RNA–Protein interactions for RNA: ENST00000449544.5

HCG18-238, Transcript of HLA complex group 18, human

TSL 2 BASIC

Gene HCG18, Length 4,262 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HCG18-238	ENST00000449544	FANCI	Q9NVI1	1328 aa		10.2	□□□□□ -0.78
HCG18-238	ENST00000449544	HEG1	Q9ULI3	1381 aa		10.2	□□□□□ -0.78
HCG18-238	ENST00000449544	TBC1D9B	Q66K14	1250 aa		10.2	□□□□□ -0.78
HCG18-238	ENST00000449544	C8orf58	Q8NAV2	365 aa		10.2	□□□□□ -0.78
HCG18-238	ENST00000449544	SLC10A4	Q96EP9	437 aa		10.2	□□□□□ -0.78
HCG18-238	ENST00000449544	METTL22	Q9BUU2	404 aa	Predicted RBP	10.2	□□□□□ -0.78
HCG18-238	ENST00000449544	RRAGC	Q9HB90	399 aa		10.2	□□□□□ -0.78
HCG18-238	ENST00000449544	UQCRFS1P1	P0C7P4	283 aa		10.2	□□□□□ -0.78
HCG18-238	ENST00000449544	TBC1D10B	Q4KMP7	808 aa	Predicted RBP	10.2	□□□□□ -0.78
HCG18-238	ENST00000449544	KRT26	Q7Z3Y9	468 aa		10.2	□□□□□ -0.78
HCG18-238	ENST00000449544	ZNF444	Q8N0Y2	327 aa	Predicted RBP	10.2	□□□□□ -0.78
HCG18-238	ENST00000449544	RASSF8	Q8NHQ8	419 aa		10.2	□□□□□ -0.78
HCG18-238	ENST00000449544	NEURL4	Q96JN8	1562 aa		10.2	□□□□□ -0.78
HCG18-238	ENST00000449544	MROH2A	A6NES4	1674 aa		10.2	□□□□□ -0.78
HCG18-238	ENST00000449544	CYP19A1	P11511	503 aa	Predicted RBP	10.19	□□□□□ -0.78
HCG18-238	ENST00000449544	IBSP	P21815	317 aa	Predicted RBP	10.19	□□□□□ -0.78
HCG18-238	ENST00000449544	SLC4A8	Q2Y0W8	1093 aa		10.19	□□□□□ -0.78
HCG18-238	ENST00000449544	DCAF15	Q66K64	600 aa		10.19	□□□□□ -0.78
HCG18-238	ENST00000449544	TTF2	Q9UNY4	1162 aa	Known RBP	10.19	□□□□□ -0.78
HCG18-238	ENST00000449544	ERVV-1	B6SEH8	477 aa		10.19	□□□□□ -0.78
HCG18-238	ENST00000449544	PLCG2	P16885	1265 aa		10.19	□□□□□ -0.78
HCG18-238	ENST00000449544	PLS1	Q14651	629 aa		10.19	□□□□□ -0.78
HCG18-238	ENST00000449544	TPRN	Q4KMQ1	711 aa		10.19	□□□□□ -0.78
HCG18-238	ENST00000449544	TBC1D22A	Q8WUA7	517 aa		10.19	□□□□□ -0.78
HCG18-238	ENST00000449544	SSH1	Q8WYL5	1049 aa		10.19	□□□□□ -0.78
HCG18-238	ENST00000449544	CAMKK2	Q96RR4	588 aa		10.19	□□□□□ -0.78
HCG18-238	ENST00000449544	TAF5L	O75529	589 aa		10.18	□□□□□ -0.78
HCG18-238	ENST00000449544	ITPK1	Q13572	414 aa		10.18	□□□□□ -0.78
HCG18-238	ENST00000449544	MFSD14B	Q5SR56	506 aa		10.18	□□□□□ -0.78
HCG18-238	ENST00000449544	NAA16	Q6N069	864 aa	Predicted RBP	10.18	□□□□□ -0.78
HCG18-238	ENST00000449544	TMOD4	Q9NZQ9	345 aa		10.18	□□□□□ -0.78
HCG18-238	ENST00000449544	PHLPP1	O60346	1717 aa		10.18	□□□□□ -0.78
HCG18-238	ENST00000449544	ZKSCAN1	P17029	563 aa	Predicted RBP	10.18	□□□□□ -0.78
HCG18-238	ENST00000449544	IL15	P40933	162 aa	Predicted RBP	10.18	□□□□□ -0.78
HCG18-238	ENST00000449544	CNKSR2	Q8WXI2	1034 aa		10.18	□□□□□ -0.78
HCG18-238	ENST00000449544	PTPRC	P08575	1304 aa		10.17	□□□□□ -0.78
HCG18-238	ENST00000449544	XDH	P47989	1333 aa		10.17	□□□□□ -0.78
HCG18-238	ENST00000449544	ZRSR1	Q15695	479 aa	Known RBP	10.17	□□□□□ -0.78
HCG18-238	ENST00000449544	CCDC8	Q9H0W5	538 aa	Predicted RBP	10.17	□□□□□ -0.78
HCG18-238	ENST00000449544	IARS	P41252	1262 aa	Known RBP	10.17	□□□□□ -0.78
HCG18-238	ENST00000449544	WDR66	Q8TBY9	1149 aa		10.17	□□□□□ -0.78
HCG18-238	ENST00000449544	TEKT1	Q969V4	418 aa		10.17	□□□□□ -0.78
HCG18-238	ENST00000449544	EXOC6B	Q9Y2D4	811 aa		10.17	□□□□□ -0.78
HCG18-238	ENST00000449544	CPLX1	O14810	134 aa		10.16	□□□□□ -0.78
HCG18-238	ENST00000449544	USP17L8	P0C7I0	530 aa		10.16	□□□□□ -0.78
HCG18-238	ENST00000449544	TCP10	Q12799	353 aa		10.16	□□□□□ -0.78
HCG18-238	ENST00000449544	CCDC96	Q2M329	555 aa		10.16	□□□□□ -0.78
HCG18-238	ENST00000449544	HUNK	P57058	714 aa		10.16	□□□□□ -0.78
HCG18-238	ENST00000449544	IRX3	P78415	501 aa	Predicted RBP	10.16	□□□□□ -0.78
HCG18-238	ENST00000449544	AOC3	Q16853	763 aa		10.16	□□□□□ -0.78
HCG18-238	ENST00000449544	RNF20	Q5VTR2	975 aa		10.16	□□□□□ -0.78
HCG18-238	ENST00000449544	SMC1B	Q8NDV3	1235 aa		10.16	□□□□□ -0.78
HCG18-238	ENST00000449544	LRRCC1	Q9C099	1032 aa		10.16	□□□□□ -0.78
HCG18-238	ENST00000449544	TMEM131L	A2VDJ0	1609 aa		10.16	□□□□□ -0.78
HCG18-238	ENST00000449544	GRAP	Q13588	217 aa		10.16	□□□□□ -0.78
HCG18-238	ENST00000449544	GRAPL	Q8TC17	118 aa	Predicted RBP	10.16	□□□□□ -0.78
HCG18-238	ENST00000449544	CRNKL1	Q9BZJ0	848 aa	Known RBP	10.16	□□□□□ -0.78
HCG18-238	ENST00000449544	MKRN1	Q9UHC7	482 aa	Known RBP	10.16	□□□□□ -0.78
HCG18-238	ENST00000449544	CLRN2	A0PK11	232 aa		10.16	□□□□□ -0.78
HCG18-238	ENST00000449544	CYP7A1	P22680	504 aa		10.16	□□□□□ -0.78
HCG18-238	ENST00000449544	SCNN1D	P51172	638 aa		10.16	□□□□□ -0.78
HCG18-238	ENST00000449544	CNTROB	Q8N137	903 aa		10.16	□□□□□ -0.78
HCG18-238	ENST00000449544	ZBTB38	Q8NAP3	1195 aa	Predicted RBP	10.16	□□□□□ -0.78
HCG18-238	ENST00000449544	RGS17	Q9UGC6	210 aa	Predicted RBP	10.16	□□□□□ -0.78
HCG18-238	ENST00000449544	GTF3C3	Q9Y5Q9	886 aa		10.16	□□□□□ -0.78
HCG18-238	ENST00000449544	TCP10L2	B9ZVM9	353 aa		10.15	□□□□□ -0.78
HCG18-238	ENST00000449544	IREB2	P48200	963 aa	Known RBP	10.15	□□□□□ -0.78
HCG18-238	ENST00000449544	PRR5L	Q6MZQ0	368 aa		10.15	□□□□□ -0.78
HCG18-238	ENST00000449544	DLC1	Q96QB1	1528 aa		10.15	□□□□□ -0.78
HCG18-238	ENST00000449544	GYS1	P13807	737 aa		10.15	□□□□□ -0.78
HCG18-238	ENST00000449544	ZNF827	Q17R98	1081 aa		10.15	□□□□□ -0.78
HCG18-238	ENST00000449544	SOS1	Q07889	1333 aa	Predicted RBP	10.15	□□□□□ -0.78
HCG18-238	ENST00000449544	ZNF157	P51786	506 aa	Predicted RBP	10.15	□□□□□ -0.79
HCG18-238	ENST00000449544	ALDH1L2	Q3SY69	923 aa		10.15	□□□□□ -0.79
HCG18-238	ENST00000449544	KIF1BP	Q96EK5	621 aa		10.15	□□□□□ -0.79
HCG18-238	ENST00000449544	LNPK	Q9C0E8	428 aa		10.15	□□□□□ -0.79
HCG18-238	ENST00000449544	DENND2A	Q9ULE3	1009 aa		10.15	□□□□□ -0.79
HCG18-238	ENST00000449544	IL16	Q14005	1332 aa		10.15	□□□□□ -0.79
HCG18-238	ENST00000449544	CNTNAP4	Q9C0A0	1308 aa		10.15	□□□□□ -0.79
HCG18-238	ENST00000449544	USP42	Q9H9J4	1324 aa	Known RBP	10.15	□□□□□ -0.79
HCG18-238	ENST00000449544	CHL1	O00533	1208 aa		10.14	□□□□□ -0.79
HCG18-238	ENST00000449544	CTSW	P56202	376 aa		10.14	□□□□□ -0.79
HCG18-238	ENST00000449544	TTF1	Q15361	905 aa	Predicted RBP	10.14	□□□□□ -0.79
HCG18-238	ENST00000449544	TMEM87A	Q8NBN3	555 aa		10.14	□□□□□ -0.79
HCG18-238	ENST00000449544	ANGEL1	Q9UNK9	670 aa	Known RBP	10.14	□□□□□ -0.79
HCG18-238	ENST00000449544	SUSD4	Q5VX71	490 aa		10.14	□□□□□ -0.79
HCG18-238	ENST00000449544	PTF1A	Q7RTS3	328 aa		10.14	□□□□□ -0.79
HCG18-238	ENST00000449544	MPHOSPH6	Q99547	160 aa	Known RBP	10.14	□□□□□ -0.79
HCG18-238	ENST00000449544	NAPB	Q9H115	298 aa		10.14	□□□□□ -0.79
HCG18-238	ENST00000449544	BOLA2	Q9H3K6	86 aa		10.14	□□□□□ -0.79
HCG18-238	ENST00000449544	ZNRF3	Q9ULT6	936 aa		10.14	□□□□□ -0.79
HCG18-238	ENST00000449544	SETBP1	Q9Y6X0	1596 aa		10.14	□□□□□ -0.79
HCG18-238	ENST00000449544	CD163L1	Q9NR16	1453 aa		10.14	□□□□□ -0.79
HCG18-238	ENST00000449544	LRRIQ1	Q96JM4	1722 aa		10.14	□□□□□ -0.79
HCG18-238	ENST00000449544	USP17L3	A6NCW0	530 aa		10.14	□□□□□ -0.79
HCG18-238	ENST00000449544	USP17L4	A6NCW7	530 aa		10.14	□□□□□ -0.79
HCG18-238	ENST00000449544	USP17L1	Q7RTZ2	530 aa		10.14	□□□□□ -0.79
HCG18-238	ENST00000449544	TEX11	Q8IYF3	940 aa		10.14	□□□□□ -0.79
HCG18-238	ENST00000449544	TMEM106C	Q9BVX2	250 aa		10.14	□□□□□ -0.79
HCG18-238	ENST00000449544	PRAMEF22	A3QJZ6	481 aa		10.13	□□□□□ -0.79

Retrieved 100 of 20,778 RNA–protein pairs in 64.9 ms