RNA–Protein interactions for RNA: ENST00000443528.5

ACTB-206, Transcript of actin beta, humanhuman

TSL 4

Gene ACTB, Length 569 nt, Biotype protein coding, Subcellular localisation Cell leading edge, Cytoplasm, Cytosol, Exosome, Lamellipodium, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTB-206ENST00000443528 TAOK3Q9H2K8 898 aa19.99■□□□□ 0.79
ACTB-206ENST00000443528 PTPRCP08575 1304 aa19.99■□□□□ 0.79
ACTB-206ENST00000443528 BBOX1O75936 387 aa19.98■□□□□ 0.79
ACTB-206ENST00000443528 SLC4A10Q6U841 1118 aa19.98■□□□□ 0.79
ACTB-206ENST00000443528 RTKN2Q8IZC4 609 aa19.98■□□□□ 0.79
ACTB-206ENST00000443528 COL4A1P02462 1669 aa19.97■□□□□ 0.79
ACTB-206ENST00000443528 BRPF1P55201 1214 aaPredicted RBP19.97■□□□□ 0.79
ACTB-206ENST00000443528 FKBP4Q02790 459 aaKnown RBP eCLIP19.97■□□□□ 0.792e-6■■□□□ 13.5
ACTB-206ENST00000443528 CC2D2BQ6DHV5 1058 aa19.97■□□□□ 0.79
ACTB-206ENST00000443528 CELF1Q92879 486 aaKnown RBP19.97■□□□□ 0.79
ACTB-206ENST00000443528 ATP6V0A2Q9Y487 856 aa19.97■□□□□ 0.79
ACTB-206ENST00000443528 SEC31BQ9NQW1 1179 aa19.96■□□□□ 0.79
ACTB-206ENST00000443528 TAF1P21675 1872 aa19.95■□□□□ 0.78
ACTB-206ENST00000443528 ALDH1L1O75891 902 aa19.95■□□□□ 0.78
ACTB-206ENST00000443528 CTSWP56202 376 aa19.95■□□□□ 0.78
ACTB-206ENST00000443528 SP8Q8IXZ3 490 aa19.95■□□□□ 0.78
ACTB-206ENST00000443528 TTLL11Q8NHH1 800 aa19.95■□□□□ 0.78
ACTB-206ENST00000443528 CCDC85AQ96PX6 553 aaPredicted RBP19.95■□□□□ 0.78
ACTB-206ENST00000443528 PLA2G12BQ9BX93 195 aa19.95■□□□□ 0.78
ACTB-206ENST00000443528 SRCIN1Q9C0H9 1055 aa19.95■□□□□ 0.78
ACTB-206ENST00000443528 NOB1Q9ULX3 412 aaKnown RBP19.95■□□□□ 0.78
ACTB-206ENST00000443528 CCDC152Q4G0S7 254 aa19.94■□□□□ 0.78
ACTB-206ENST00000443528 PSMD1Q99460 953 aa19.94■□□□□ 0.78
ACTB-206ENST00000443528 ZNF277Q9NRM2 450 aaPredicted RBP19.94■□□□□ 0.78
ACTB-206ENST00000443528 GRIPAP1Q4V328 841 aa19.93■□□□□ 0.78
ACTB-206ENST00000443528 ZNF526Q8TF50 670 aaPredicted RBP19.93■□□□□ 0.78
ACTB-206ENST00000443528 GRM8O00222 908 aa19.92■□□□□ 0.78
ACTB-206ENST00000443528 RPS8P62241 208 aaKnown RBP19.92■□□□□ 0.78
ACTB-206ENST00000443528 TMC4Q7Z404 712 aa19.92■□□□□ 0.78
ACTB-206ENST00000443528 ZC3H4Q9UPT8 1303 aaKnown RBP19.92■□□□□ 0.78
ACTB-206ENST00000443528 CCDC88AQ3V6T2 1871 aa19.91■□□□□ 0.78
ACTB-206ENST00000443528 CSF1RP07333 972 aa19.91■□□□□ 0.78
ACTB-206ENST00000443528 GREM2Q9H772 168 aa19.91■□□□□ 0.78
ACTB-206ENST00000443528 BCAR3O75815 825 aa19.9■□□□□ 0.78
ACTB-206ENST00000443528 IARSP41252 1262 aaKnown RBP19.9■□□□□ 0.78
ACTB-206ENST00000443528 FOXO4P98177 505 aa19.9■□□□□ 0.78
ACTB-206ENST00000443528 TMX4Q9H1E5 349 aaPredicted RBP19.9■□□□□ 0.78
ACTB-206ENST00000443528 GPBP1L1Q9HC44 474 aaPredicted RBP19.9■□□□□ 0.78
ACTB-206ENST00000443528 C9orf78Q9NZ63 289 aaPredicted RBP19.9■□□□□ 0.78
ACTB-206ENST00000443528 RTL9Q8NET4 1388 aa19.9■□□□□ 0.78
ACTB-206ENST00000443528 LRRC37AA6NMS7 1700 aa19.89■□□□□ 0.77
ACTB-206ENST00000443528 UTYO14607 1347 aa19.89■□□□□ 0.77
ACTB-206ENST00000443528 EPHA10Q5JZY3 1008 aa19.89■□□□□ 0.77
ACTB-206ENST00000443528 TIAM2Q8IVF5 1701 aa19.89■□□□□ 0.77
ACTB-206ENST00000443528 MPNDQ8N594 471 aa19.89■□□□□ 0.77
ACTB-206ENST00000443528 RTFDC1Q9BY42 306 aaPredicted RBP19.89■□□□□ 0.77
ACTB-206ENST00000443528 KIF16BQ96L93 1317 aa19.88■□□□□ 0.77
ACTB-206ENST00000443528 NBPF7P0C2Y1 421 aaPredicted RBP19.88■□□□□ 0.77
ACTB-206ENST00000443528 DPP8Q6V1X1 898 aaPredicted RBP19.88■□□□□ 0.77
ACTB-206ENST00000443528 ARHGAP45Q92619 1136 aa19.88■□□□□ 0.77
ACTB-206ENST00000443528 API5Q9BZZ5 524 aaKnown RBP19.88■□□□□ 0.77
ACTB-206ENST00000443528 DICER1Q9UPY3 1922 aaKnown RBP19.88■□□□□ 0.77
ACTB-206ENST00000443528 MYH3P11055 1940 aa19.87■□□□□ 0.77
ACTB-206ENST00000443528 FAM161AQ3B820 660 aa19.87■□□□□ 0.77
ACTB-206ENST00000443528 ANKRD18AQ8IVF6 992 aa19.87■□□□□ 0.77
ACTB-206ENST00000443528 KAZALD1Q96I82 304 aa19.87■□□□□ 0.77
ACTB-206ENST00000443528 SUCLG2Q96I99 432 aa19.87■□□□□ 0.77
ACTB-206ENST00000443528 COL4A5P29400 1685 aa19.87■□□□□ 0.77
ACTB-206ENST00000443528 GLTPD2A6NH11 291 aa19.86■□□□□ 0.77
ACTB-206ENST00000443528 ITGA6P23229 1130 aa19.86■□□□□ 0.77
ACTB-206ENST00000443528 GPSM2P81274 684 aa19.86■□□□□ 0.77
ACTB-206ENST00000443528 CDC5LQ99459 802 aaKnown RBP19.86■□□□□ 0.77
ACTB-206ENST00000443528 USP44Q9H0E7 712 aa19.86■□□□□ 0.77
ACTB-206ENST00000443528 DUOX1Q9NRD9 1551 aa19.86■□□□□ 0.77
ACTB-206ENST00000443528 LMBR1LQ6UX01 489 aa19.85■□□□□ 0.77
ACTB-206ENST00000443528 SUPT20HQ8NEM7 779 aa19.85■□□□□ 0.77
ACTB-206ENST00000443528 NMRK2Q9NPI5 230 aa19.85■□□□□ 0.77
ACTB-206ENST00000443528 NSFL1CQ9UNZ2 370 aaKnown RBP19.85■□□□□ 0.77
ACTB-206ENST00000443528 KDM2BQ8NHM5 1336 aa19.84■□□□□ 0.77
ACTB-206ENST00000443528 CCT4P50991 539 aaKnown RBP19.84■□□□□ 0.77
ACTB-206ENST00000443528 AOC3Q16853 763 aa19.84■□□□□ 0.77
ACTB-206ENST00000443528 VPS33BQ9H267 617 aa19.84■□□□□ 0.77
ACTB-206ENST00000443528 BSDC1Q9NW68 430 aaPredicted RBP19.84■□□□□ 0.77
ACTB-206ENST00000443528 POLLQ9UGP5 575 aa19.84■□□□□ 0.77
ACTB-206ENST00000443528 TNNQ9UQP3 1299 aa19.84■□□□□ 0.77
ACTB-206ENST00000443528 LTBP1Q14766 1721 aa19.83■□□□□ 0.77
ACTB-206ENST00000443528 FZD9O00144 591 aa19.83■□□□□ 0.77
ACTB-206ENST00000443528 KIF3CO14782 793 aa19.83■□□□□ 0.77
ACTB-206ENST00000443528 PPIP5K2O43314 1243 aa19.83■□□□□ 0.77
ACTB-206ENST00000443528 TRIM27P14373 513 aa19.83■□□□□ 0.77
ACTB-206ENST00000443528 LARGE2Q8N3Y3 721 aa19.83■□□□□ 0.77
ACTB-206ENST00000443528 FRAT1Q92837 279 aaPredicted RBP19.83■□□□□ 0.77
ACTB-206ENST00000443528 PODXL2Q9NZ53 605 aa19.83■□□□□ 0.77
ACTB-206ENST00000443528 IPO8O15397 1037 aaKnown RBP19.82■□□□□ 0.76
ACTB-206ENST00000443528 KIAA2012Q0VF49 1180 aa19.82■□□□□ 0.76
ACTB-206ENST00000443528 DPY19L2Q6NUT2 758 aa19.82■□□□□ 0.76
ACTB-206ENST00000443528 ATF7IPQ6VMQ6 1270 aa19.82■□□□□ 0.76
ACTB-206ENST00000443528 JDP2Q8WYK2 163 aa19.82■□□□□ 0.76
ACTB-206ENST00000443528 ZNF541Q9H0D2 1346 aa19.81■□□□□ 0.76
ACTB-206ENST00000443528 ANKRD18BA2A2Z9 1011 aa19.81■□□□□ 0.76
ACTB-206ENST00000443528 DDNO94850 711 aaPredicted RBP19.81■□□□□ 0.76
ACTB-206ENST00000443528 IGHMBP2P38935 993 aaKnown RBP19.81■□□□□ 0.76
ACTB-206ENST00000443528 INTS3Q68E01 1043 aaKnown RBP19.81■□□□□ 0.76
ACTB-206ENST00000443528 TBC1D16Q8TBP0 767 aa19.81■□□□□ 0.76
ACTB-206ENST00000443528 BICC1Q9H694 974 aaKnown RBP19.81■□□□□ 0.76
ACTB-206ENST00000443528 RRAGCQ9HB90 399 aa19.81■□□□□ 0.76
ACTB-206ENST00000443528 MINPP1Q9UNW1 487 aa19.81■□□□□ 0.76
ACTB-206ENST00000443528 CHMP3Q9Y3E7 222 aa19.81■□□□□ 0.76
ACTB-206ENST00000443528 C6orf229H3BNL8 230 aa19.8■□□□□ 0.76
ACTB-206ENST00000443528 IFIT5Q13325 482 aaKnown RBP19.8■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 77.9 ms