RNA–Protein interactions for RNA: ENST00000449116.6

SHANK2-210, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

TSL 1 (best) BASIC

Gene SHANK2, Length 939 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-210ENST00000449116 SPON1Q9HCB6 807 aa18.26■□□□□ 0.51
SHANK2-210ENST00000449116 MYH3P11055 1940 aa18.25■□□□□ 0.51
SHANK2-210ENST00000449116 C10orf71Q711Q0 1435 aa18.25■□□□□ 0.51
SHANK2-210ENST00000449116 PNMA6EA0A0J9YXQ4 647 aa18.25■□□□□ 0.51
SHANK2-210ENST00000449116 KLRG2A4D1S0 409 aaPredicted RBP18.25■□□□□ 0.51
SHANK2-210ENST00000449116 HMMRO75330 724 aa18.25■□□□□ 0.51
SHANK2-210ENST00000449116 PDE6BP35913 854 aa18.25■□□□□ 0.51
SHANK2-210ENST00000449116 SIRT2Q8IXJ6 389 aa18.25■□□□□ 0.51
SHANK2-210ENST00000449116 CCDC85AQ96PX6 553 aaPredicted RBP18.25■□□□□ 0.51
SHANK2-210ENST00000449116 POLA2Q14181 598 aa18.24■□□□□ 0.51
SHANK2-210ENST00000449116 FAM161AQ3B820 660 aa18.24■□□□□ 0.51
SHANK2-210ENST00000449116 CRY2Q49AN0 593 aa18.24■□□□□ 0.51
SHANK2-210ENST00000449116 SSH3Q8TE77 659 aa18.24■□□□□ 0.51
SHANK2-210ENST00000449116 GREM2Q9H772 168 aa18.24■□□□□ 0.51
SHANK2-210ENST00000449116 RTL9Q8NET4 1388 aa18.24■□□□□ 0.51
SHANK2-210ENST00000449116 ANKRD31Q8N7Z5 1873 aa18.23■□□□□ 0.51
SHANK2-210ENST00000449116 IFIT5Q13325 482 aaKnown RBP18.23■□□□□ 0.51
SHANK2-210ENST00000449116 HDAC1Q13547 482 aaPredicted RBP18.23■□□□□ 0.51
SHANK2-210ENST00000449116 CCDC57Q2TAC2 916 aa18.23■□□□□ 0.51
SHANK2-210ENST00000449116 PPP4R2Q9NY27 417 aa18.23■□□□□ 0.51
SHANK2-210ENST00000449116 GTF3C3Q9Y5Q9 886 aa18.23■□□□□ 0.51
SHANK2-210ENST00000449116 ANKRD18BA2A2Z9 1011 aa18.22■□□□□ 0.51
SHANK2-210ENST00000449116 ITGA6P23229 1130 aa18.22■□□□□ 0.51
SHANK2-210ENST00000449116 RWDD1Q9H446 243 aaPredicted RBP18.22■□□□□ 0.51
SHANK2-210ENST00000449116 PDZRN3Q9UPQ7 1066 aa18.22■□□□□ 0.51
SHANK2-210ENST00000449116 RFX5P48382 616 aaPredicted RBP18.21■□□□□ 0.51
SHANK2-210ENST00000449116 DDX46Q7L014 1031 aaKnown RBP18.21■□□□□ 0.51
SHANK2-210ENST00000449116 RPGRQ92834 1020 aaKnown RBP18.21■□□□□ 0.51
SHANK2-210ENST00000449116 C2CD5Q86YS7 1000 aa18.2■□□□□ 0.5
SHANK2-210ENST00000449116 RBM17Q96I25 401 aaKnown RBP18.2■□□□□ 0.5
SHANK2-210ENST00000449116 CCDC136Q96JN2 1154 aa18.2■□□□□ 0.5
SHANK2-210ENST00000449116 CDC5LQ99459 802 aaKnown RBP18.2■□□□□ 0.5
SHANK2-210ENST00000449116 SEC31BQ9NQW1 1179 aa18.2■□□□□ 0.5
SHANK2-210ENST00000449116 H0YIN7 160 aa18.19■□□□□ 0.5
SHANK2-210ENST00000449116 SRGNP10124 158 aa18.19■□□□□ 0.5
SHANK2-210ENST00000449116 NPR1P16066 1061 aa18.19■□□□□ 0.5
SHANK2-210ENST00000449116 HOXA10P31260 410 aaPredicted RBP18.19■□□□□ 0.5
SHANK2-210ENST00000449116 PTPN12Q05209 780 aaKnown RBP18.19■□□□□ 0.5
SHANK2-210ENST00000449116 TAF7LQ5H9L4 462 aa18.19■□□□□ 0.5
SHANK2-210ENST00000449116 COPRSQ9NQ92 184 aa18.19■□□□□ 0.5
SHANK2-210ENST00000449116 KIF13BQ9NQT8 1826 aa18.19■□□□□ 0.5
SHANK2-210ENST00000449116 IGHDP01880 384 aa18.18■□□□□ 0.5
SHANK2-210ENST00000449116 KLHDC4Q8TBB5 520 aa18.18■□□□□ 0.5
SHANK2-210ENST00000449116 MASTLQ96GX5 879 aa18.18■□□□□ 0.5
SHANK2-210ENST00000449116 PA2G4Q9UQ80 394 aaKnown RBP18.18■□□□□ 0.5
SHANK2-210ENST00000449116 CD2APQ9Y5K6 639 aa18.18■□□□□ 0.5
SHANK2-210ENST00000449116 IGHMBP2P38935 993 aaKnown RBP18.17■□□□□ 0.5
SHANK2-210ENST00000449116 TGFB2P61812 414 aa18.17■□□□□ 0.5
SHANK2-210ENST00000449116 GRAPQ13588 217 aa18.17■□□□□ 0.5
SHANK2-210ENST00000449116 B4GALNT3Q6L9W6 998 aa18.17■□□□□ 0.5
SHANK2-210ENST00000449116 GRAPLQ8TC17 118 aaPredicted RBP18.17■□□□□ 0.5
SHANK2-210ENST00000449116 ZNF594Q96JF6 807 aaPredicted RBP18.17■□□□□ 0.5
SHANK2-210ENST00000449116 CRAMP1Q96RY5 1269 aa18.17■□□□□ 0.5
SHANK2-210ENST00000449116 DCTPP1Q9H773 170 aa18.17■□□□□ 0.5
SHANK2-210ENST00000449116 NOP58Q9Y2X3 529 aaKnown RBP18.17■□□□□ 0.5
SHANK2-210ENST00000449116 COL11A2P13942 1736 aaPredicted RBP18.17■□□□□ 0.5
SHANK2-210ENST00000449116 SRCAPQ6ZRS2 3230 aa18.17■□□□□ 0.5
SHANK2-210ENST00000449116 SURF6O75683 361 aaKnown RBP18.16■□□□□ 0.5
SHANK2-210ENST00000449116 CHRNA5P30532 468 aa18.16■□□□□ 0.5
SHANK2-210ENST00000449116 STYK1Q6J9G0 422 aa18.16■□□□□ 0.5
SHANK2-210ENST00000449116 ANKRD18AQ8IVF6 992 aa18.16■□□□□ 0.5
SHANK2-210ENST00000449116 CELF1Q92879 486 aaKnown RBP18.16■□□□□ 0.5
SHANK2-210ENST00000449116 PPP1R1BQ9UD71 204 aaPredicted RBP18.16■□□□□ 0.5
SHANK2-210ENST00000449116 FBXO3Q9UK99 471 aa18.16■□□□□ 0.5
SHANK2-210ENST00000449116 LRP5O75197 1615 aa18.16■□□□□ 0.5
SHANK2-210ENST00000449116 ALDH1B1P30837 517 aa18.15■□□□□ 0.5
SHANK2-210ENST00000449116 RPS8P62241 208 aaKnown RBP18.15■□□□□ 0.5
SHANK2-210ENST00000449116 G3BP1Q13283 466 aaKnown RBP eCLIP18.15■□□□□ 0.5
SHANK2-210ENST00000449116 HSP90AB4PQ58FF6 505 aa18.15■□□□□ 0.5
SHANK2-210ENST00000449116 KLHL34Q8N239 644 aa18.15■□□□□ 0.5
SHANK2-210ENST00000449116 ZNF622Q969S3 477 aaKnown RBP eCLIP18.15■□□□□ 0.5
SHANK2-210ENST00000449116 GCC1Q96CN9 775 aa18.15■□□□□ 0.5
SHANK2-210ENST00000449116 MPHOSPH8Q99549 860 aa18.15■□□□□ 0.5
SHANK2-210ENST00000449116 SIL1Q9H173 461 aa18.15■□□□□ 0.5
SHANK2-210ENST00000449116 EXOC6BQ9Y2D4 811 aa18.15■□□□□ 0.5
SHANK2-210ENST00000449116 EYA2O00167 538 aa18.14■□□□□ 0.49
SHANK2-210ENST00000449116 CIAO1O76071 339 aa18.14■□□□□ 0.49
SHANK2-210ENST00000449116 DPEP1P16444 411 aa18.14■□□□□ 0.49
SHANK2-210ENST00000449116 LDHAL6AQ6ZMR3 332 aa18.14■□□□□ 0.49
SHANK2-210ENST00000449116 COL4A1P02462 1669 aa18.14■□□□□ 0.49
SHANK2-210ENST00000449116 RAB11FIP3O75154 756 aa18.13■□□□□ 0.49
SHANK2-210ENST00000449116 BBOX1O75936 387 aa18.13■□□□□ 0.49
SHANK2-210ENST00000449116 IL15P40933 162 aaPredicted RBP18.13■□□□□ 0.49
SHANK2-210ENST00000449116 OS9Q13438 667 aaPredicted RBP18.13■□□□□ 0.49
SHANK2-210ENST00000449116 LRRC24Q50LG9 513 aa18.13■□□□□ 0.49
SHANK2-210ENST00000449116 CENPQQ7L2Z9 268 aaPredicted RBP18.13■□□□□ 0.49
SHANK2-210ENST00000449116 SMC5Q8IY18 1101 aa18.13■□□□□ 0.49
SHANK2-210ENST00000449116 CNKSR1Q969H4 720 aa18.13■□□□□ 0.49
SHANK2-210ENST00000449116 PUS3Q9BZE2 481 aaKnown RBP18.13■□□□□ 0.49
SHANK2-210ENST00000449116 CNNM1Q9NRU3 951 aa18.13■□□□□ 0.49
SHANK2-210ENST00000449116 BSDC1Q9NW68 430 aaPredicted RBP18.13■□□□□ 0.49
SHANK2-210ENST00000449116 KDM2BQ8NHM5 1336 aa18.13■□□□□ 0.49
SHANK2-210ENST00000449116 A0A0G2JLW4 131 aa18.12■□□□□ 0.49
SHANK2-210ENST00000449116 ATG9AQ7Z3C6 839 aa18.12■□□□□ 0.49
SHANK2-210ENST00000449116 TMC4Q7Z404 712 aa18.12■□□□□ 0.49
SHANK2-210ENST00000449116 ERC1Q8IUD2 1116 aa18.12■□□□□ 0.49
SHANK2-210ENST00000449116 KIAA1551Q9HCM1 1747 aa18.12■□□□□ 0.49
SHANK2-210ENST00000449116 DLEC1Q9Y238 1755 aa18.12■□□□□ 0.49
SHANK2-210ENST00000449116 KCNA3P22001 575 aa18.11■□□□□ 0.49
SHANK2-210ENST00000449116 RIPOR2Q9Y4F9 1068 aa18.11■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms