RNA–Protein interactions for RNA: ENST00000448056.1

AC004540.1-206, humanhuman

TSL 3

Gene AC004540.1, Length 567 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC004540.1-206ENST00000448056 FAM177BA6PVY3 158 aa9.54□□□□□ -0.88
AC004540.1-206ENST00000448056 SERPINB2P05120 415 aa9.54□□□□□ -0.88
AC004540.1-206ENST00000448056 POLD1P28340 1107 aa9.54□□□□□ -0.88
AC004540.1-206ENST00000448056 PTGER2P43116 358 aa9.54□□□□□ -0.88
AC004540.1-206ENST00000448056 ATN1P54259 1190 aaPredicted RBP9.54□□□□□ -0.88
AC004540.1-206ENST00000448056 RRP1P56182 461 aaKnown RBP9.54□□□□□ -0.88
AC004540.1-206ENST00000448056 C20orf194Q5TEA3 1177 aa9.54□□□□□ -0.88
AC004540.1-206ENST00000448056 NBPF5PQ86XG9 351 aaPredicted RBP9.54□□□□□ -0.88
AC004540.1-206ENST00000448056 FTSJ3Q8IY81 847 aaKnown RBP9.54□□□□□ -0.88
AC004540.1-206ENST00000448056 PANK1Q8TE04 598 aa9.54□□□□□ -0.88
AC004540.1-206ENST00000448056 MFRPQ9BY79 579 aa9.54□□□□□ -0.88
AC004540.1-206ENST00000448056 TRMT112Q9UI30 125 aaKnown RBP9.54□□□□□ -0.88
AC004540.1-206ENST00000448056 C4AP0C0L4 1744 aa9.53□□□□□ -0.88
AC004540.1-206ENST00000448056 CARMIL3Q8ND23 1372 aa9.53□□□□□ -0.88
AC004540.1-206ENST00000448056 H7C1W4 665 aa9.53□□□□□ -0.88
AC004540.1-206ENST00000448056 SYNE4Q8N205 404 aa9.53□□□□□ -0.88
AC004540.1-206ENST00000448056 TMEM57Q8N5G2 664 aa9.53□□□□□ -0.88
AC004540.1-206ENST00000448056 ZBTB38Q8NAP3 1195 aaPredicted RBP9.53□□□□□ -0.88
AC004540.1-206ENST00000448056 FAM89AQ96GI7 184 aa9.53□□□□□ -0.88
AC004540.1-206ENST00000448056 NYXQ9GZU5 481 aa9.53□□□□□ -0.88
AC004540.1-206ENST00000448056 USP44Q9H0E7 712 aa9.53□□□□□ -0.88
AC004540.1-206ENST00000448056 RYDENQ9NUL5 291 aaKnown RBP9.53□□□□□ -0.88
AC004540.1-206ENST00000448056 CASZ1Q86V15 1759 aa9.52□□□□□ -0.88
AC004540.1-206ENST00000448056 NTSR2O95665 410 aa9.52□□□□□ -0.89
AC004540.1-206ENST00000448056 PCCAP05165 728 aaPredicted RBP9.52□□□□□ -0.89
AC004540.1-206ENST00000448056 GTF2E1P29083 439 aaPredicted RBP9.52□□□□□ -0.89
AC004540.1-206ENST00000448056 ERFEQ4G0M1 354 aa9.52□□□□□ -0.89
AC004540.1-206ENST00000448056 SLC10A5Q5PT55 438 aa9.52□□□□□ -0.89
AC004540.1-206ENST00000448056 NUTM1Q86Y26 1132 aa9.52□□□□□ -0.89
AC004540.1-206ENST00000448056 JARID2Q92833 1246 aaPredicted RBP9.52□□□□□ -0.89
AC004540.1-206ENST00000448056 DCBLD2Q96PD2 775 aa9.52□□□□□ -0.89
AC004540.1-206ENST00000448056 C9orf78Q9NZ63 289 aaPredicted RBP9.52□□□□□ -0.89
AC004540.1-206ENST00000448056 SCN7AQ01118 1682 aa9.51□□□□□ -0.89
AC004540.1-206ENST00000448056 IBTKQ9P2D0 1353 aaPredicted RBP9.51□□□□□ -0.89
AC004540.1-206ENST00000448056 SRCAPQ6ZRS2 3230 aa9.51□□□□□ -0.89
AC004540.1-206ENST00000448056 BCORQ6W2J9 1755 aa9.51□□□□□ -0.89
AC004540.1-206ENST00000448056 GRM8O00222 908 aa9.51□□□□□ -0.89
AC004540.1-206ENST00000448056 ZBTB7BO15156 539 aaPredicted RBP9.51□□□□□ -0.89
AC004540.1-206ENST00000448056 NPHP1O15259 732 aa9.51□□□□□ -0.89
AC004540.1-206ENST00000448056 NBPF7P0C2Y1 421 aaPredicted RBP9.51□□□□□ -0.89
AC004540.1-206ENST00000448056 CASP7P55210 303 aa9.51□□□□□ -0.89
AC004540.1-206ENST00000448056 RTL5Q5HYW3 569 aaPredicted RBP9.51□□□□□ -0.89
AC004540.1-206ENST00000448056 PRR5LQ6MZQ0 368 aa9.51□□□□□ -0.89
AC004540.1-206ENST00000448056 ITPRIPQ8IWB1 547 aa9.51□□□□□ -0.89
AC004540.1-206ENST00000448056 CCDC24Q8N4L8 307 aa9.51□□□□□ -0.89
AC004540.1-206ENST00000448056 CNBD1Q8NA66 436 aa9.51□□□□□ -0.89
AC004540.1-206ENST00000448056 FBXO22Q8NEZ5 403 aa9.51□□□□□ -0.89
AC004540.1-206ENST00000448056 COG6Q9Y2V7 657 aa9.51□□□□□ -0.89
AC004540.1-206ENST00000448056 NUP98P52948 1817 aa9.51□□□□□ -0.89
AC004540.1-206ENST00000448056 UTYO14607 1347 aa9.51□□□□□ -0.89
AC004540.1-206ENST00000448056 SH3TC1Q8TE82 1336 aa9.51□□□□□ -0.89
AC004540.1-206ENST00000448056 IRS4O14654 1257 aaPredicted RBP9.5□□□□□ -0.89
AC004540.1-206ENST00000448056 HCLS1P14317 486 aaPredicted RBP9.5□□□□□ -0.89
AC004540.1-206ENST00000448056 ST5P78524 1137 aa9.5□□□□□ -0.89
AC004540.1-206ENST00000448056 MKRN3Q13064 507 aaKnown RBP9.5□□□□□ -0.89
AC004540.1-206ENST00000448056 MVPQ14764 893 aaKnown RBP9.5□□□□□ -0.89
AC004540.1-206ENST00000448056 UBE3BQ7Z3V4 1068 aa9.5□□□□□ -0.89
AC004540.1-206ENST00000448056 BRIP1Q9BX63 1249 aa9.5□□□□□ -0.89
AC004540.1-206ENST00000448056 PXDNLA1KZ92 1463 aa9.5□□□□□ -0.89
AC004540.1-206ENST00000448056 ARFGEF2Q9Y6D5 1785 aa9.5□□□□□ -0.89
AC004540.1-206ENST00000448056 GNAI3P08754 354 aa9.49□□□□□ -0.89
AC004540.1-206ENST00000448056 POTEIP0CG38 1075 aa9.49□□□□□ -0.89
AC004540.1-206ENST00000448056 HSP90B1P14625 803 aaKnown RBP9.49□□□□□ -0.89
AC004540.1-206ENST00000448056 PELP1Q8IZL8 1130 aaKnown RBP9.49□□□□□ -0.89
AC004540.1-206ENST00000448056 MEIS3Q99687 375 aa9.49□□□□□ -0.89
AC004540.1-206ENST00000448056 DDX19BQ9UMR2 479 aa9.49□□□□□ -0.89
AC004540.1-206ENST00000448056 CDHR2Q9BYE9 1310 aa9.49□□□□□ -0.89
AC004540.1-206ENST00000448056 KLRG2A4D1S0 409 aaPredicted RBP9.48□□□□□ -0.89
AC004540.1-206ENST00000448056 PDE8AO60658 829 aa9.48□□□□□ -0.89
AC004540.1-206ENST00000448056 UBTFL1P0CB47 393 aaPredicted RBP9.48□□□□□ -0.89
AC004540.1-206ENST00000448056 PDE6BP35913 854 aa9.48□□□□□ -0.89
AC004540.1-206ENST00000448056 FOXO4P98177 505 aa9.48□□□□□ -0.89
AC004540.1-206ENST00000448056 KAZALD1Q96I82 304 aa9.48□□□□□ -0.89
AC004540.1-206ENST00000448056 NLRP3Q96P20 1036 aa9.48□□□□□ -0.89
AC004540.1-206ENST00000448056 PLA2G12BQ9BX93 195 aa9.48□□□□□ -0.89
AC004540.1-206ENST00000448056 HDAC5Q9UQL6 1122 aa9.48□□□□□ -0.89
AC004540.1-206ENST00000448056 CD2APQ9Y5K6 639 aa9.48□□□□□ -0.89
AC004540.1-206ENST00000448056 CSF1RP07333 972 aa9.47□□□□□ -0.89
AC004540.1-206ENST00000448056 SF3B3Q15393 1217 aaKnown RBP9.47□□□□□ -0.89
AC004540.1-206ENST00000448056 EPHA10Q5JZY3 1008 aa9.47□□□□□ -0.89
AC004540.1-206ENST00000448056 C3orf67Q6ZVT6 689 aa9.47□□□□□ -0.89
AC004540.1-206ENST00000448056 SUCLG2Q96I99 432 aa9.47□□□□□ -0.89
AC004540.1-206ENST00000448056 CRBNQ96SW2 442 aa9.47□□□□□ -0.89
AC004540.1-206ENST00000448056 CHMP4BQ9H444 224 aaKnown RBP9.47□□□□□ -0.89
AC004540.1-206ENST00000448056 ZBTB40Q9NUA8 1239 aa9.47□□□□□ -0.89
AC004540.1-206ENST00000448056 PPP1R1BQ9UD71 204 aaPredicted RBP9.47□□□□□ -0.89
AC004540.1-206ENST00000448056 COL24A1Q17RW2 1714 aa9.47□□□□□ -0.89
AC004540.1-206ENST00000448056 ABCC12Q96J65 1359 aa9.47□□□□□ -0.89
AC004540.1-206ENST00000448056 H0YIN7 160 aa9.46□□□□□ -0.9
AC004540.1-206ENST00000448056 GNAI2P04899 355 aa9.46□□□□□ -0.9
AC004540.1-206ENST00000448056 TGFB2P61812 414 aa9.46□□□□□ -0.9
AC004540.1-206ENST00000448056 CRY2Q49AN0 593 aa9.46□□□□□ -0.9
AC004540.1-206ENST00000448056 IER5LQ5T953 404 aa9.46□□□□□ -0.9
AC004540.1-206ENST00000448056 TTLL11Q8NHH1 800 aa9.46□□□□□ -0.9
AC004540.1-206ENST00000448056 MS4A4AQ96JQ5 239 aa9.46□□□□□ -0.9
AC004540.1-206ENST00000448056 BICC1Q9H694 974 aaKnown RBP9.46□□□□□ -0.9
AC004540.1-206ENST00000448056 PDZRN3Q9UPQ7 1066 aa9.46□□□□□ -0.9
AC004540.1-206ENST00000448056 LRRFIP2Q9Y608 721 aaKnown RBP9.46□□□□□ -0.9
AC004540.1-206ENST00000448056 NRXN2Q9P2S2 1712 aa9.45□□□□□ -0.9
AC004540.1-206ENST00000448056 ANKRD36CQ5JPF3 1778 aa9.45□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms