□□□ -0.31
PKP4-206ENST00000452162 SPRYD3Q8NCJ5 442 aa13.1□□□□□ -0.31
PKP4-206ENST00000452162 MYD88Q99836 296 aa13.1□□□□□ -0.31
PKP4-206ENST00000452162 ISCA1Q9BUE6 129 aa13.1□□□□□ -0.31
PKP4-206ENST00000452162 WWC3Q9ULE0 1092 aa13.1□□□□□ -0.31
PKP4-206ENST00000452162 A0A0G2JLW4 131 aa13.09□□□□□ -0.31
PKP4-206ENST00000452162 CD2BP2O95400 341 aaKnown RBP13.09□□□□□ -0.31
PKP4-206ENST00000452162 NTSR2O95665 410 aa13.09□□□□□ -0.31
PKP4-206ENST00000452162 RHPN1Q8TCX5 695 aa13.09□□□□□ -0.31
PKP4-206ENST00000452162 METTL22Q9BUU2 404 aaPredicted RBP13.09□□□□□ -0.31
PKP4-206ENST00000452162 IL1RAPL2Q9NP60 686 aa13.09□□□□□ -0.31
PKP4-206ENST00000452162 BRCA1P38398 1863 aaKnown RBP13.09□□□□□ -0.31
PKP4-206ENST00000452162 ERC2O15083 957 aa13.09□□□□□ -0.31
PKP4-206ENST00000452162 DPEP1P16444 411 aa13.09□□□□□ -0.31
PKP4-206ENST00000452162 CHRNA5P30532 468 aa13.09□□□□□ -0.31
PKP4-206ENST00000452162 PARP10Q53GL7 1025 aa13.09□□□□□ -0.31
PKP4-206ENST00000452162 KIF1BPQ96EK5 621 aa13.09□□□□□ -0.31
PKP4-206ENST00000452162 C9orf78Q9NZ63 289 aaPredicted RBP13.09□□□□□ -0.31
PKP4-206ENST00000452162 CHMP5Q9NZZ3 219 aa13.09□□□□□ -0.31
PKP4-206ENST00000452162 GTF2E1P29083 439 aaPredicted RBP13.08□□□□□ -0.32
PKP4-206ENST00000452162 TGFB2P61812 414 aa13.08□□□□□ -0.32
PKP4-206ENST00000452162 ST5P78524 1137 aa13.08□□□□□ -0.32
PKP4-206ENST00000452162 ERFEQ4G0M1 354 aa13.08□□□□□ -0.32
PKP4-206ENST00000452162 SYNE4Q8N205 404 aa13.08□□□□□ -0.32
PKP4-206ENST00000452162 ABCC12Q96J65 1359 aa13.08□□□□□ -0.32
PKP4-206ENST00000452162 COL11A2P13942 1736 aaPredicted RBP13.08□□□□□ -0.32
PKP4-206ENST00000452162 GRM8O00222 908 aa13.08□□□□□ -0.32
PKP4-206ENST00000452162 REC8O95072 547 aa13.08□□□□□ -0.32
PKP4-206ENST00000452162 KCNA3P22001 575 aa13.08□□□□□ -0.32
PKP4-206ENST00000452162 RABEP1Q15276 862 aa13.08□□□□□ -0.32
PKP4-206ENST00000452162 HSP90AB4PQ58FF6 505 aa13.08□□□□□ -0.32
PKP4-206ENST00000452162 UTP14AQ9BVJ6 771 aaKnown RBP13.08□□□□□ -0.32
PKP4-206ENST00000452162 BRIP1Q9BX63 1249 aa13.08□□□□□ -0.32
PKP4-206ENST00000452162 NYXQ9GZU5 481 aa13.08□□□□□ -0.32
PKP4-206ENST00000452162 HDAC5Q9UQL6 1122 aa13.08□□□□□ -0.32
PKP4-206ENST00000452162 TNRC6CQ9HCJ0 1690 aaKnown RBP13.07□□□□□ -0.32
PKP4-206ENST00000452162 IGKV5-2P06315 115 aa13.07□□□□□ -0.32
PKP4-206ENST00000452162 K7ELQ4 463 aaPredicted RBP13.07□□□□□ -0.32
PKP4-206ENST00000452162 TRIM28Q13263 835 aaKnown RBP13.07□□□□□ -0.32
PKP4-206ENST00000452162 KAZALD1Q96I82 304 aa13.07□□□□□ -0.32
PKP4-206ENST00000452162 TRMT112Q9UI30 125 aaKnown RBP13.07□□□□□ -0.32
PKP4-206ENST00000452162 DLEC1Q9Y238 1755 aa13.06□□□□□ -0.32
PKP4-206ENST00000452162 PI4K2BQ8TCG2 481 aa13.06□□□□□ -0.32
PKP4-206ENST00000452162 SUCLG2Q96I99 432 aa13.06□□□□□ -0.32
PKP4-206ENST00000452162 ESYT1Q9BSJ8 1104 aa13.06□□□□□ -0.32
PKP4-206ENST00000452162 CACNA1SQ13698 1873 aa13.06□□□□□ -0.32
PKP4-206ENST00000452162 CHMLP26374 656 aa13.06□□□□□ -0.32
PKP4-206ENST00000452162 C2CD5Q86YS7 1000 aa13.06□□□□□ -0.32
PKP4-206ENST00000452162 NEURL1BA8MQ27 555 aa13.05□□□□□ -0.32
PKP4-206ENST00000452162 PDE6BP35913 854 aa13.05□□□□□ -0.32
PKP4-206ENST00000452162 NEXNQ0ZGT2 675 aa13.05□□□□□ -0.32
PKP4-206ENST00000452162 JARID2Q92833 1246 aaPredicted RBP13.05□□□□□ -0.32
PKP4-206ENST00000452162 FAM89AQ96GI7 184 aa13.05□□□□□ -0.32
PKP4-206ENST00000452162 LAMB2P55268 1798 aa13.05□□□□□ -0.32
PKP4-206ENST00000452162 DDX60Q8IY21 1712 aaKnown RBP13.05□□□□□ -0.32
PKP4-206ENST00000452162 CCDC191Q8NCU4 936 aa13.05□□□□□ -0.32
PKP4-206ENST00000452162 TRIM6-TRIM34B2RNG4 842 aa13.04□□□□□ -0.32
PKP4-206ENST00000452162 H0YIN7 160 aa13.04□□□□□ -0.32
PKP4-206ENST00000452162 HCLS1P14317 486 aaPredicted RBP13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 64.1 ms