RNA–Protein interactions for RNA: ENST00000450829.5

TM9SF4-205, Transcript of transmembrane 9 superfamily member 4, humanhuman

TSL 4

Gene TM9SF4, Length 550 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF4-205ENST00000450829 AKAP11Q9UKA4 1901 aa7.11□□□□□ -1.27
TM9SF4-205ENST00000450829 SBF1O95248 1867 aa7.11□□□□□ -1.27
TM9SF4-205ENST00000450829 LAMA4Q16363 1823 aa7.11□□□□□ -1.27
TM9SF4-205ENST00000450829 USP42Q9H9J4 1324 aaKnown RBP7.11□□□□□ -1.27
TM9SF4-205ENST00000450829 GNPATO15228 680 aa7.11□□□□□ -1.27
TM9SF4-205ENST00000450829 SURF6O75683 361 aaKnown RBP7.11□□□□□ -1.27
TM9SF4-205ENST00000450829 CYP19A1P11511 503 aaPredicted RBP7.11□□□□□ -1.27
TM9SF4-205ENST00000450829 MX1P20591 662 aa7.11□□□□□ -1.27
TM9SF4-205ENST00000450829 MFAP1P55081 439 aaKnown RBP7.11□□□□□ -1.27
TM9SF4-205ENST00000450829 C1QTNF8P60827 252 aa7.11□□□□□ -1.27
TM9SF4-205ENST00000450829 RABL6Q3YEC7 729 aaPredicted RBP7.11□□□□□ -1.27
TM9SF4-205ENST00000450829 HSP90AB4PQ58FF6 505 aa7.11□□□□□ -1.27
TM9SF4-205ENST00000450829 TBC1D9Q6ZT07 1266 aa7.11□□□□□ -1.27
TM9SF4-205ENST00000450829 RHPN1Q8TCX5 695 aa7.11□□□□□ -1.27
TM9SF4-205ENST00000450829 KIF1BPQ96EK5 621 aa7.11□□□□□ -1.27
TM9SF4-205ENST00000450829 STAP2Q9UGK3 403 aa7.11□□□□□ -1.27
TM9SF4-205ENST00000450829 TAF1P21675 1872 aa7.11□□□□□ -1.27
TM9SF4-205ENST00000450829 NRXN2Q9P2S2 1712 aa7.1□□□□□ -1.27
TM9SF4-205ENST00000450829 MAP3K15Q6ZN16 1313 aa7.1□□□□□ -1.27
TM9SF4-205ENST00000450829 CNTNAP4Q9C0A0 1308 aa7.1□□□□□ -1.27
TM9SF4-205ENST00000450829 STARD3NLO95772 234 aa7.1□□□□□ -1.27
TM9SF4-205ENST00000450829 KIF6Q6ZMV9 814 aa7.1□□□□□ -1.27
TM9SF4-205ENST00000450829 UBE3BQ7Z3V4 1068 aa7.1□□□□□ -1.27
TM9SF4-205ENST00000450829 ERC1Q8IUD2 1116 aa7.1□□□□□ -1.27
TM9SF4-205ENST00000450829 ISCA1Q9BUE6 129 aa7.1□□□□□ -1.27
TM9SF4-205ENST00000450829 ZBTB3Q9H5J0 574 aa7.1□□□□□ -1.27
TM9SF4-205ENST00000450829 CWC25Q9NXE8 425 aaPredicted RBP7.1□□□□□ -1.27
TM9SF4-205ENST00000450829 ZNF609O15014 1411 aa7.1□□□□□ -1.27
TM9SF4-205ENST00000450829 ANKRD31Q8N7Z5 1873 aa7.09□□□□□ -1.27
TM9SF4-205ENST00000450829 A0A087WZG4 1122 aa7.09□□□□□ -1.27
TM9SF4-205ENST00000450829 ATP5J2-PTCD1G3V325 749 aa7.09□□□□□ -1.27
TM9SF4-205ENST00000450829 H7C1W4 665 aa7.09□□□□□ -1.27
TM9SF4-205ENST00000450829 GRIN3BO60391 1043 aa7.09□□□□□ -1.27
TM9SF4-205ENST00000450829 MMP10P09238 476 aa7.09□□□□□ -1.27
TM9SF4-205ENST00000450829 SDSP20132 328 aa7.09□□□□□ -1.27
TM9SF4-205ENST00000450829 ATP6V1AP38606 617 aa7.09□□□□□ -1.27
TM9SF4-205ENST00000450829 RBM25P49756 843 aaKnown RBP7.09□□□□□ -1.27
TM9SF4-205ENST00000450829 EPHA10Q5JZY3 1008 aa7.09□□□□□ -1.27
TM9SF4-205ENST00000450829 CCDC191Q8NCU4 936 aa7.09□□□□□ -1.27
TM9SF4-205ENST00000450829 IL1RAPL2Q9NP60 686 aa7.09□□□□□ -1.27
TM9SF4-205ENST00000450829 WWC3Q9ULE0 1092 aa7.09□□□□□ -1.27
TM9SF4-205ENST00000450829 PA2G4Q9UQ80 394 aaKnown RBP7.09□□□□□ -1.27
TM9SF4-205ENST00000450829 ZBTB1Q9Y2K1 713 aa7.09□□□□□ -1.27
TM9SF4-205ENST00000450829 CCDC88AQ3V6T2 1871 aa7.09□□□□□ -1.28
TM9SF4-205ENST00000450829 COL11A2P13942 1736 aaPredicted RBP7.08□□□□□ -1.28
TM9SF4-205ENST00000450829 CAPN15O75808 1086 aa7.08□□□□□ -1.28
TM9SF4-205ENST00000450829 HMGB2P26583 209 aaKnown RBP7.08□□□□□ -1.28
TM9SF4-205ENST00000450829 IL6STP40189 918 aaPredicted RBP7.08□□□□□ -1.28
TM9SF4-205ENST00000450829 RFX5P48382 616 aaPredicted RBP7.08□□□□□ -1.28
TM9SF4-205ENST00000450829 TRIM28Q13263 835 aaKnown RBP7.08□□□□□ -1.28
TM9SF4-205ENST00000450829 OS9Q13438 667 aaPredicted RBP7.08□□□□□ -1.28
TM9SF4-205ENST00000450829 TCIRG1Q13488 830 aa7.08□□□□□ -1.28
TM9SF4-205ENST00000450829 TSHZ3Q63HK5 1081 aa7.08□□□□□ -1.28
TM9SF4-205ENST00000450829 GIGYF2Q6Y7W6 1299 aaKnown RBP7.08□□□□□ -1.28
TM9SF4-205ENST00000450829 PI4K2BQ8TCG2 481 aa7.08□□□□□ -1.28
TM9SF4-205ENST00000450829 C22orf23Q9BZE7 217 aa7.08□□□□□ -1.28
TM9SF4-205ENST00000450829 TNRC6CQ9HCJ0 1690 aaKnown RBP7.08□□□□□ -1.28
TM9SF4-205ENST00000450829 TTC41PQ6P2S7 1318 aa7.07□□□□□ -1.28
TM9SF4-205ENST00000450829 CDHR2Q9BYE9 1310 aa7.07□□□□□ -1.28
TM9SF4-205ENST00000450829 CACNA1SQ13698 1873 aa7.07□□□□□ -1.28
TM9SF4-205ENST00000450829 SASH1O94885 1247 aa7.07□□□□□ -1.28
TM9SF4-205ENST00000450829 PCCAP05165 728 aaPredicted RBP7.07□□□□□ -1.28
TM9SF4-205ENST00000450829 GYS1P13807 737 aa7.07□□□□□ -1.28
TM9SF4-205ENST00000450829 FOXO4P98177 505 aa7.07□□□□□ -1.28
TM9SF4-205ENST00000450829 HSP90AB3PQ58FF7 597 aa7.07□□□□□ -1.28
TM9SF4-205ENST00000450829 RC3H1Q5TC82 1133 aaKnown RBP7.07□□□□□ -1.28
TM9SF4-205ENST00000450829 CASC1Q6TDU7 716 aa7.07□□□□□ -1.28
TM9SF4-205ENST00000450829 NUTM1Q86Y26 1132 aa7.07□□□□□ -1.28
TM9SF4-205ENST00000450829 CLASRPQ8N2M8 674 aaKnown RBP7.07□□□□□ -1.28
TM9SF4-205ENST00000450829 PKNOX2Q96KN3 472 aa7.07□□□□□ -1.28
TM9SF4-205ENST00000450829 COPRSQ9NQ92 184 aa7.07□□□□□ -1.28
TM9SF4-205ENST00000450829 CCDC87Q9NVE4 849 aa7.07□□□□□ -1.28
TM9SF4-205ENST00000450829 ZNF330Q9Y3S2 320 aaPredicted RBP7.07□□□□□ -1.28
TM9SF4-205ENST00000450829 RIC1Q4ADV7 1423 aa7.07□□□□□ -1.28
TM9SF4-205ENST00000450829 TIAM2Q8IVF5 1701 aa7.07□□□□□ -1.28
TM9SF4-205ENST00000450829 ERVV-1B6SEH8 477 aa7.06□□□□□ -1.28
TM9SF4-205ENST00000450829 RPS6KA4O75676 772 aa7.06□□□□□ -1.28
TM9SF4-205ENST00000450829 CRKLP46109 303 aaKnown RBP7.06□□□□□ -1.28
TM9SF4-205ENST00000450829 EIF5P55010 431 aaKnown RBP7.06□□□□□ -1.28
TM9SF4-205ENST00000450829 PTPN12Q05209 780 aaKnown RBP7.06□□□□□ -1.28
TM9SF4-205ENST00000450829 DDR1Q08345 913 aa7.06□□□□□ -1.28
TM9SF4-205ENST00000450829 G3BP1Q13283 466 aaKnown RBP eCLIP7.06□□□□□ -1.28
TM9SF4-205ENST00000450829 INTS5Q6P9B9 1019 aaKnown RBP7.06□□□□□ -1.28
TM9SF4-205ENST00000450829 JARID2Q92833 1246 aaPredicted RBP7.06□□□□□ -1.28
TM9SF4-205ENST00000450829 ARHGEF1Q92888 912 aaKnown RBP7.06□□□□□ -1.28
TM9SF4-205ENST00000450829 GPATCH3Q96I76 525 aa7.06□□□□□ -1.28
TM9SF4-205ENST00000450829 PLA2G12BQ9BX93 195 aa7.06□□□□□ -1.28
TM9SF4-205ENST00000450829 RTCBQ9Y3I0 505 aaKnown RBP7.06□□□□□ -1.28
TM9SF4-205ENST00000450829 COL4A1P02462 1669 aa7.06□□□□□ -1.28
TM9SF4-205ENST00000450829 MAST2Q6P0Q8 1798 aa7.05□□□□□ -1.28
TM9SF4-205ENST00000450829 UBN2Q6ZU65 1347 aa7.05□□□□□ -1.28
TM9SF4-205ENST00000450829 GLRX3O76003 335 aaKnown RBP7.05□□□□□ -1.28
TM9SF4-205ENST00000450829 PDIA4P13667 645 aaKnown RBP7.05□□□□□ -1.28
TM9SF4-205ENST00000450829 BECN1Q14457 450 aa7.05□□□□□ -1.28
TM9SF4-205ENST00000450829 HLFQ16534 295 aa7.05□□□□□ -1.28
TM9SF4-205ENST00000450829 LMBR1LQ6UX01 489 aa7.05□□□□□ -1.28
TM9SF4-205ENST00000450829 AACSQ86V21 672 aa7.05□□□□□ -1.28
TM9SF4-205ENST00000450829 NLRP10Q86W26 655 aa7.05□□□□□ -1.28
TM9SF4-205ENST00000450829 DZIP3Q86Y13 1208 aaKnown RBP7.05□□□□□ -1.28
TM9SF4-205ENST00000450829 KLHDC4Q8TBB5 520 aa7.05□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms