RNA–Protein interactions for RNA: ENST00000439613.2

HMGB1P37-201, Transcript of high mobility group box 1 pseudogene 37, humanhuman

BASIC

Gene HMGB1P37, Length 609 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P37-201ENST00000439613 IFNL2Q8IZJ0 200 aa5.04□□□□□ -1.6
HMGB1P37-201ENST00000439613 GNL3Q9BVP2 549 aaKnown RBP eCLIP5.04□□□□□ -1.6
HMGB1P37-201ENST00000439613 API5Q9BZZ5 524 aaKnown RBP5.04□□□□□ -1.6
HMGB1P37-201ENST00000439613 DDX19BQ9UMR2 479 aa5.04□□□□□ -1.6
HMGB1P37-201ENST00000439613 COL5A2P05997 1499 aaPredicted RBP5.04□□□□□ -1.6
HMGB1P37-201ENST00000439613 COL16A1Q07092 1604 aaPredicted RBP5.04□□□□□ -1.6
HMGB1P37-201ENST00000439613 PTPRCP08575 1304 aa5.03□□□□□ -1.6
HMGB1P37-201ENST00000439613 ADAMTS7Q9UKP4 1686 aa5.03□□□□□ -1.6
HMGB1P37-201ENST00000439613 NUTM2BA6NNL0 878 aaPredicted RBP5.03□□□□□ -1.6
HMGB1P37-201ENST00000439613 BTBD11A6QL63 1104 aa5.03□□□□□ -1.6
HMGB1P37-201ENST00000439613 NUTM2EB1AL46 878 aaPredicted RBP5.03□□□□□ -1.6
HMGB1P37-201ENST00000439613 C6orf229H3BNL8 230 aa5.03□□□□□ -1.6
HMGB1P37-201ENST00000439613 TLL1O43897 1013 aa5.03□□□□□ -1.6
HMGB1P37-201ENST00000439613 ITGBL1O95965 494 aaPredicted RBP5.03□□□□□ -1.6
HMGB1P37-201ENST00000439613 TRIM27P14373 513 aa5.03□□□□□ -1.6
HMGB1P37-201ENST00000439613 IL2RBP14784 551 aa5.03□□□□□ -1.6
HMGB1P37-201ENST00000439613 PIP4K2BP78356 416 aa5.03□□□□□ -1.6
HMGB1P37-201ENST00000439613 MTMR2Q13614 643 aa5.03□□□□□ -1.6
HMGB1P37-201ENST00000439613 CCDC30Q5VVM6 783 aa5.03□□□□□ -1.6
HMGB1P37-201ENST00000439613 MPRIPQ6WCQ1 1025 aa5.03□□□□□ -1.6
HMGB1P37-201ENST00000439613 RNF19BQ6ZMZ0 732 aa5.03□□□□□ -1.6
HMGB1P37-201ENST00000439613 NUTM2AQ8IVF1 878 aaPredicted RBP5.03□□□□□ -1.6
HMGB1P37-201ENST00000439613 TSPYL6Q8N831 410 aa5.03□□□□□ -1.6
HMGB1P37-201ENST00000439613 ZCRB1Q8TBF4 217 aaKnown RBP5.03□□□□□ -1.6
HMGB1P37-201ENST00000439613 PANK1Q8TE04 598 aa5.03□□□□□ -1.6
HMGB1P37-201ENST00000439613 TSC1Q92574 1164 aa5.03□□□□□ -1.6
HMGB1P37-201ENST00000439613 THAP11Q96EK4 314 aa5.03□□□□□ -1.6
HMGB1P37-201ENST00000439613 DCAF5Q96JK2 942 aa5.03□□□□□ -1.6
HMGB1P37-201ENST00000439613 SPSB2Q99619 263 aa5.03□□□□□ -1.6
HMGB1P37-201ENST00000439613 CDCA7Q9BWT1 371 aaPredicted RBP5.03□□□□□ -1.6
HMGB1P37-201ENST00000439613 BCL2L13Q9BXK5 485 aa5.03□□□□□ -1.6
HMGB1P37-201ENST00000439613 STK31Q9BXU1 1019 aa5.03□□□□□ -1.6
HMGB1P37-201ENST00000439613 LGR6Q9HBX8 967 aa5.03□□□□□ -1.6
HMGB1P37-201ENST00000439613 NOB1Q9ULX3 412 aaKnown RBP5.03□□□□□ -1.6
HMGB1P37-201ENST00000439613 SIPA1L3O60292 1781 aaPredicted RBP5.03□□□□□ -1.6
HMGB1P37-201ENST00000439613 KDM3BQ7LBC6 1761 aa5.03□□□□□ -1.6
HMGB1P37-201ENST00000439613 PCDH11XQ9BZA7 1347 aa5.02□□□□□ -1.61
HMGB1P37-201ENST00000439613 PCDH11YQ9BZA8 1340 aa5.02□□□□□ -1.61
HMGB1P37-201ENST00000439613 SPDYE5A6NIY4 337 aa5.02□□□□□ -1.61
HMGB1P37-201ENST00000439613 ERVV-2B6SEH9 535 aa5.02□□□□□ -1.61
HMGB1P37-201ENST00000439613 ELL2O00472 640 aaPredicted RBP5.02□□□□□ -1.61
HMGB1P37-201ENST00000439613 LILRB3O75022 631 aa5.02□□□□□ -1.61
HMGB1P37-201ENST00000439613 PHKG2P15735 406 aa5.02□□□□□ -1.61
HMGB1P37-201ENST00000439613 RFC5P40937 340 aa5.02□□□□□ -1.61
HMGB1P37-201ENST00000439613 MVPQ14764 893 aaKnown RBP5.02□□□□□ -1.61
HMGB1P37-201ENST00000439613 CENPQQ7L2Z9 268 aaPredicted RBP5.02□□□□□ -1.61
HMGB1P37-201ENST00000439613 CLUAP1Q96AJ1 413 aa5.02□□□□□ -1.61
HMGB1P37-201ENST00000439613 USB1Q9BQ65 265 aaKnown RBP5.02□□□□□ -1.61
HMGB1P37-201ENST00000439613 ZBTB3Q9H5J0 574 aa5.02□□□□□ -1.61
HMGB1P37-201ENST00000439613 STRN4Q9NRL3 753 aa5.02□□□□□ -1.61
HMGB1P37-201ENST00000439613 BTG4Q9NY30 223 aa5.02□□□□□ -1.61
HMGB1P37-201ENST00000439613 MIS18AQ9NYP9 233 aa5.02□□□□□ -1.61
HMGB1P37-201ENST00000439613 COG6Q9Y2V7 657 aa5.02□□□□□ -1.61
HMGB1P37-201ENST00000439613 MEGF6O75095 1541 aa5.02□□□□□ -1.61
HMGB1P37-201ENST00000439613 NWD2Q9ULI1 1742 aa5.01□□□□□ -1.61
HMGB1P37-201ENST00000439613 ADH1BP00325 375 aa5.01□□□□□ -1.61
HMGB1P37-201ENST00000439613 EIF4A1P60842 406 aaKnown RBP5.01□□□□□ -1.61
HMGB1P37-201ENST00000439613 PPP2R2DQ66LE6 453 aa5.01□□□□□ -1.61
HMGB1P37-201ENST00000439613 LARP1Q6PKG0 1096 aaKnown RBP5.01□□□□□ -1.61
HMGB1P37-201ENST00000439613 RETREG3Q86VR2 466 aa5.01□□□□□ -1.61
HMGB1P37-201ENST00000439613 FAM160A2Q8N612 972 aaPredicted RBP5.01□□□□□ -1.61
HMGB1P37-201ENST00000439613 NKX2-3Q8TAU0 364 aa5.01□□□□□ -1.61
HMGB1P37-201ENST00000439613 RWDD1Q9H446 243 aaPredicted RBP5.01□□□□□ -1.61
HMGB1P37-201ENST00000439613 SLC52A2Q9HAB3 445 aa5.01□□□□□ -1.61
HMGB1P37-201ENST00000439613 THRAP3Q9Y2W1 955 aaKnown RBP5.01□□□□□ -1.61
HMGB1P37-201ENST00000439613 JCADQ9P266 1359 aa5.01□□□□□ -1.61
HMGB1P37-201ENST00000439613 ABCC4O15439 1325 aa5□□□□□ -1.61
HMGB1P37-201ENST00000439613 PLCH1Q4KWH8 1693 aa5□□□□□ -1.61
HMGB1P37-201ENST00000439613 CFAP99D6REC4 459 aa5□□□□□ -1.61
HMGB1P37-201ENST00000439613 CYP27B1O15528 508 aa5□□□□□ -1.61
HMGB1P37-201ENST00000439613 AP1G2O75843 785 aa5□□□□□ -1.61
HMGB1P37-201ENST00000439613 RLBP1P12271 317 aa5□□□□□ -1.61
HMGB1P37-201ENST00000439613 CCT4P50991 539 aaKnown RBP5□□□□□ -1.61
HMGB1P37-201ENST00000439613 CABP4P57796 275 aa5□□□□□ -1.61
HMGB1P37-201ENST00000439613 IFFO2Q5TF58 517 aa5□□□□□ -1.61
HMGB1P37-201ENST00000439613 HDGFL1Q5TGJ6 251 aa5□□□□□ -1.61
HMGB1P37-201ENST00000439613 INTS3Q68E01 1043 aaKnown RBP5□□□□□ -1.61
HMGB1P37-201ENST00000439613 ITPRIPQ8IWB1 547 aa5□□□□□ -1.61
HMGB1P37-201ENST00000439613 TTC5Q8N0Z6 440 aa5□□□□□ -1.61
HMGB1P37-201ENST00000439613 TMEM57Q8N5G2 664 aa5□□□□□ -1.61
HMGB1P37-201ENST00000439613 NFATC2IPQ8NCF5 419 aa5□□□□□ -1.61
HMGB1P37-201ENST00000439613 PRDM9Q9NQV7 894 aa5□□□□□ -1.61
HMGB1P37-201ENST00000439613 PLA2G2EQ9NZK7 142 aa5□□□□□ -1.61
HMGB1P37-201ENST00000439613 HEG1Q9ULI3 1381 aa5□□□□□ -1.61
HMGB1P37-201ENST00000439613 MRC1P22897 1456 aa5□□□□□ -1.61
HMGB1P37-201ENST00000439613 KAT6BQ8WYB5 2073 aa5□□□□□ -1.61
HMGB1P37-201ENST00000439613 SPATA31A6Q5VVP1 1343 aa4.99□□□□□ -1.61
HMGB1P37-201ENST00000439613 KDM6AO15550 1401 aaPredicted RBP4.99□□□□□ -1.61
HMGB1P37-201ENST00000439613 EXOC5O00471 708 aa4.99□□□□□ -1.61
HMGB1P37-201ENST00000439613 TCERG1O14776 1098 aaKnown RBP4.99□□□□□ -1.61
HMGB1P37-201ENST00000439613 GIGYF1O75420 1035 aaPredicted RBP4.99□□□□□ -1.61
HMGB1P37-201ENST00000439613 ADAMTS2O95450 1211 aa4.99□□□□□ -1.61
HMGB1P37-201ENST00000439613 KRT24Q2M2I5 525 aa4.99□□□□□ -1.61
HMGB1P37-201ENST00000439613 MSS51Q4VC12 460 aa4.99□□□□□ -1.61
HMGB1P37-201ENST00000439613 ZNF790Q6PG37 636 aa4.99□□□□□ -1.61
HMGB1P37-201ENST00000439613 PRR7Q8TB68 274 aa4.99□□□□□ -1.61
HMGB1P37-201ENST00000439613 FMNL2Q96PY5 1086 aa4.99□□□□□ -1.61
HMGB1P37-201ENST00000439613 SLC6A16Q9GZN6 736 aa4.99□□□□□ -1.61
HMGB1P37-201ENST00000439613 SNRKQ9NRH2 765 aa4.99□□□□□ -1.61
HMGB1P37-201ENST00000439613 ZBTB40Q9NUA8 1239 aa4.99□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms