RNA–Protein interactions for RNA: ENST00000439717.2

HSPG2-206, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 2

Gene HSPG2, Length 637 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-206ENST00000439717 IPO8O15397 1037 aaKnown RBP14.96□□□□□ -0.01
HSPG2-206ENST00000439717 CASP7P55210 303 aa14.96□□□□□ -0.01
HSPG2-206ENST00000439717 TMC4Q7Z404 712 aa14.96□□□□□ -0.01
HSPG2-206ENST00000439717 RTKN2Q8IZC4 609 aa14.96□□□□□ -0.01
HSPG2-206ENST00000439717 PLA2G12BQ9BX93 195 aa14.96□□□□□ -0.01
HSPG2-206ENST00000439717 TMX4Q9H1E5 349 aaPredicted RBP14.96□□□□□ -0.01
HSPG2-206ENST00000439717 CACNA1SQ13698 1873 aa14.95□□□□□ -0.02
HSPG2-206ENST00000439717 NFKBIEO00221 500 aa14.95□□□□□ -0.02
HSPG2-206ENST00000439717 CTSWP56202 376 aa14.95□□□□□ -0.02
HSPG2-206ENST00000439717 TAOK3Q9H2K8 898 aa14.95□□□□□ -0.02
HSPG2-206ENST00000439717 C9orf78Q9NZ63 289 aaPredicted RBP14.95□□□□□ -0.02
HSPG2-206ENST00000439717 ATP6V0A2Q9Y487 856 aa14.95□□□□□ -0.02
HSPG2-206ENST00000439717 LMNB1P20700 586 aa14.94□□□□□ -0.02
HSPG2-206ENST00000439717 CCT4P50991 539 aaKnown RBP14.94□□□□□ -0.02
HSPG2-206ENST00000439717 RASSF7Q02833 373 aa14.94□□□□□ -0.02
HSPG2-206ENST00000439717 SP8Q8IXZ3 490 aa14.94□□□□□ -0.02
HSPG2-206ENST00000439717 RTL9Q8NET4 1388 aa14.94□□□□□ -0.02
HSPG2-206ENST00000439717 UTYO14607 1347 aa14.93□□□□□ -0.02
HSPG2-206ENST00000439717 FER1L6Q2WGJ9 1857 aa14.93□□□□□ -0.02
HSPG2-206ENST00000439717 BCAR3O75815 825 aa14.93□□□□□ -0.02
HSPG2-206ENST00000439717 FKBP4Q02790 459 aaKnown RBP eCLIP14.93□□□□□ -0.02
HSPG2-206ENST00000439717 C9orf131Q5VYM1 1079 aa14.93□□□□□ -0.02
HSPG2-206ENST00000439717 TTLL11Q8NHH1 800 aa14.93□□□□□ -0.02
HSPG2-206ENST00000439717 SNED1Q8TER0 1413 aa14.92□□□□□ -0.02
HSPG2-206ENST00000439717 CSF1RP07333 972 aa14.92□□□□□ -0.02
HSPG2-206ENST00000439717 RPS8P62241 208 aaKnown RBP14.92□□□□□ -0.02
HSPG2-206ENST00000439717 OLFM4Q6UX06 510 aa14.92□□□□□ -0.02
HSPG2-206ENST00000439717 CELF1Q92879 486 aaKnown RBP14.92□□□□□ -0.02
HSPG2-206ENST00000439717 CDC5LQ99459 802 aaKnown RBP14.92□□□□□ -0.02
HSPG2-206ENST00000439717 PSMD1Q99460 953 aa14.92□□□□□ -0.02
HSPG2-206ENST00000439717 RNF181Q9P0P0 153 aa14.92□□□□□ -0.02
HSPG2-206ENST00000439717 ATF7IPQ6VMQ6 1270 aa14.91□□□□□ -0.02
HSPG2-206ENST00000439717 SEC31BQ9NQW1 1179 aa14.91□□□□□ -0.02
HSPG2-206ENST00000439717 ZC3H4Q9UPT8 1303 aaKnown RBP14.91□□□□□ -0.02
HSPG2-206ENST00000439717 PRELPP51888 382 aa14.9□□□□□ -0.02
HSPG2-206ENST00000439717 FOXO4P98177 505 aa14.9□□□□□ -0.02
HSPG2-206ENST00000439717 ZKSCAN2Q63HK3 967 aa14.9□□□□□ -0.02
HSPG2-206ENST00000439717 FRAT1Q92837 279 aaPredicted RBP14.9□□□□□ -0.02
HSPG2-206ENST00000439717 CCDC85AQ96PX6 553 aaPredicted RBP14.9□□□□□ -0.02
HSPG2-206ENST00000439717 GREM2Q9H772 168 aa14.9□□□□□ -0.02
HSPG2-206ENST00000439717 SBF1O95248 1867 aa14.9□□□□□ -0.02
HSPG2-206ENST00000439717 MYH3P11055 1940 aa14.9□□□□□ -0.02
HSPG2-206ENST00000439717 NBPF7P0C2Y1 421 aaPredicted RBP14.89□□□□□ -0.03
HSPG2-206ENST00000439717 TRIM27P14373 513 aa14.89□□□□□ -0.03
HSPG2-206ENST00000439717 INTS3Q68E01 1043 aaKnown RBP14.89□□□□□ -0.03
HSPG2-206ENST00000439717 ANKRD18AQ8IVF6 992 aa14.89□□□□□ -0.03
HSPG2-206ENST00000439717 SUPT20HQ8NEM7 779 aa14.89□□□□□ -0.03
HSPG2-206ENST00000439717 USP44Q9H0E7 712 aa14.89□□□□□ -0.03
HSPG2-206ENST00000439717 VPS33BQ9H267 617 aa14.89□□□□□ -0.03
HSPG2-206ENST00000439717 ITGA6P23229 1130 aa14.88□□□□□ -0.03
HSPG2-206ENST00000439717 DPP8Q6V1X1 898 aaPredicted RBP14.88□□□□□ -0.03
HSPG2-206ENST00000439717 MPNDQ8N594 471 aa14.88□□□□□ -0.03
HSPG2-206ENST00000439717 RTFDC1Q9BY42 306 aaPredicted RBP14.88□□□□□ -0.03
HSPG2-206ENST00000439717 LRRC37AA6NMS7 1700 aa14.87□□□□□ -0.03
HSPG2-206ENST00000439717 ANKRD18BA2A2Z9 1011 aa14.87□□□□□ -0.03
HSPG2-206ENST00000439717 IGHMBP2P38935 993 aaKnown RBP14.87□□□□□ -0.03
HSPG2-206ENST00000439717 IARSP41252 1262 aaKnown RBP14.87□□□□□ -0.03
HSPG2-206ENST00000439717 FAM161AQ3B820 660 aa14.87□□□□□ -0.03
HSPG2-206ENST00000439717 EPHA10Q5JZY3 1008 aa14.87□□□□□ -0.03
HSPG2-206ENST00000439717 LMBR1LQ6UX01 489 aa14.87□□□□□ -0.03
HSPG2-206ENST00000439717 ZNF784Q8NCA9 323 aaPredicted RBP14.87□□□□□ -0.03
HSPG2-206ENST00000439717 SUCLG2Q96I99 432 aa14.87□□□□□ -0.03
HSPG2-206ENST00000439717 ZNF277Q9NRM2 450 aaPredicted RBP14.87□□□□□ -0.03
HSPG2-206ENST00000439717 BSDC1Q9NW68 430 aaPredicted RBP14.87□□□□□ -0.03
HSPG2-206ENST00000439717 HDAC5Q9UQL6 1122 aa14.87□□□□□ -0.03
HSPG2-206ENST00000439717 TAF1P21675 1872 aa14.86□□□□□ -0.03
HSPG2-206ENST00000439717 IFIT5Q13325 482 aaKnown RBP14.86□□□□□ -0.03
HSPG2-206ENST00000439717 CCDC57Q2TAC2 916 aa14.86□□□□□ -0.03
HSPG2-206ENST00000439717 RABL6Q3YEC7 729 aaPredicted RBP14.86□□□□□ -0.03
HSPG2-206ENST00000439717 SLC51AQ86UW1 340 aa14.86□□□□□ -0.03
HSPG2-206ENST00000439717 KAZALD1Q96I82 304 aa14.86□□□□□ -0.03
HSPG2-206ENST00000439717 RCAN3Q9UKA8 241 aa14.86□□□□□ -0.03
HSPG2-206ENST00000439717 COL4A1P02462 1669 aa14.86□□□□□ -0.03
HSPG2-206ENST00000439717 YTHDC1Q96MU7 727 aaKnown RBP14.85□□□□□ -0.03
HSPG2-206ENST00000439717 BICC1Q9H694 974 aaKnown RBP14.85□□□□□ -0.03
HSPG2-206ENST00000439717 PODXL2Q9NZ53 605 aa14.85□□□□□ -0.03
HSPG2-206ENST00000439717 NSFL1CQ9UNZ2 370 aaKnown RBP14.85□□□□□ -0.03
HSPG2-206ENST00000439717 CHMP3Q9Y3E7 222 aa14.85□□□□□ -0.03
HSPG2-206ENST00000439717 DICER1Q9UPY3 1922 aaKnown RBP14.84□□□□□ -0.03
HSPG2-206ENST00000439717 UBTFL1P0CB47 393 aaPredicted RBP14.84□□□□□ -0.03
HSPG2-206ENST00000439717 GPSM2P81274 684 aa14.84□□□□□ -0.03
HSPG2-206ENST00000439717 FTSJ3Q8IY81 847 aaKnown RBP14.84□□□□□ -0.03
HSPG2-206ENST00000439717 JDP2Q8WYK2 163 aa14.84□□□□□ -0.03
HSPG2-206ENST00000439717 CLUAP1Q96AJ1 413 aa14.84□□□□□ -0.03
HSPG2-206ENST00000439717 MPHOSPH8Q99549 860 aa14.84□□□□□ -0.03
HSPG2-206ENST00000439717 CCDC88AQ3V6T2 1871 aa14.84□□□□□ -0.03
HSPG2-206ENST00000439717 GNAI3P08754 354 aa14.83□□□□□ -0.04
HSPG2-206ENST00000439717 MS4A1P11836 297 aa14.83□□□□□ -0.04
HSPG2-206ENST00000439717 DZIP1LQ8IYY4 767 aaKnown RBP14.83□□□□□ -0.04
HSPG2-206ENST00000439717 LARGE2Q8N3Y3 721 aa14.83□□□□□ -0.04
HSPG2-206ENST00000439717 ANKRD44Q8N8A2 993 aa14.83□□□□□ -0.04
HSPG2-206ENST00000439717 EYA3Q99504 573 aa14.83□□□□□ -0.04
HSPG2-206ENST00000439717 ANKIB1Q9P2G1 1089 aa14.83□□□□□ -0.04
HSPG2-206ENST00000439717 MINPP1Q9UNW1 487 aa14.83□□□□□ -0.04
HSPG2-206ENST00000439717 TNNQ9UQP3 1299 aa14.83□□□□□ -0.04
HSPG2-206ENST00000439717 XDHP47989 1333 aa14.83□□□□□ -0.04
HSPG2-206ENST00000439717 KDM2BQ8NHM5 1336 aa14.83□□□□□ -0.04
HSPG2-206ENST00000439717 TIAM2Q8IVF5 1701 aa14.83□□□□□ -0.04
HSPG2-206ENST00000439717 GLTPD2A6NH11 291 aa14.82□□□□□ -0.04
HSPG2-206ENST00000439717 PPIP5K2O43314 1243 aa14.82□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 65.9 ms