RNA–Protein interactions for RNA: ENST00000437242.1

HMGB1P31-201, Transcript of high mobility group box 1 pseudogene 31, humanhuman

BASIC

Gene HMGB1P31, Length 427 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P31-201ENST00000437242 ARID4AP29374 1257 aaPredicted RBP7.37□□□□□ -1.23
HMGB1P31-201ENST00000437242 MSL1Q68DK7 614 aa7.37□□□□□ -1.23
HMGB1P31-201ENST00000437242 DTWD1Q8N5C7 304 aa7.37□□□□□ -1.23
HMGB1P31-201ENST00000437242 TP53INP1Q96A56 240 aa7.37□□□□□ -1.23
HMGB1P31-201ENST00000437242 QTRT2Q9H974 415 aaKnown RBP7.37□□□□□ -1.23
HMGB1P31-201ENST00000437242 FRRS1LQ9P0K9 344 aa7.37□□□□□ -1.23
HMGB1P31-201ENST00000437242 MLLT1Q03111 559 aaPredicted RBP7.36□□□□□ -1.23
HMGB1P31-201ENST00000437242 ELMSAN1Q6PJG2 1045 aa7.36□□□□□ -1.23
HMGB1P31-201ENST00000437242 WFDC8Q8IUA0 241 aa7.36□□□□□ -1.23
HMGB1P31-201ENST00000437242 LPIN3Q9BQK8 851 aa7.36□□□□□ -1.23
HMGB1P31-201ENST00000437242 ZFP64Q9NPA5 681 aa7.36□□□□□ -1.23
HMGB1P31-201ENST00000437242 ZFATQ9P243 1243 aa7.36□□□□□ -1.23
HMGB1P31-201ENST00000437242 A6NJR5 290 aa7.35□□□□□ -1.23
HMGB1P31-201ENST00000437242 MICAL2O94851 1124 aa7.35□□□□□ -1.23
HMGB1P31-201ENST00000437242 WEE1P30291 646 aa7.35□□□□□ -1.23
HMGB1P31-201ENST00000437242 GPLD1P80108 840 aa7.35□□□□□ -1.23
HMGB1P31-201ENST00000437242 TMEM132AQ24JP5 1023 aa7.35□□□□□ -1.23
HMGB1P31-201ENST00000437242 C11orf91Q3C1V1 193 aa7.35□□□□□ -1.23
HMGB1P31-201ENST00000437242 PERM1Q5SV97 790 aa7.35□□□□□ -1.23
HMGB1P31-201ENST00000437242 ARTNQ5T4W7 220 aa7.35□□□□□ -1.23
HMGB1P31-201ENST00000437242 TRPM4Q8TD43 1214 aa7.35□□□□□ -1.23
HMGB1P31-201ENST00000437242 IFT43Q96FT9 208 aa7.35□□□□□ -1.23
HMGB1P31-201ENST00000437242 MYO19Q96H55 970 aa7.35□□□□□ -1.23
HMGB1P31-201ENST00000437242 ARXQ96QS3 562 aa7.35□□□□□ -1.23
HMGB1P31-201ENST00000437242 KRTAP4-8Q9BYQ9 185 aa7.35□□□□□ -1.23
HMGB1P31-201ENST00000437242 C11orf16Q9NQ32 467 aa7.35□□□□□ -1.23
HMGB1P31-201ENST00000437242 UTP3Q9NQZ2 479 aaKnown RBP eCLIP7.35□□□□□ -1.23
HMGB1P31-201ENST00000437242 SASH3O75995 380 aa7.34□□□□□ -1.23
HMGB1P31-201ENST00000437242 TARSP26639 723 aaKnown RBP7.34□□□□□ -1.23
HMGB1P31-201ENST00000437242 GRIK5Q16478 980 aa7.34□□□□□ -1.23
HMGB1P31-201ENST00000437242 PSMG3-AS1Q96PY0 264 aa7.34□□□□□ -1.23
HMGB1P31-201ENST00000437242 ZBTB42B2RXF5 422 aa7.33□□□□□ -1.24
HMGB1P31-201ENST00000437242 EIF2AK2P19525 551 aaKnown RBP7.33□□□□□ -1.24
HMGB1P31-201ENST00000437242 ILDR2Q71H61 639 aa7.33□□□□□ -1.24
HMGB1P31-201ENST00000437242 NBPF11Q86T75 865 aa7.33□□□□□ -1.24
HMGB1P31-201ENST00000437242 FBXO11Q86XK2 927 aa7.33□□□□□ -1.24
HMGB1P31-201ENST00000437242 FAM200AQ8TCP9 573 aa7.33□□□□□ -1.24
HMGB1P31-201ENST00000437242 SMG9Q9H0W8 520 aaKnown RBP7.33□□□□□ -1.24
HMGB1P31-201ENST00000437242 NRLP54845 237 aa7.32□□□□□ -1.24
HMGB1P31-201ENST00000437242 PLAURQ03405 335 aa7.32□□□□□ -1.24
HMGB1P31-201ENST00000437242 TTC9Q92623 222 aa7.32□□□□□ -1.24
HMGB1P31-201ENST00000437242 SSBP4Q9BWG4 385 aaPredicted RBP7.32□□□□□ -1.24
HMGB1P31-201ENST00000437242 RTCBQ9Y3I0 505 aaKnown RBP7.32□□□□□ -1.24
HMGB1P31-201ENST00000437242 LRP8Q14114 963 aa7.31□□□□□ -1.24
HMGB1P31-201ENST00000437242 HFE2Q6ZVN8 426 aa7.31□□□□□ -1.24
HMGB1P31-201ENST00000437242 RGL4Q8IZJ4 473 aa7.31□□□□□ -1.24
HMGB1P31-201ENST00000437242 WFDC12Q8WWY7 111 aa7.31□□□□□ -1.24
HMGB1P31-201ENST00000437242 USP20Q9Y2K6 914 aa7.31□□□□□ -1.24
HMGB1P31-201ENST00000437242 XYLBO75191 536 aa7.3□□□□□ -1.24
HMGB1P31-201ENST00000437242 PSAPP07602 524 aa7.3□□□□□ -1.24
HMGB1P31-201ENST00000437242 RFX1P22670 979 aa7.3□□□□□ -1.24
HMGB1P31-201ENST00000437242 IREB2P48200 963 aaKnown RBP7.3□□□□□ -1.24
HMGB1P31-201ENST00000437242 CFAP70Q5T0N1 1121 aa7.3□□□□□ -1.24
HMGB1P31-201ENST00000437242 IGF2-ASQ6U949 168 aa7.3□□□□□ -1.24
HMGB1P31-201ENST00000437242 TREML1Q86YW5 311 aa7.3□□□□□ -1.24
HMGB1P31-201ENST00000437242 CMTR1Q8N1G2 835 aaKnown RBP7.3□□□□□ -1.24
HMGB1P31-201ENST00000437242 TLR7Q9NYK1 1049 aaKnown RBP7.3□□□□□ -1.24
HMGB1P31-201ENST00000437242 OPLAHO14841 1288 aa7.29□□□□□ -1.24
HMGB1P31-201ENST00000437242 EGFRP00533 1210 aa7.29□□□□□ -1.24
HMGB1P31-201ENST00000437242 NOS3P29474 1203 aa7.29□□□□□ -1.24
HMGB1P31-201ENST00000437242 LRFN2Q9ULH4 789 aa7.29□□□□□ -1.24
HMGB1P31-201ENST00000437242 GHRHP01286 108 aa7.28□□□□□ -1.24
HMGB1P31-201ENST00000437242 FKBP5Q13451 457 aaPredicted RBP7.28□□□□□ -1.24
HMGB1P31-201ENST00000437242 CDCA8Q53HL2 280 aa7.28□□□□□ -1.24
HMGB1P31-201ENST00000437242 PLD4Q96BZ4 506 aa7.28□□□□□ -1.24
HMGB1P31-201ENST00000437242 RBSNQ9H1K0 784 aa7.28□□□□□ -1.24
HMGB1P31-201ENST00000437242 NOVA2Q9UNW9 492 aaKnown RBP7.28□□□□□ -1.24
HMGB1P31-201ENST00000437242 DEAF1O75398 565 aaPredicted RBP7.27□□□□□ -1.25
HMGB1P31-201ENST00000437242 GDF6Q6KF10 455 aaPredicted RBP7.27□□□□□ -1.25
HMGB1P31-201ENST00000437242 MEGF10Q96KG7 1140 aa7.27□□□□□ -1.25
HMGB1P31-201ENST00000437242 NSUN5Q96P11 429 aaKnown RBP7.27□□□□□ -1.25
HMGB1P31-201ENST00000437242 LOC102724428A0A0B4J2F2 783 aa7.26□□□□□ -1.25
HMGB1P31-201ENST00000437242 J3QW42 95 aa7.26□□□□□ -1.25
HMGB1P31-201ENST00000437242 DLL1O00548 723 aa7.26□□□□□ -1.25
HMGB1P31-201ENST00000437242 MMP20O60882 483 aa7.26□□□□□ -1.25
HMGB1P31-201ENST00000437242 SIK1P57059 783 aa7.26□□□□□ -1.25
HMGB1P31-201ENST00000437242 SWI5Q1ZZU3 235 aa7.26□□□□□ -1.25
HMGB1P31-201ENST00000437242 COX20Q5RI15 118 aa7.26□□□□□ -1.25
HMGB1P31-201ENST00000437242 PRIMPOLQ96LW4 560 aa7.26□□□□□ -1.25
HMGB1P31-201ENST00000437242 KCNMB2Q9Y691 235 aa7.26□□□□□ -1.25
HMGB1P31-201ENST00000437242 PRMT3O60678 531 aa7.25□□□□□ -1.25
HMGB1P31-201ENST00000437242 SOX18P35713 384 aa7.25□□□□□ -1.25
HMGB1P31-201ENST00000437242 DCAF11Q8TEB1 546 aa7.25□□□□□ -1.25
HMGB1P31-201ENST00000437242 MRPL18Q9H0U6 180 aaKnown RBP7.25□□□□□ -1.25
HMGB1P31-201ENST00000437242 AKTIPQ9H8T0 292 aa7.25□□□□□ -1.25
HMGB1P31-201ENST00000437242 SRA1Q9HD15 236 aaKnown RBP7.25□□□□□ -1.25
HMGB1P31-201ENST00000437242 ZNF777Q9ULD5 760 aaPredicted RBP7.25□□□□□ -1.25
HMGB1P31-201ENST00000437242 ACIN1Q9UKV3 1341 aaKnown RBP7.25□□□□□ -1.25
HMGB1P31-201ENST00000437242 HOXD8P13378 290 aaPredicted RBP7.24□□□□□ -1.25
HMGB1P31-201ENST00000437242 IL22RA1Q8N6P7 574 aa7.24□□□□□ -1.25
HMGB1P31-201ENST00000437242 HYAL3O43820 417 aaPredicted RBP7.23□□□□□ -1.25
HMGB1P31-201ENST00000437242 BRD2P25440 801 aaKnown RBP7.23□□□□□ -1.25
HMGB1P31-201ENST00000437242 C16orf46Q6P387 395 aa7.23□□□□□ -1.25
HMGB1P31-201ENST00000437242 PRR23CQ6ZRP0 262 aa7.23□□□□□ -1.25
HMGB1P31-201ENST00000437242 NLRP13Q86W25 1043 aa7.23□□□□□ -1.25
HMGB1P31-201ENST00000437242 MAP4K3Q8IVH8 894 aa7.23□□□□□ -1.25
HMGB1P31-201ENST00000437242 ETFBKMTQ8IXQ9 262 aa7.23□□□□□ -1.25
HMGB1P31-201ENST00000437242 TRIP4Q15650 581 aaPredicted RBP7.22□□□□□ -1.25
HMGB1P31-201ENST00000437242 FAM13BQ9NYF5 915 aa7.22□□□□□ -1.25
HMGB1P31-201ENST00000437242 RNF112Q9ULX5 631 aa7.22□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms