RNA–Protein interactions for RNA: ENST00000442830.5

PTPRE-203, Transcript of protein tyrosine phosphatase, receptor type E, humanhuman

TSL 5

Gene PTPRE, Length 779 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRE-203ENST00000442830 ANXA1P04083 346 aa17.95■□□□□ 0.46
PTPRE-203ENST00000442830 ECE1P42892 770 aa17.95■□□□□ 0.46
PTPRE-203ENST00000442830 KIAA2012Q0VF49 1180 aa17.95■□□□□ 0.46
PTPRE-203ENST00000442830 C3orf67Q6ZVT6 689 aa17.95■□□□□ 0.46
PTPRE-203ENST00000442830 CFAP44Q96MT7 982 aa17.95■□□□□ 0.46
PTPRE-203ENST00000442830 ABT1Q9ULW3 272 aaKnown RBP17.95■□□□□ 0.46
PTPRE-203ENST00000442830 LAS1LQ9Y4W2 734 aaKnown RBP17.95■□□□□ 0.46
PTPRE-203ENST00000442830 DDX60Q8IY21 1712 aaKnown RBP17.95■□□□□ 0.46
PTPRE-203ENST00000442830 DDX10Q13206 875 aaKnown RBP17.94■□□□□ 0.46
PTPRE-203ENST00000442830 ANKRD13DQ6ZTN6 518 aa17.94■□□□□ 0.46
PTPRE-203ENST00000442830 CCDC146Q8IYE0 955 aa17.94■□□□□ 0.46
PTPRE-203ENST00000442830 GPRC5DQ9NZD1 345 aa17.94■□□□□ 0.46
PTPRE-203ENST00000442830 CHPF2Q9P2E5 772 aa17.94■□□□□ 0.46
PTPRE-203ENST00000442830 HCLS1P14317 486 aaPredicted RBP17.93■□□□□ 0.46
PTPRE-203ENST00000442830 EPS15P42566 896 aa17.93■□□□□ 0.46
PTPRE-203ENST00000442830 CIAPIN1Q6FI81 312 aa17.93■□□□□ 0.46
PTPRE-203ENST00000442830 NECTIN2Q92692 538 aa17.93■□□□□ 0.46
PTPRE-203ENST00000442830 TRIM35Q9UPQ4 493 aa17.93■□□□□ 0.46
PTPRE-203ENST00000442830 THSD7BQ9C0I4 1608 aa17.93■□□□□ 0.46
PTPRE-203ENST00000442830 FOXN1O15353 648 aa17.92■□□□□ 0.46
PTPRE-203ENST00000442830 ZC3H15Q8WU90 426 aaKnown RBP17.92■□□□□ 0.46
PTPRE-203ENST00000442830 WBP1LQ9NX94 342 aa17.92■□□□□ 0.46
PTPRE-203ENST00000442830 WDR33Q9C0J8 1336 aaKnown RBP17.92■□□□□ 0.46
PTPRE-203ENST00000442830 CXCL9Q07325 125 aa17.91■□□□□ 0.46
PTPRE-203ENST00000442830 TRIM28Q13263 835 aaKnown RBP17.91■□□□□ 0.46
PTPRE-203ENST00000442830 ISCA1Q9BUE6 129 aa17.91■□□□□ 0.46
PTPRE-203ENST00000442830 BCL2L13Q9BXK5 485 aa17.91■□□□□ 0.46
PTPRE-203ENST00000442830 SF3B3Q15393 1217 aaKnown RBP17.9■□□□□ 0.46
PTPRE-203ENST00000442830 BEGAINQ9BUH8 593 aa17.9■□□□□ 0.46
PTPRE-203ENST00000442830 ADAMTS8Q9UP79 889 aa17.9■□□□□ 0.46
PTPRE-203ENST00000442830 TAF1P21675 1872 aa17.89■□□□□ 0.45
PTPRE-203ENST00000442830 CAPN15O75808 1086 aa17.89■□□□□ 0.45
PTPRE-203ENST00000442830 GNAI1P63096 354 aa17.89■□□□□ 0.45
PTPRE-203ENST00000442830 GOLGA2Q08379 1002 aa17.89■□□□□ 0.45
PTPRE-203ENST00000442830 DUSP27Q5VZP5 1158 aa17.89■□□□□ 0.45
PTPRE-203ENST00000442830 EYA3Q99504 573 aa17.89■□□□□ 0.45
PTPRE-203ENST00000442830 IFT57Q9NWB7 429 aa17.89■□□□□ 0.45
PTPRE-203ENST00000442830 H7C1D1 291 aa17.88■□□□□ 0.45
PTPRE-203ENST00000442830 GMPSP49915 693 aaPredicted RBP17.88■□□□□ 0.45
PTPRE-203ENST00000442830 KRT24Q2M2I5 525 aa17.88■□□□□ 0.45
PTPRE-203ENST00000442830 HHIPL1Q96JK4 782 aa17.88■□□□□ 0.45
PTPRE-203ENST00000442830 PGAP2Q9UHJ9 254 aa17.88■□□□□ 0.45
PTPRE-203ENST00000442830 TLL2Q9Y6L7 1015 aa17.88■□□□□ 0.45
PTPRE-203ENST00000442830 DUOX1Q9NRD9 1551 aa17.87■□□□□ 0.45
PTPRE-203ENST00000442830 WASHC4Q2M389 1173 aa17.87■□□□□ 0.45
PTPRE-203ENST00000442830 DPF2Q92785 391 aa17.87■□□□□ 0.45
PTPRE-203ENST00000442830 CAPNS2Q96L46 248 aa17.87■□□□□ 0.45
PTPRE-203ENST00000442830 PRKRIP1Q9H875 184 aaPredicted RBP17.87■□□□□ 0.45
PTPRE-203ENST00000442830 RPS12P25398 132 aaKnown RBP17.86■□□□□ 0.45
PTPRE-203ENST00000442830 MAP2K2P36507 400 aa17.86■□□□□ 0.45
PTPRE-203ENST00000442830 PAXIP1Q6ZW49 1069 aaPredicted RBP17.86■□□□□ 0.45
PTPRE-203ENST00000442830 RIC3Q7Z5B4 369 aa17.86■□□□□ 0.45
PTPRE-203ENST00000442830 MBIPQ9NS73 344 aa17.86■□□□□ 0.45
PTPRE-203ENST00000442830 IRS4O14654 1257 aaPredicted RBP17.85■□□□□ 0.45
PTPRE-203ENST00000442830 CA12O43570 354 aa17.85■□□□□ 0.45
PTPRE-203ENST00000442830 DDX58O95786 925 aaKnown RBP17.85■□□□□ 0.45
PTPRE-203ENST00000442830 ZNF853P0CG23 659 aa17.85■□□□□ 0.45
PTPRE-203ENST00000442830 CDC37L1Q7L3B6 337 aa17.85■□□□□ 0.45
PTPRE-203ENST00000442830 ZBTB38Q8NAP3 1195 aaPredicted RBP17.85■□□□□ 0.45
PTPRE-203ENST00000442830 FAM89AQ96GI7 184 aa17.85■□□□□ 0.45
PTPRE-203ENST00000442830 RAD17O75943 681 aa17.84■□□□□ 0.45
PTPRE-203ENST00000442830 CCDC191Q8NCU4 936 aa17.84■□□□□ 0.45
PTPRE-203ENST00000442830 CNOT7Q9UIV1 285 aaKnown RBP17.84■□□□□ 0.45
PTPRE-203ENST00000442830 NSFL1CQ9UNZ2 370 aaKnown RBP17.84■□□□□ 0.45
PTPRE-203ENST00000442830 ATP5J2-PTCD1G3V325 749 aa17.83■□□□□ 0.44
PTPRE-203ENST00000442830 CELF2O95319 508 aaKnown RBP17.83■□□□□ 0.44
PTPRE-203ENST00000442830 HSPA8P11142 646 aaKnown RBP17.83■□□□□ 0.44
PTPRE-203ENST00000442830 LBX1P52954 281 aa17.83■□□□□ 0.44
PTPRE-203ENST00000442830 RPS8P62241 208 aaKnown RBP17.83■□□□□ 0.44
PTPRE-203ENST00000442830 CCDC152Q4G0S7 254 aa17.83■□□□□ 0.44
PTPRE-203ENST00000442830 CST9Q5W186 159 aa17.83■□□□□ 0.44
PTPRE-203ENST00000442830 SLC51AQ86UW1 340 aa17.83■□□□□ 0.44
PTPRE-203ENST00000442830 GPR101Q96P66 508 aaPredicted RBP17.83■□□□□ 0.44
PTPRE-203ENST00000442830 C6orf229H3BNL8 230 aa17.82■□□□□ 0.44
PTPRE-203ENST00000442830 CCDC30Q5VVM6 783 aa17.82■□□□□ 0.44
PTPRE-203ENST00000442830 SAPCD2Q86UD0 394 aa17.82■□□□□ 0.44
PTPRE-203ENST00000442830 CELF1Q92879 486 aaKnown RBP17.82■□□□□ 0.44
PTPRE-203ENST00000442830 PODXL2Q9NZ53 605 aa17.82■□□□□ 0.44
PTPRE-203ENST00000442830 MYH3P11055 1940 aa17.82■□□□□ 0.44
PTPRE-203ENST00000442830 YDJCA8MPS7 323 aa17.81■□□□□ 0.44
PTPRE-203ENST00000442830 TRAF5O00463 557 aa17.81■□□□□ 0.44
PTPRE-203ENST00000442830 APAF1O14727 1248 aa17.81■□□□□ 0.44
PTPRE-203ENST00000442830 PCCAP05165 728 aaPredicted RBP17.81■□□□□ 0.44
PTPRE-203ENST00000442830 MICALL2Q8IY33 904 aa17.81■□□□□ 0.44
PTPRE-203ENST00000442830 CACNA1FO60840 1977 aa17.8■□□□□ 0.44
PTPRE-203ENST00000442830 PSME4Q14997 1843 aa17.8■□□□□ 0.44
PTPRE-203ENST00000442830 PDE8AO60658 829 aa17.8■□□□□ 0.44
PTPRE-203ENST00000442830 CYP4F22Q6NT55 531 aa17.8■□□□□ 0.44
PTPRE-203ENST00000442830 ZC3H12CQ9C0D7 883 aaKnown RBP17.8■□□□□ 0.44
PTPRE-203ENST00000442830 CWC25Q9NXE8 425 aaPredicted RBP17.8■□□□□ 0.44
PTPRE-203ENST00000442830 ZNF609O15014 1411 aa17.8■□□□□ 0.44
PTPRE-203ENST00000442830 G3V3G9 751 aa17.79■□□□□ 0.44
PTPRE-203ENST00000442830 PSMD14O00487 310 aa17.79■□□□□ 0.44
PTPRE-203ENST00000442830 ECE2O60344 883 aa17.79■□□□□ 0.44
PTPRE-203ENST00000442830 BRPF1P55201 1214 aaPredicted RBP17.79■□□□□ 0.44
PTPRE-203ENST00000442830 GPSM2P81274 684 aa17.79■□□□□ 0.44
PTPRE-203ENST00000442830 DCAF8Q5TAQ9 597 aa17.79■□□□□ 0.44
PTPRE-203ENST00000442830 GLIS2Q9BZE0 524 aaPredicted RBP17.79■□□□□ 0.44
PTPRE-203ENST00000442830 DBNDD1Q9H9R9 158 aa17.79■□□□□ 0.44
PTPRE-203ENST00000442830 POLLQ9UGP5 575 aa17.79■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms