RNA–Protein interactions for RNA: ENST00000439977.6

HERPUD1-204, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene HERPUD1, Length 2,946 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-204ENST00000439977 FAM184AQ8NB25 1140 aa16.13■□□□□ 0.17
HERPUD1-204ENST00000439977 KIAA2012Q0VF49 1180 aa16.12■□□□□ 0.17
HERPUD1-204ENST00000439977 CEBPZQ03701 1054 aaKnown RBP16.12■□□□□ 0.17
HERPUD1-204ENST00000439977 TNNI3KQ59H18 835 aa16.12■□□□□ 0.17
HERPUD1-204ENST00000439977 NEUROD6Q96NK8 337 aa16.12■□□□□ 0.17
HERPUD1-204ENST00000439977 FPGT-TNNI3KV9GXZ4 949 aa16.12■□□□□ 0.17
HERPUD1-204ENST00000439977 COL15A1P39059 1388 aa16.12■□□□□ 0.17
HERPUD1-204ENST00000439977 KDM4AO75164 1064 aa16.12■□□□□ 0.17
HERPUD1-204ENST00000439977 HSP90B1P14625 803 aaKnown RBP16.12■□□□□ 0.17
HERPUD1-204ENST00000439977 KRT85P78386 507 aa16.12■□□□□ 0.17
HERPUD1-204ENST00000439977 TSC1Q92574 1164 aa16.12■□□□□ 0.17
HERPUD1-204ENST00000439977 MCM5P33992 734 aa16.11■□□□□ 0.17
HERPUD1-204ENST00000439977 CYP27B1O15528 508 aa16.11■□□□□ 0.17
HERPUD1-204ENST00000439977 LMBR1LQ6UX01 489 aa16.11■□□□□ 0.17
HERPUD1-204ENST00000439977 FUCA2Q9BTY2 467 aa16.11■□□□□ 0.17
HERPUD1-204ENST00000439977 KDM6AO15550 1401 aaPredicted RBP16.1■□□□□ 0.17
HERPUD1-204ENST00000439977 NPHP4O75161 1426 aaPredicted RBP16.1■□□□□ 0.17
HERPUD1-204ENST00000439977 GOLGA6L4A6NEF3 574 aa16.1■□□□□ 0.17
HERPUD1-204ENST00000439977 LETM1O95202 739 aaPredicted RBP16.1■□□□□ 0.17
HERPUD1-204ENST00000439977 FGD1P98174 961 aa16.1■□□□□ 0.17
HERPUD1-204ENST00000439977 NCAPD2Q15021 1401 aa16.1■□□□□ 0.17
HERPUD1-204ENST00000439977 SNRPA1P09661 255 aaKnown RBP16.1■□□□□ 0.17
HERPUD1-204ENST00000439977 TIMM10P62072 90 aa16.1■□□□□ 0.17
HERPUD1-204ENST00000439977 CSPP1Q1MSJ5 1256 aa16.1■□□□□ 0.17
HERPUD1-204ENST00000439977 DACT1Q9NYF0 836 aa16.1■□□□□ 0.17
HERPUD1-204ENST00000439977 NAP1L2Q9ULW6 460 aaPredicted RBP16.1■□□□□ 0.17
HERPUD1-204ENST00000439977 N4BP2Q86UW6 1770 aaPredicted RBP16.1■□□□□ 0.17
HERPUD1-204ENST00000439977 RFX5P48382 616 aaPredicted RBP16.09■□□□□ 0.17
HERPUD1-204ENST00000439977 UVSSAQ2YD98 709 aa16.09■□□□□ 0.17
HERPUD1-204ENST00000439977 Q6ZUG5 572 aa16.09■□□□□ 0.17
HERPUD1-204ENST00000439977 IFNL2Q8IZJ0 200 aa16.09■□□□□ 0.17
HERPUD1-204ENST00000439977 A0A0G2JLW4 131 aa16.09■□□□□ 0.17
HERPUD1-204ENST00000439977 LUZP1Q86V48 1076 aa16.09■□□□□ 0.17
HERPUD1-204ENST00000439977 VSIG10Q8N0Z9 540 aa16.09■□□□□ 0.17
HERPUD1-204ENST00000439977 NEK1Q96PY6 1258 aa16.09■□□□□ 0.17
HERPUD1-204ENST00000439977 FAM177BA6PVY3 158 aa16.08■□□□□ 0.17
HERPUD1-204ENST00000439977 CYP21A2P08686 494 aa16.08■□□□□ 0.17
HERPUD1-204ENST00000439977 CABP4P57796 275 aa16.08■□□□□ 0.17
HERPUD1-204ENST00000439977 LRP10Q7Z4F1 713 aa16.08■□□□□ 0.17
HERPUD1-204ENST00000439977 SPATA32Q96LK8 384 aa16.08■□□□□ 0.17
HERPUD1-204ENST00000439977 MED23Q9ULK4 1368 aa16.08■□□□□ 0.17
HERPUD1-204ENST00000439977 BRF1Q92994 677 aa16.08■□□□□ 0.16
HERPUD1-204ENST00000439977 COPRSQ9NQ92 184 aa16.08■□□□□ 0.16
HERPUD1-204ENST00000439977 LMO7Q8WWI1 1683 aa16.08■□□□□ 0.16
HERPUD1-204ENST00000439977 GOLIM4O00461 696 aa16.08■□□□□ 0.16
HERPUD1-204ENST00000439977 ATP5JP18859 108 aa16.08■□□□□ 0.16
HERPUD1-204ENST00000439977 NOLC1Q14978 699 aaKnown RBP eCLIP16.08■□□□□ 0.16
HERPUD1-204ENST00000439977 CHST3Q7LGC8 479 aa16.08■□□□□ 0.16
HERPUD1-204ENST00000439977 CCDC192P0DO97 292 aa16.07■□□□□ 0.16
HERPUD1-204ENST00000439977 ANKRD1Q15327 319 aa16.07■□□□□ 0.16
HERPUD1-204ENST00000439977 ZNF594Q96JF6 807 aaPredicted RBP16.07■□□□□ 0.16
HERPUD1-204ENST00000439977 NUP62CLQ9H1M0 184 aa16.07■□□□□ 0.16
HERPUD1-204ENST00000439977 ZNF330Q9Y3S2 320 aaPredicted RBP16.07■□□□□ 0.16
HERPUD1-204ENST00000439977 FMNL2Q96PY5 1086 aa16.07■□□□□ 0.16
HERPUD1-204ENST00000439977 PDCP20941 246 aa16.06■□□□□ 0.16
HERPUD1-204ENST00000439977 TTLL7Q6ZT98 887 aa16.06■□□□□ 0.16
HERPUD1-204ENST00000439977 CCDC85AQ96PX6 553 aaPredicted RBP16.06■□□□□ 0.16
HERPUD1-204ENST00000439977 USP54Q70EL1 1684 aa16.06■□□□□ 0.16
HERPUD1-204ENST00000439977 MAP3K11Q16584 847 aa16.06■□□□□ 0.16
HERPUD1-204ENST00000439977 BICD2Q8TD16 824 aa16.06■□□□□ 0.16
HERPUD1-204ENST00000439977 FTOQ9C0B1 505 aaKnown RBP eCLIP16.06■□□□□ 0.16
HERPUD1-204ENST00000439977 TNMDQ9H2S6 317 aa16.06■□□□□ 0.16
HERPUD1-204ENST00000439977 ZBTB3Q9H5J0 574 aa16.06■□□□□ 0.16
HERPUD1-204ENST00000439977 CHD2O14647 1828 aaKnown RBP16.06■□□□□ 0.16
HERPUD1-204ENST00000439977 MEGF6O75095 1541 aa16.06■□□□□ 0.16
HERPUD1-204ENST00000439977 H3BQV1 296 aa16.05■□□□□ 0.16
HERPUD1-204ENST00000439977 NR1I2O75469 434 aa16.05■□□□□ 0.16
HERPUD1-204ENST00000439977 CCT2P78371 535 aaKnown RBP16.05■□□□□ 0.16
HERPUD1-204ENST00000439977 IFFO2Q5TF58 517 aa16.05■□□□□ 0.16
HERPUD1-204ENST00000439977 LEO1Q8WVC0 666 aaPredicted RBP16.05■□□□□ 0.16
HERPUD1-204ENST00000439977 ZNF609O15014 1411 aa16.05■□□□□ 0.16
HERPUD1-204ENST00000439977 SASS6Q6UVJ0 657 aa16.05■□□□□ 0.16
HERPUD1-204ENST00000439977 STOX1Q6ZVD7 989 aa16.05■□□□□ 0.16
HERPUD1-204ENST00000439977 C19orf44Q9H6X5 657 aa16.05■□□□□ 0.16
HERPUD1-204ENST00000439977 SNRKQ9NRH2 765 aa16.05■□□□□ 0.16
HERPUD1-204ENST00000439977 A1BGP04217 495 aa16.05■□□□□ 0.16
HERPUD1-204ENST00000439977 TYRO3Q06418 890 aa16.05■□□□□ 0.16
HERPUD1-204ENST00000439977 MCMDC2Q4G0Z9 681 aa16.05■□□□□ 0.16
HERPUD1-204ENST00000439977 PIBF1Q8WXW3 757 aa16.05■□□□□ 0.16
HERPUD1-204ENST00000439977 ATF3P18847 181 aa16.04■□□□□ 0.16
HERPUD1-204ENST00000439977 GUCY1B3Q02153 619 aa16.04■□□□□ 0.16
HERPUD1-204ENST00000439977 ANO6Q4KMQ2 910 aa16.04■□□□□ 0.16
HERPUD1-204ENST00000439977 DCAF5Q96JK2 942 aa16.04■□□□□ 0.16
HERPUD1-204ENST00000439977 PGBD1Q96JS3 809 aa16.04■□□□□ 0.16
HERPUD1-204ENST00000439977 PDCL3Q9H2J4 239 aa16.04■□□□□ 0.16
HERPUD1-204ENST00000439977 NCOA5Q9HCD5 579 aaKnown RBP16.04■□□□□ 0.16
HERPUD1-204ENST00000439977 HMG20BQ9P0W2 317 aa16.04■□□□□ 0.16
HERPUD1-204ENST00000439977 TAOK2Q9UL54 1235 aa16.04■□□□□ 0.16
HERPUD1-204ENST00000439977 PYCARDQ9ULZ3 195 aa16.04■□□□□ 0.16
HERPUD1-204ENST00000439977 MRVI1Q9Y6F6 885 aa16.04■□□□□ 0.16
HERPUD1-204ENST00000439977 CRYBG1Q9Y4K1 1723 aa16.04■□□□□ 0.16
HERPUD1-204ENST00000439977 NBPF26B4DH59 902 aa16.04■□□□□ 0.16
HERPUD1-204ENST00000439977 SCRN1Q12765 414 aa16.04■□□□□ 0.16
HERPUD1-204ENST00000439977 LRRC24Q50LG9 513 aa16.04■□□□□ 0.16
HERPUD1-204ENST00000439977 NBPF14Q5TI25 921 aa16.04■□□□□ 0.16
HERPUD1-204ENST00000439977 NBPF10Q6P3W6 841 aaKnown RBP16.04■□□□□ 0.16
HERPUD1-204ENST00000439977 NBPF15Q8N660 670 aa16.04■□□□□ 0.16
HERPUD1-204ENST00000439977 GTF3C6Q969F1 213 aa16.04■□□□□ 0.16
HERPUD1-204ENST00000439977 A0A087WWV3 80 aa16.03■□□□□ 0.16
HERPUD1-204ENST00000439977 APOBRQ0VD83 1088 aa16.03■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms