RNA–Protein interactions for RNA: ENST00000436638.5

ECHDC1-208, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

APPRIS ALT2 TSL 3

Gene ECHDC1, Length 766 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-208ENST00000436638 NBPF6Q5VWK0 638 aa8.12□□□□□ -1.11
ECHDC1-208ENST00000436638 USHBP1Q8N6Y0 703 aa8.12□□□□□ -1.11
ECHDC1-208ENST00000436638 HELBQ8NG08 1087 aaPredicted RBP8.12□□□□□ -1.11
ECHDC1-208ENST00000436638 NBPF4Q96M43 638 aa8.12□□□□□ -1.11
ECHDC1-208ENST00000436638 PNNQ9H307 717 aaKnown RBP8.12□□□□□ -1.11
ECHDC1-208ENST00000436638 NRAPQ86VF7 1730 aa8.12□□□□□ -1.11
ECHDC1-208ENST00000436638 EXOC5O00471 708 aa8.11□□□□□ -1.11
ECHDC1-208ENST00000436638 HMOX1P09601 288 aa8.11□□□□□ -1.11
ECHDC1-208ENST00000436638 KCNH2Q12809 1159 aa8.11□□□□□ -1.11
ECHDC1-208ENST00000436638 LAPTM4AQ15012 233 aa8.11□□□□□ -1.11
ECHDC1-208ENST00000436638 SULT6B1Q6IMI4 303 aa8.11□□□□□ -1.11
ECHDC1-208ENST00000436638 POTEAQ6S8J7 498 aa8.11□□□□□ -1.11
ECHDC1-208ENST00000436638 GNL3Q9BVP2 549 aaKnown RBP eCLIP8.11□□□□□ -1.11
ECHDC1-208ENST00000436638 RGS17Q9UGC6 210 aaPredicted RBP8.11□□□□□ -1.11
ECHDC1-208ENST00000436638 FAM208AQ9UK61 1670 aaKnown RBP8.11□□□□□ -1.11
ECHDC1-208ENST00000436638 IGSF1Q8N6C5 1336 aa8.1□□□□□ -1.11
ECHDC1-208ENST00000436638 CCER2I3L3R5 266 aa8.1□□□□□ -1.11
ECHDC1-208ENST00000436638 PDE3BQ13370 1112 aa8.1□□□□□ -1.11
ECHDC1-208ENST00000436638 DDB1Q16531 1140 aa8.1□□□□□ -1.11
ECHDC1-208ENST00000436638 TRIM67Q6ZTA4 783 aa8.1□□□□□ -1.11
ECHDC1-208ENST00000436638 UNC93B1Q9H1C4 597 aa8.1□□□□□ -1.11
ECHDC1-208ENST00000436638 COL3A1P02461 1466 aaPredicted RBP8.09□□□□□ -1.11
ECHDC1-208ENST00000436638 PLEKHO1Q53GL0 409 aaPredicted RBP8.09□□□□□ -1.11
ECHDC1-208ENST00000436638 Q6ZNB5 142 aa8.09□□□□□ -1.11
ECHDC1-208ENST00000436638 SEPT12Q8IYM1 358 aa8.09□□□□□ -1.11
ECHDC1-208ENST00000436638 GOPCQ9HD26 462 aa8.09□□□□□ -1.11
ECHDC1-208ENST00000436638 SPG7Q9UQ90 795 aa8.09□□□□□ -1.11
ECHDC1-208ENST00000436638 MAPK8IP3Q9UPT6 1336 aa8.08□□□□□ -1.12
ECHDC1-208ENST00000436638 NRG2O14511 850 aaPredicted RBP8.08□□□□□ -1.12
ECHDC1-208ENST00000436638 GDF9O60383 454 aa8.08□□□□□ -1.12
ECHDC1-208ENST00000436638 AP1G2O75843 785 aa8.08□□□□□ -1.12
ECHDC1-208ENST00000436638 PRKAR2BP31323 418 aa8.08□□□□□ -1.12
ECHDC1-208ENST00000436638 CTDSPL2Q05D32 466 aa8.08□□□□□ -1.12
ECHDC1-208ENST00000436638 AMOTQ4VCS5 1084 aa8.08□□□□□ -1.12
ECHDC1-208ENST00000436638 AEBP1Q8IUX7 1158 aa8.08□□□□□ -1.12
ECHDC1-208ENST00000436638 ZCRB1Q8TBF4 217 aaKnown RBP8.08□□□□□ -1.12
ECHDC1-208ENST00000436638 PKD2L1Q9P0L9 805 aa8.08□□□□□ -1.12
ECHDC1-208ENST00000436638 MAP10Q9P2G4 905 aa8.08□□□□□ -1.12
ECHDC1-208ENST00000436638 GLI3P10071 1580 aa8.07□□□□□ -1.12
ECHDC1-208ENST00000436638 CCDC184Q52MB2 194 aa8.07□□□□□ -1.12
ECHDC1-208ENST00000436638 C1orf141Q5JVX7 400 aa8.07□□□□□ -1.12
ECHDC1-208ENST00000436638 PPP2R2DQ66LE6 453 aa8.07□□□□□ -1.12
ECHDC1-208ENST00000436638 TICAM2Q86XR7 235 aa8.07□□□□□ -1.12
ECHDC1-208ENST00000436638 FAM9BQ8IZU0 186 aa8.07□□□□□ -1.12
ECHDC1-208ENST00000436638 GAS2L2Q8NHY3 880 aa8.07□□□□□ -1.12
ECHDC1-208ENST00000436638 DDX54Q8TDD1 881 aaKnown RBP8.07□□□□□ -1.12
ECHDC1-208ENST00000436638 BAP1Q92560 729 aa8.07□□□□□ -1.12
ECHDC1-208ENST00000436638 NAP1L5Q96NT1 182 aaPredicted RBP8.07□□□□□ -1.12
ECHDC1-208ENST00000436638 CLSTN1O94985 981 aa8.06□□□□□ -1.12
ECHDC1-208ENST00000436638 SKOR1P84550 965 aa8.06□□□□□ -1.12
ECHDC1-208ENST00000436638 PRR20EP86478 221 aa8.06□□□□□ -1.12
ECHDC1-208ENST00000436638 PRR20CP86479 221 aa8.06□□□□□ -1.12
ECHDC1-208ENST00000436638 PRR20DP86480 221 aa8.06□□□□□ -1.12
ECHDC1-208ENST00000436638 PRR20BP86481 221 aa8.06□□□□□ -1.12
ECHDC1-208ENST00000436638 PRR20AP86496 221 aa8.06□□□□□ -1.12
ECHDC1-208ENST00000436638 LINC01559Q495D7 138 aa8.06□□□□□ -1.12
ECHDC1-208ENST00000436638 ERICH6BQ5W0A0 696 aa8.06□□□□□ -1.12
ECHDC1-208ENST00000436638 ZNF530Q6P9A1 599 aaPredicted RBP8.06□□□□□ -1.12
ECHDC1-208ENST00000436638 KRT27Q7Z3Y8 459 aa8.06□□□□□ -1.12
ECHDC1-208ENST00000436638 CCDC136Q96JN2 1154 aa8.06□□□□□ -1.12
ECHDC1-208ENST00000436638 ARID3AQ99856 593 aa8.06□□□□□ -1.12
ECHDC1-208ENST00000436638 ADAMTS8Q9UP79 889 aa8.06□□□□□ -1.12
ECHDC1-208ENST00000436638 RGPD2P0DJD1 1756 aa8.06□□□□□ -1.12
ECHDC1-208ENST00000436638 PCDH11XQ9BZA7 1347 aa8.05□□□□□ -1.12
ECHDC1-208ENST00000436638 PCDH11YQ9BZA8 1340 aa8.05□□□□□ -1.12
ECHDC1-208ENST00000436638 OVOS2A0A0G2JMS6 1433 aa8.05□□□□□ -1.12
ECHDC1-208ENST00000436638 DISP2A7MBM2 1401 aa8.05□□□□□ -1.12
ECHDC1-208ENST00000436638 NCAPD2Q15021 1401 aa8.05□□□□□ -1.12
ECHDC1-208ENST00000436638 MEGF6O75095 1541 aa8.05□□□□□ -1.12
ECHDC1-208ENST00000436638 F12P00748 615 aaPredicted RBP8.05□□□□□ -1.12
ECHDC1-208ENST00000436638 HSP90AB1P08238 724 aaKnown RBP8.05□□□□□ -1.12
ECHDC1-208ENST00000436638 RFC5P40937 340 aa8.05□□□□□ -1.12
ECHDC1-208ENST00000436638 WNT7BP56706 349 aa8.05□□□□□ -1.12
ECHDC1-208ENST00000436638 RC3H1Q5TC82 1133 aaKnown RBP8.05□□□□□ -1.12
ECHDC1-208ENST00000436638 IFNL2Q8IZJ0 200 aa8.05□□□□□ -1.12
ECHDC1-208ENST00000436638 CYP4X1Q8N118 509 aa8.05□□□□□ -1.12
ECHDC1-208ENST00000436638 PNISRQ8TF01 805 aaKnown RBP8.05□□□□□ -1.12
ECHDC1-208ENST00000436638 RUNDC1Q96C34 613 aa8.05□□□□□ -1.12
ECHDC1-208ENST00000436638 PARP4Q9UKK3 1724 aaKnown RBP8.05□□□□□ -1.12
ECHDC1-208ENST00000436638 KDRP35968 1356 aa8.05□□□□□ -1.12
ECHDC1-208ENST00000436638 PLEKHG2Q9H7P9 1386 aa8.05□□□□□ -1.12
ECHDC1-208ENST00000436638 RGS12O14924 1447 aa8.04□□□□□ -1.12
ECHDC1-208ENST00000436638 TNS2Q63HR2 1409 aa8.04□□□□□ -1.12
ECHDC1-208ENST00000436638 TTC24A2A3L6 582 aaPredicted RBP8.04□□□□□ -1.12
ECHDC1-208ENST00000436638 WNT7AO00755 349 aa8.04□□□□□ -1.12
ECHDC1-208ENST00000436638 SH3BP2P78314 561 aa8.04□□□□□ -1.12
ECHDC1-208ENST00000436638 AAMPQ13685 434 aa8.04□□□□□ -1.12
ECHDC1-208ENST00000436638 CCDC146Q8IYE0 955 aa8.04□□□□□ -1.12
ECHDC1-208ENST00000436638 LRRN4Q8WUT4 740 aa8.04□□□□□ -1.12
ECHDC1-208ENST00000436638 RTF1Q92541 710 aaKnown RBP8.04□□□□□ -1.12
ECHDC1-208ENST00000436638 MRGPRX2Q96LB1 330 aa8.04□□□□□ -1.12
ECHDC1-208ENST00000436638 RGPD1P0DJD0 1748 aa8.03□□□□□ -1.12
ECHDC1-208ENST00000436638 LMOD3Q0VAK6 560 aa8.03□□□□□ -1.12
ECHDC1-208ENST00000436638 MTHFSDQ2M296 383 aaKnown RBP8.03□□□□□ -1.12
ECHDC1-208ENST00000436638 PKDCCQ504Y2 493 aa8.03□□□□□ -1.12
ECHDC1-208ENST00000436638 AKAP4Q5JQC9 854 aa8.03□□□□□ -1.12
ECHDC1-208ENST00000436638 FAM196AQ6ZSG2 479 aa8.03□□□□□ -1.12
ECHDC1-208ENST00000436638 EHBP1Q8NDI1 1231 aa8.03□□□□□ -1.12
ECHDC1-208ENST00000436638 GTF3C5Q9Y5Q8 519 aaPredicted RBP8.03□□□□□ -1.12
ECHDC1-208ENST00000436638 WNK3Q9BYP7 1800 aa8.03□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 79.8 ms