RNA–Protein interactions for RNA: ENST00000445654.2

SHANK2-209, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

TSL 3

Gene SHANK2, Length 522 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-209ENST00000445654 UBN2Q6ZU65 1347 aa18.52■□□□□ 0.56
SHANK2-209ENST00000445654 ZNF157P51786 506 aaPredicted RBP18.52■□□□□ 0.56
SHANK2-209ENST00000445654 HIRAP54198 1017 aaPredicted RBP18.52■□□□□ 0.56
SHANK2-209ENST00000445654 KIF23Q02241 960 aaPredicted RBP18.52■□□□□ 0.56
SHANK2-209ENST00000445654 PKN2Q16513 984 aaKnown RBP18.52■□□□□ 0.56
SHANK2-209ENST00000445654 GIGYF2Q6Y7W6 1299 aaKnown RBP18.52■□□□□ 0.56
SHANK2-209ENST00000445654 ZNF34Q8IZ26 560 aa18.52■□□□□ 0.56
SHANK2-209ENST00000445654 TRPM4Q8TD43 1214 aa18.52■□□□□ 0.56
SHANK2-209ENST00000445654 FAM155AB1AL88 458 aaPredicted RBP18.51■□□□□ 0.55
SHANK2-209ENST00000445654 TRPA1O75762 1119 aa18.51■□□□□ 0.55
SHANK2-209ENST00000445654 RAD17O75943 681 aa18.51■□□□□ 0.55
SHANK2-209ENST00000445654 KRT26Q7Z3Y9 468 aa18.51■□□□□ 0.55
SHANK2-209ENST00000445654 TMC4Q7Z404 712 aa18.51■□□□□ 0.55
SHANK2-209ENST00000445654 ZIC5Q96T25 663 aa18.51■□□□□ 0.55
SHANK2-209ENST00000445654 RNF186Q9NXI6 227 aa18.51■□□□□ 0.55
SHANK2-209ENST00000445654 RRP7AQ9Y3A4 280 aaKnown RBP18.51■□□□□ 0.55
SHANK2-209ENST00000445654 ABCC4O15439 1325 aa18.5■□□□□ 0.55
SHANK2-209ENST00000445654 ERBB4Q15303 1308 aa18.5■□□□□ 0.55
SHANK2-209ENST00000445654 TRIM26Q12899 539 aaPredicted RBP18.5■□□□□ 0.55
SHANK2-209ENST00000445654 SLC10A5Q5PT55 438 aa18.5■□□□□ 0.55
SHANK2-209ENST00000445654 MICALL2Q8IY33 904 aa18.5■□□□□ 0.55
SHANK2-209ENST00000445654 DCPSQ96C86 337 aaKnown RBP18.5■□□□□ 0.55
SHANK2-209ENST00000445654 ZBTB3Q9H5J0 574 aa18.5■□□□□ 0.55
SHANK2-209ENST00000445654 NEFMP07197 916 aa18.49■□□□□ 0.55
SHANK2-209ENST00000445654 RPS12P25398 132 aaKnown RBP18.49■□□□□ 0.55
SHANK2-209ENST00000445654 TTLL7Q6ZT98 887 aa18.49■□□□□ 0.55
SHANK2-209ENST00000445654 UTP14AQ9BVJ6 771 aaKnown RBP18.49■□□□□ 0.55
SHANK2-209ENST00000445654 DDX46Q7L014 1031 aaKnown RBP18.48■□□□□ 0.55
SHANK2-209ENST00000445654 SLC10A3P09131 477 aa18.47■□□□□ 0.55
SHANK2-209ENST00000445654 U2AF1L5P0DN76 240 aaPredicted RBP18.47■□□□□ 0.55
SHANK2-209ENST00000445654 MYL6BP14649 208 aa18.47■□□□□ 0.55
SHANK2-209ENST00000445654 U2AF1Q01081 240 aaKnown RBP eCLIP18.47■□□□□ 0.55
SHANK2-209ENST00000445654 ANKRD36CQ5JPF3 1778 aa18.46■□□□□ 0.55
SHANK2-209ENST00000445654 DCTN1Q14203 1278 aa18.46■□□□□ 0.55
SHANK2-209ENST00000445654 HPS5Q9UPZ3 1129 aa18.46■□□□□ 0.55
SHANK2-209ENST00000445654 GRAPQ13588 217 aa18.45■□□□□ 0.54
SHANK2-209ENST00000445654 HSP90AB3PQ58FF7 597 aa18.45■□□□□ 0.54
SHANK2-209ENST00000445654 C3orf67Q6ZVT6 689 aa18.45■□□□□ 0.54
SHANK2-209ENST00000445654 SULF1Q8IWU6 871 aa18.45■□□□□ 0.54
SHANK2-209ENST00000445654 GRAPLQ8TC17 118 aaPredicted RBP18.45■□□□□ 0.54
SHANK2-209ENST00000445654 CSRNP1Q96S65 589 aa18.45■□□□□ 0.54
SHANK2-209ENST00000445654 HDAC9Q9UKV0 1011 aa18.45■□□□□ 0.54
SHANK2-209ENST00000445654 KDM3BQ7LBC6 1761 aa18.45■□□□□ 0.54
SHANK2-209ENST00000445654 EIF4A1P60842 406 aaKnown RBP18.43■□□□□ 0.54
SHANK2-209ENST00000445654 FKBP1BP68106 108 aa18.43■□□□□ 0.54
SHANK2-209ENST00000445654 WASHC4Q2M389 1173 aa18.43■□□□□ 0.54
SHANK2-209ENST00000445654 TBC1D10BQ4KMP7 808 aaPredicted RBP18.43■□□□□ 0.54
SHANK2-209ENST00000445654 SAMD7Q7Z3H4 446 aa18.43■□□□□ 0.54
SHANK2-209ENST00000445654 DDX60Q8IY21 1712 aaKnown RBP18.43■□□□□ 0.54
SHANK2-209ENST00000445654 YDJCA8MPS7 323 aa18.42■□□□□ 0.54
SHANK2-209ENST00000445654 SLC51AQ86UW1 340 aa18.42■□□□□ 0.54
SHANK2-209ENST00000445654 MIS18AQ9NYP9 233 aa18.42■□□□□ 0.54
SHANK2-209ENST00000445654 LAMB2P55268 1798 aa18.41■□□□□ 0.54
SHANK2-209ENST00000445654 PSMD14O00487 310 aa18.41■□□□□ 0.54
SHANK2-209ENST00000445654 EYA3Q99504 573 aa18.41■□□□□ 0.54
SHANK2-209ENST00000445654 ZBTB12Q9Y330 459 aaPredicted RBP18.41■□□□□ 0.54
SHANK2-209ENST00000445654 SHTN1A0MZ66 631 aa18.4■□□□□ 0.54
SHANK2-209ENST00000445654 ADM5C9JUS6 153 aa18.4■□□□□ 0.54
SHANK2-209ENST00000445654 NOM1Q5C9Z4 860 aaKnown RBP18.4■□□□□ 0.54
SHANK2-209ENST00000445654 LRRC37AA6NMS7 1700 aa18.4■□□□□ 0.54
SHANK2-209ENST00000445654 POLR2AP24928 1970 aaKnown RBP18.39■□□□□ 0.53
SHANK2-209ENST00000445654 CNGB1Q14028 1251 aaPredicted RBP18.39■□□□□ 0.53
SHANK2-209ENST00000445654 KIF4BQ2VIQ3 1234 aa18.39■□□□□ 0.53
SHANK2-209ENST00000445654 RBM26Q5T8P6 1007 aaKnown RBP18.39■□□□□ 0.53
SHANK2-209ENST00000445654 SH3TC1Q8TE82 1336 aa18.39■□□□□ 0.53
SHANK2-209ENST00000445654 FBXO46Q6PJ61 603 aaPredicted RBP18.38■□□□□ 0.53
SHANK2-209ENST00000445654 RASAL3Q86YV0 1011 aa18.38■□□□□ 0.53
SHANK2-209ENST00000445654 CDCA5Q96FF9 252 aa18.38■□□□□ 0.53
SHANK2-209ENST00000445654 GGA3Q9NZ52 723 aa18.38■□□□□ 0.53
SHANK2-209ENST00000445654 TRMT112Q9UI30 125 aaKnown RBP18.38■□□□□ 0.53
SHANK2-209ENST00000445654 DUOX1Q9NRD9 1551 aa18.38■□□□□ 0.53
SHANK2-209ENST00000445654 NECTIN2Q92692 538 aa18.37■□□□□ 0.53
SHANK2-209ENST00000445654 PCGF6Q9BYE7 350 aa18.37■□□□□ 0.53
SHANK2-209ENST00000445654 DBNDD1Q9H9R9 158 aa18.37■□□□□ 0.53
SHANK2-209ENST00000445654 NSFL1CQ9UNZ2 370 aaKnown RBP18.37■□□□□ 0.53
SHANK2-209ENST00000445654 PAPPA2Q9BXP8 1791 aa18.37■□□□□ 0.53
SHANK2-209ENST00000445654 C6orf229H3BNL8 230 aa18.36■□□□□ 0.53
SHANK2-209ENST00000445654 ECE2O60344 883 aa18.36■□□□□ 0.53
SHANK2-209ENST00000445654 HCLS1P14317 486 aaPredicted RBP18.36■□□□□ 0.53
SHANK2-209ENST00000445654 DLK2Q6UY11 383 aa18.36■□□□□ 0.53
SHANK2-209ENST00000445654 NLRP10Q86W26 655 aa18.36■□□□□ 0.53
SHANK2-209ENST00000445654 ZNF296Q8WUU4 475 aaPredicted RBP18.36■□□□□ 0.53
SHANK2-209ENST00000445654 PITPNM2Q9BZ72 1349 aa18.34■□□□□ 0.53
SHANK2-209ENST00000445654 DLG5Q8TDM6 1919 aa18.34■□□□□ 0.53
SHANK2-209ENST00000445654 G3V3G9 751 aa18.34■□□□□ 0.53
SHANK2-209ENST00000445654 RIMBP2O15034 1052 aa18.34■□□□□ 0.53
SHANK2-209ENST00000445654 EGFRP00533 1210 aa18.34■□□□□ 0.53
SHANK2-209ENST00000445654 VIL1P09327 827 aaKnown RBP18.34■□□□□ 0.53
SHANK2-209ENST00000445654 DCAF8Q5TAQ9 597 aa18.34■□□□□ 0.53
SHANK2-209ENST00000445654 ZC3H12CQ9C0D7 883 aaKnown RBP18.34■□□□□ 0.53
SHANK2-209ENST00000445654 PNNQ9H307 717 aaKnown RBP18.34■□□□□ 0.53
SHANK2-209ENST00000445654 ZNF609O15014 1411 aa18.33■□□□□ 0.53
SHANK2-209ENST00000445654 TCIRG1Q13488 830 aa18.33■□□□□ 0.52
SHANK2-209ENST00000445654 HABP4Q5JVS0 413 aaKnown RBP18.33■□□□□ 0.52
SHANK2-209ENST00000445654 AGBL3Q8NEM8 1001 aa18.33■□□□□ 0.52
SHANK2-209ENST00000445654 SREBF2Q12772 1141 aa18.32■□□□□ 0.52
SHANK2-209ENST00000445654 INTS3Q68E01 1043 aaKnown RBP18.32■□□□□ 0.52
SHANK2-209ENST00000445654 LRP10Q7Z4F1 713 aa18.32■□□□□ 0.52
SHANK2-209ENST00000445654 GPR25O00155 361 aa18.31■□□□□ 0.52
SHANK2-209ENST00000445654 TBC1D8O95759 1140 aa18.31■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms