RNA–Protein interactions for RNA: ENST00000444502.5

TOP3B-210, Transcript of DNA topoisomerase III beta, humanhuman

TSL 2

Gene TOP3B, Length 4,163 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3B-210ENST00000444502 SLC5A1P13866 664 aa12.47□□□□□ -0.41
TOP3B-210ENST00000444502 CCDC82Q8N4S0 544 aa12.47□□□□□ -0.41
TOP3B-210ENST00000444502 AXIN2Q9Y2T1 843 aa12.47□□□□□ -0.41
TOP3B-210ENST00000444502 MYO3AQ8NEV4 1616 aa12.47□□□□□ -0.41
TOP3B-210ENST00000444502 CD163L1Q9NR16 1453 aa12.47□□□□□ -0.41
TOP3B-210ENST00000444502 MYOM1P52179 1685 aa12.47□□□□□ -0.41
TOP3B-210ENST00000444502 PES1O00541 588 aaKnown RBP12.47□□□□□ -0.41
TOP3B-210ENST00000444502 IRS4O14654 1257 aaPredicted RBP12.47□□□□□ -0.41
TOP3B-210ENST00000444502 GIGYF1O75420 1035 aaPredicted RBP12.47□□□□□ -0.41
TOP3B-210ENST00000444502 HAND2P61296 217 aa12.47□□□□□ -0.41
TOP3B-210ENST00000444502 KLHL40Q2TBA0 621 aa12.47□□□□□ -0.41
TOP3B-210ENST00000444502 DZIP1Q86YF9 867 aaKnown RBP12.47□□□□□ -0.41
TOP3B-210ENST00000444502 SUCLG2Q96I99 432 aa12.47□□□□□ -0.41
TOP3B-210ENST00000444502 CCDC94Q9BW85 323 aaPredicted RBP12.47□□□□□ -0.41
TOP3B-210ENST00000444502 NDUFB9Q9Y6M9 179 aa12.47□□□□□ -0.41
TOP3B-210ENST00000444502 DYNC1I1O14576 645 aa12.47□□□□□ -0.41
TOP3B-210ENST00000444502 CCDC34Q96HJ3 373 aa12.47□□□□□ -0.41
TOP3B-210ENST00000444502 PDCP20941 246 aa12.46□□□□□ -0.41
TOP3B-210ENST00000444502 SAFBQ15424 915 aaKnown RBP eCLIP12.46□□□□□ -0.41
TOP3B-210ENST00000444502 ZSCAN25Q6NSZ9 544 aa12.46□□□□□ -0.41
TOP3B-210ENST00000444502 BABAM1Q9NWV8 329 aa12.46□□□□□ -0.41
TOP3B-210ENST00000444502 RBM8AQ9Y5S9 174 aaKnown RBP12.46□□□□□ -0.41
TOP3B-210ENST00000444502 GOLGA6L6A8MZA4 724 aa12.46□□□□□ -0.41
TOP3B-210ENST00000444502 ERBB3P21860 1342 aa12.46□□□□□ -0.41
TOP3B-210ENST00000444502 KIF24Q5T7B8 1368 aa12.46□□□□□ -0.41
TOP3B-210ENST00000444502 LRRC2Q9BYS8 371 aa12.46□□□□□ -0.41
TOP3B-210ENST00000444502 ASAP1Q9ULH1 1129 aa12.46□□□□□ -0.41
TOP3B-210ENST00000444502 NRDCO43847 1150 aa12.46□□□□□ -0.42
TOP3B-210ENST00000444502 SSH3Q8TE77 659 aa12.46□□□□□ -0.42
TOP3B-210ENST00000444502 ZSCAN31Q96LW9 406 aaPredicted RBP12.46□□□□□ -0.42
TOP3B-210ENST00000444502 FSD2A1L4K1 749 aa12.45□□□□□ -0.42
TOP3B-210ENST00000444502 NMIQ13287 307 aaPredicted RBP12.45□□□□□ -0.42
TOP3B-210ENST00000444502 NSFL1CQ9UNZ2 370 aaKnown RBP12.45□□□□□ -0.42
TOP3B-210ENST00000444502 PREX1Q8TCU6 1659 aa12.45□□□□□ -0.42
TOP3B-210ENST00000444502 GJB2P29033 226 aa12.45□□□□□ -0.42
TOP3B-210ENST00000444502 ATP2B3Q16720 1220 aa12.45□□□□□ -0.42
TOP3B-210ENST00000444502 CCDC152Q4G0S7 254 aa12.45□□□□□ -0.42
TOP3B-210ENST00000444502 BEND3Q5T5X7 828 aa12.45□□□□□ -0.42
TOP3B-210ENST00000444502 SASS6Q6UVJ0 657 aa12.45□□□□□ -0.42
TOP3B-210ENST00000444502 BECN2A8MW95 431 aa12.45□□□□□ -0.42
TOP3B-210ENST00000444502 SLC3A2P08195 630 aaKnown RBP12.45□□□□□ -0.42
TOP3B-210ENST00000444502 AK2P54819 239 aa12.45□□□□□ -0.42
TOP3B-210ENST00000444502 DMTNQ08495 405 aa12.45□□□□□ -0.42
TOP3B-210ENST00000444502 TFIP11Q9UBB9 837 aaKnown RBP12.45□□□□□ -0.42
TOP3B-210ENST00000444502 F8W031 263 aaPredicted RBP12.44□□□□□ -0.42
TOP3B-210ENST00000444502 MAP3K12Q12852 859 aa12.44□□□□□ -0.42
TOP3B-210ENST00000444502 GAS2L3Q86XJ1 694 aa12.44□□□□□ -0.42
TOP3B-210ENST00000444502 ANKRD18AQ8IVF6 992 aa12.44□□□□□ -0.42
TOP3B-210ENST00000444502 ZNF594Q96JF6 807 aaPredicted RBP12.44□□□□□ -0.42
TOP3B-210ENST00000444502 UTP14AQ9BVJ6 771 aaKnown RBP12.44□□□□□ -0.42
TOP3B-210ENST00000444502 NAPBQ9H115 298 aa12.44□□□□□ -0.42
TOP3B-210ENST00000444502 STX6O43752 255 aa12.44□□□□□ -0.42
TOP3B-210ENST00000444502 USP5P45974 858 aa12.44□□□□□ -0.42
TOP3B-210ENST00000444502 ANAPC15P60006 121 aa12.44□□□□□ -0.42
TOP3B-210ENST00000444502 TIMM10P62072 90 aa12.44□□□□□ -0.42
TOP3B-210ENST00000444502 KRT85P78386 507 aa12.44□□□□□ -0.42
TOP3B-210ENST00000444502 ADAMTS13Q76LX8 1427 aa12.44□□□□□ -0.42
TOP3B-210ENST00000444502 HOXB7P09629 217 aa12.44□□□□□ -0.42
TOP3B-210ENST00000444502 ANKRD1Q15327 319 aa12.44□□□□□ -0.42
TOP3B-210ENST00000444502 EDC3Q96F86 508 aaKnown RBP12.44□□□□□ -0.42
TOP3B-210ENST00000444502 UBAC1Q9BSL1 405 aa12.44□□□□□ -0.42
TOP3B-210ENST00000444502 TMEM131LA2VDJ0 1609 aa12.44□□□□□ -0.42
TOP3B-210ENST00000444502 ZSCAN23Q3MJ62 389 aa12.44□□□□□ -0.42
TOP3B-210ENST00000444502 TPTE2Q6XPS3 522 aa12.44□□□□□ -0.42
TOP3B-210ENST00000444502 NEURL4Q96JN8 1562 aa12.43□□□□□ -0.42
TOP3B-210ENST00000444502 GOLGA6L19H0YKK7 550 aa12.43□□□□□ -0.42
TOP3B-210ENST00000444502 TFCP2Q12800 502 aa12.43□□□□□ -0.42
TOP3B-210ENST00000444502 RAB11FIP4Q86YS3 637 aa12.43□□□□□ -0.42
TOP3B-210ENST00000444502 FAM227BQ96M60 508 aa12.43□□□□□ -0.42
TOP3B-210ENST00000444502 CAMK4Q16566 473 aa12.43□□□□□ -0.42
TOP3B-210ENST00000444502 TTLL7Q6ZT98 887 aa12.43□□□□□ -0.42
TOP3B-210ENST00000444502 GUCY1B3Q02153 619 aa12.43□□□□□ -0.42
TOP3B-210ENST00000444502 PDCL2Q8N4E4 241 aa12.43□□□□□ -0.42
TOP3B-210ENST00000444502 QTRT2Q9H974 415 aaKnown RBP12.43□□□□□ -0.42
TOP3B-210ENST00000444502 ARHGEF28Q8N1W1 1705 aaKnown RBP12.42□□□□□ -0.42
TOP3B-210ENST00000444502 SGSM2O43147 1006 aa12.42□□□□□ -0.42
TOP3B-210ENST00000444502 LETM1O95202 739 aaPredicted RBP12.42□□□□□ -0.42
TOP3B-210ENST00000444502 IMMTQ16891 758 aaKnown RBP12.42□□□□□ -0.42
TOP3B-210ENST00000444502 TRAPPC3LQ5T215 181 aa12.42□□□□□ -0.42
TOP3B-210ENST00000444502 TCEAL9Q9UHQ7 104 aa12.42□□□□□ -0.42
TOP3B-210ENST00000444502 CCT2P78371 535 aaKnown RBP12.42□□□□□ -0.42
TOP3B-210ENST00000444502 IRX3P78415 501 aaPredicted RBP12.42□□□□□ -0.42
TOP3B-210ENST00000444502 SPC24Q8NBT2 197 aa12.42□□□□□ -0.42
TOP3B-210ENST00000444502 CDCA7Q9BWT1 371 aaPredicted RBP12.42□□□□□ -0.42
TOP3B-210ENST00000444502 CTNNA3Q9UI47 895 aa12.42□□□□□ -0.42
TOP3B-210ENST00000444502 CNPY2Q9Y2B0 182 aa12.42□□□□□ -0.42
TOP3B-210ENST00000444502 APBA3O96018 575 aa12.42□□□□□ -0.42
TOP3B-210ENST00000444502 ST5P78524 1137 aa12.42□□□□□ -0.42
TOP3B-210ENST00000444502 ADGRL3Q9HAR2 1447 aa12.42□□□□□ -0.42
TOP3B-210ENST00000444502 TTC41PQ6P2S7 1318 aa12.42□□□□□ -0.42
TOP3B-210ENST00000444502 CCDC69A6NI79 296 aa12.41□□□□□ -0.42
TOP3B-210ENST00000444502 RANBP6O60518 1105 aaKnown RBP12.41□□□□□ -0.42
TOP3B-210ENST00000444502 POLR3DP05423 398 aaPredicted RBP12.41□□□□□ -0.42
TOP3B-210ENST00000444502 CCDC73Q6ZRK6 1079 aa12.41□□□□□ -0.42
TOP3B-210ENST00000444502 IBTKQ9P2D0 1353 aaPredicted RBP12.41□□□□□ -0.42
TOP3B-210ENST00000444502 SPATA32Q96LK8 384 aa12.41□□□□□ -0.42
TOP3B-210ENST00000444502 SPATA31A3Q5VYP0 1347 aa12.41□□□□□ -0.42
TOP3B-210ENST00000444502 MPHOSPH10O00566 681 aaKnown RBP12.41□□□□□ -0.42
TOP3B-210ENST00000444502 KRT32Q14532 448 aa12.41□□□□□ -0.42
TOP3B-210ENST00000444502 SH2B1Q9NRF2 756 aaPredicted RBP12.41□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms