RNA–Protein interactions for RNA: ENST00000449261.6

BRPF3-206, Transcript of bromodomain and PHD finger containing 3, humanhuman

TSL 5

Gene BRPF3, Length 4,816 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRPF3-206ENST00000449261 CRNKL1Q9BZJ0 848 aaKnown RBP13.23□□□□□ -0.29
BRPF3-206ENST00000449261 CYP7A1P22680 504 aa13.22□□□□□ -0.29
BRPF3-206ENST00000449261 CCDC144CPQ8IYA2 1237 aa13.22□□□□□ -0.29
BRPF3-206ENST00000449261 PHAXQ9H814 394 aaKnown RBP13.22□□□□□ -0.29
BRPF3-206ENST00000449261 SBNO1A3KN83 1393 aa13.22□□□□□ -0.29
BRPF3-206ENST00000449261 NPC1L1Q9UHC9 1359 aa13.22□□□□□ -0.29
BRPF3-206ENST00000449261 USP8P40818 1118 aa13.22□□□□□ -0.29
BRPF3-206ENST00000449261 CEP85Q6P2H3 762 aa13.22□□□□□ -0.29
BRPF3-206ENST00000449261 TPTE2Q6XPS3 522 aa13.22□□□□□ -0.29
BRPF3-206ENST00000449261 RAB11FIP4Q86YS3 637 aa13.22□□□□□ -0.29
BRPF3-206ENST00000449261 DCTPP1Q9H773 170 aa13.22□□□□□ -0.29
BRPF3-206ENST00000449261 GJB2P29033 226 aa13.22□□□□□ -0.29
BRPF3-206ENST00000449261 KIF5BP33176 963 aa13.22□□□□□ -0.29
BRPF3-206ENST00000449261 BRF1Q92994 677 aa13.22□□□□□ -0.29
BRPF3-206ENST00000449261 TFIP11Q9UBB9 837 aaKnown RBP13.22□□□□□ -0.29
BRPF3-206ENST00000449261 RTCBQ9Y3I0 505 aaKnown RBP13.22□□□□□ -0.29
BRPF3-206ENST00000449261 PPFIA3O75145 1194 aa13.21□□□□□ -0.29
BRPF3-206ENST00000449261 HLA-DOAP06340 250 aa13.21□□□□□ -0.29
BRPF3-206ENST00000449261 SLC4A8Q2Y0W8 1093 aa13.21□□□□□ -0.29
BRPF3-206ENST00000449261 CERS3Q8IU89 383 aa13.21□□□□□ -0.29
BRPF3-206ENST00000449261 TNPO1Q92973 898 aaKnown RBP13.21□□□□□ -0.29
BRPF3-206ENST00000449261 FEZ1Q99689 392 aa13.21□□□□□ -0.29
BRPF3-206ENST00000449261 TMEM2Q9UHN6 1383 aa13.21□□□□□ -0.29
BRPF3-206ENST00000449261 NEO1Q92859 1461 aa13.21□□□□□ -0.29
BRPF3-206ENST00000449261 IRS4O14654 1257 aaPredicted RBP13.21□□□□□ -0.29
BRPF3-206ENST00000449261 STX6O43752 255 aa13.21□□□□□ -0.29
BRPF3-206ENST00000449261 MYCNP04198 464 aaPredicted RBP13.21□□□□□ -0.29
BRPF3-206ENST00000449261 MCM5P33992 734 aa13.21□□□□□ -0.29
BRPF3-206ENST00000449261 TNIP1Q15025 636 aa13.21□□□□□ -0.29
BRPF3-206ENST00000449261 METAP2P50579 478 aaKnown RBP eCLIP13.21□□□□□ -0.39e-6■■■■□ 23.9
BRPF3-206ENST00000449261 CDR1P51861 262 aa13.21□□□□□ -0.3
BRPF3-206ENST00000449261 CFAP100Q494V2 611 aa13.21□□□□□ -0.3
BRPF3-206ENST00000449261 ESYT1Q9BSJ8 1104 aa13.21□□□□□ -0.3
BRPF3-206ENST00000449261 RAB34Q9BZG1 259 aa13.21□□□□□ -0.3
BRPF3-206ENST00000449261 ZBTB40Q9NUA8 1239 aa13.21□□□□□ -0.3
BRPF3-206ENST00000449261 STX8Q9UNK0 236 aa13.21□□□□□ -0.3
BRPF3-206ENST00000449261 RBM8AQ9Y5S9 174 aaKnown RBP13.21□□□□□ -0.3
BRPF3-206ENST00000449261 SOS1Q07889 1333 aaPredicted RBP13.2□□□□□ -0.3
BRPF3-206ENST00000449261 TMCO5BA8MYB1 307 aa13.2□□□□□ -0.3
BRPF3-206ENST00000449261 SLC9C2Q5TAH2 1124 aa13.2□□□□□ -0.3
BRPF3-206ENST00000449261 TCEANC2Q96MN5 208 aa13.2□□□□□ -0.3
BRPF3-206ENST00000449261 KAT14Q9H8E8 782 aa13.2□□□□□ -0.3
BRPF3-206ENST00000449261 ZNF790Q6PG37 636 aa13.2□□□□□ -0.3
BRPF3-206ENST00000449261 RGS22Q8NE09 1264 aa13.2□□□□□ -0.3
BRPF3-206ENST00000449261 GDPD2Q9HCC8 539 aa13.2□□□□□ -0.3
BRPF3-206ENST00000449261 VAT1LQ9HCJ6 419 aa13.2□□□□□ -0.3
BRPF3-206ENST00000449261 CABP5Q9NP86 173 aa13.2□□□□□ -0.3
BRPF3-206ENST00000449261 EIF5P55010 431 aaKnown RBP13.2□□□□□ -0.3
BRPF3-206ENST00000449261 KLHL10Q6JEL2 608 aa13.2□□□□□ -0.3
BRPF3-206ENST00000449261 LTKP29376 864 aa13.2□□□□□ -0.3
BRPF3-206ENST00000449261 GSTO1P78417 241 aa13.2□□□□□ -0.3
BRPF3-206ENST00000449261 TTLL12Q14166 644 aaPredicted RBP13.2□□□□□ -0.3
BRPF3-206ENST00000449261 MCMDC2Q4G0Z9 681 aa13.2□□□□□ -0.3
BRPF3-206ENST00000449261 CCDC183Q5T5S1 534 aa13.2□□□□□ -0.3
BRPF3-206ENST00000449261 HELBQ8NG08 1087 aaPredicted RBP13.2□□□□□ -0.3
BRPF3-206ENST00000449261 CUL5Q93034 780 aa13.2□□□□□ -0.3
BRPF3-206ENST00000449261 ANO10Q9NW15 660 aa13.2□□□□□ -0.3
BRPF3-206ENST00000449261 WDR78Q5VTH9 848 aa13.19□□□□□ -0.3
BRPF3-206ENST00000449261 G2E3Q7L622 706 aa13.19□□□□□ -0.3
BRPF3-206ENST00000449261 NYXQ9GZU5 481 aa13.19□□□□□ -0.3
BRPF3-206ENST00000449261 SAMD9Q5K651 1589 aa13.19□□□□□ -0.3
BRPF3-206ENST00000449261 RDXP35241 583 aaKnown RBP13.19□□□□□ -0.3
BRPF3-206ENST00000449261 NAA16Q6N069 864 aaPredicted RBP13.19□□□□□ -0.3
BRPF3-206ENST00000449261 UTP3Q9NQZ2 479 aaKnown RBP eCLIP13.19□□□□□ -0.39e-7■■■■■ 50.6
BRPF3-206ENST00000449261 KLF18A0A0U1RQI7 1052 aa13.19□□□□□ -0.3
BRPF3-206ENST00000449261 PLEKHG3A1L390 1219 aa13.19□□□□□ -0.3
BRPF3-206ENST00000449261 FAM177A1Q8N128 213 aaPredicted RBP13.19□□□□□ -0.3
BRPF3-206ENST00000449261 ZGPATQ8N5A5 531 aaKnown RBP13.19□□□□□ -0.3
BRPF3-206ENST00000449261 FSIP1Q8NA03 581 aa13.19□□□□□ -0.3
BRPF3-206ENST00000449261 SLC26A6Q9BXS9 759 aa13.19□□□□□ -0.3
BRPF3-206ENST00000449261 LRRC2Q9BYS8 371 aa13.19□□□□□ -0.3
BRPF3-206ENST00000449261 TMEM266Q2M3C6 531 aa13.18□□□□□ -0.3
BRPF3-206ENST00000449261 CCDC12Q8WUD4 166 aaPredicted RBP13.18□□□□□ -0.3
BRPF3-206ENST00000449261 TFCP2L1Q9NZI6 479 aa13.18□□□□□ -0.3
BRPF3-206ENST00000449261 SLC4A4Q9Y6R1 1079 aa13.18□□□□□ -0.3
BRPF3-206ENST00000449261 WTAPQ15007 396 aa13.18□□□□□ -0.3
BRPF3-206ENST00000449261 TMX3Q96JJ7 454 aa13.18□□□□□ -0.3
BRPF3-206ENST00000449261 NECAB1Q8N987 351 aa13.18□□□□□ -0.3
BRPF3-206ENST00000449261 PAG1Q9NWQ8 432 aa13.18□□□□□ -0.3
BRPF3-206ENST00000449261 NSFL1CQ9UNZ2 370 aaKnown RBP13.18□□□□□ -0.3
BRPF3-206ENST00000449261 SMC5Q8IY18 1101 aa13.18□□□□□ -0.3
BRPF3-206ENST00000449261 PDCL2Q8N4E4 241 aa13.18□□□□□ -0.3
BRPF3-206ENST00000449261 CDCA7Q9BWT1 371 aaPredicted RBP13.18□□□□□ -0.3
BRPF3-206ENST00000449261 BABAM1Q9NWV8 329 aa13.18□□□□□ -0.3
BRPF3-206ENST00000449261 TTC41PQ6P2S7 1318 aa13.17□□□□□ -0.3
BRPF3-206ENST00000449261 CCDC91Q7Z6B0 441 aa13.17□□□□□ -0.3
BRPF3-206ENST00000449261 GIMAP7Q8NHV1 300 aa13.17□□□□□ -0.3
BRPF3-206ENST00000449261 ZNF830Q96NB3 372 aaPredicted RBP13.17□□□□□ -0.3
BRPF3-206ENST00000449261 LGR6Q9HBX8 967 aa13.17□□□□□ -0.3
BRPF3-206ENST00000449261 CFAP65Q6ZU64 1925 aaKnown RBP13.17□□□□□ -0.3
BRPF3-206ENST00000449261 F8W031 263 aaPredicted RBP13.17□□□□□ -0.3
BRPF3-206ENST00000449261 CHL1O00533 1208 aa13.17□□□□□ -0.3
BRPF3-206ENST00000449261 CKAP2LQ8IYA6 745 aa13.17□□□□□ -0.3
BRPF3-206ENST00000449261 TXLNBQ8N3L3 684 aa13.17□□□□□ -0.3
BRPF3-206ENST00000449261 CNNM3Q8NE01 707 aa13.17□□□□□ -0.3
BRPF3-206ENST00000449261 ESR2Q92731 530 aa13.17□□□□□ -0.3
BRPF3-206ENST00000449261 SLAIN2Q9P270 581 aa13.17□□□□□ -0.3
BRPF3-206ENST00000449261 WDHD1O75717 1129 aaPredicted RBP13.17□□□□□ -0.3
BRPF3-206ENST00000449261 LRCH2Q5VUJ6 765 aa13.17□□□□□ -0.3
BRPF3-206ENST00000449261 KRT23Q9C075 422 aa13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms