RNA–Protein interactions for RNA: ENST00000434813.3

CLK1-205, Transcript of CDC like kinase 1, humanhuman

TSL 2 BASIC

Gene CLK1, Length 2,026 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-205ENST00000434813 PSMA5P28066 241 aa22.26■■□□□ 1.15
CLK1-205ENST00000434813 TFCP2Q12800 502 aa22.26■■□□□ 1.15
CLK1-205ENST00000434813 RNF20Q5VTR2 975 aa22.26■■□□□ 1.15
CLK1-205ENST00000434813 DDX54Q8TDD1 881 aaKnown RBP22.26■■□□□ 1.15
CLK1-205ENST00000434813 JARID2Q92833 1246 aaPredicted RBP22.26■■□□□ 1.15
CLK1-205ENST00000434813 LARP6Q9BRS8 491 aaKnown RBP22.26■■□□□ 1.15
CLK1-205ENST00000434813 COL14A1Q05707 1796 aaKnown RBP22.26■■□□□ 1.15
CLK1-205ENST00000434813 NBPF26B4DH59 902 aa22.26■■□□□ 1.15
CLK1-205ENST00000434813 ERVV-2B6SEH9 535 aa22.26■■□□□ 1.15
CLK1-205ENST00000434813 NBPF14Q5TI25 921 aa22.26■■□□□ 1.15
CLK1-205ENST00000434813 NBPF10Q6P3W6 841 aaKnown RBP22.26■■□□□ 1.15
CLK1-205ENST00000434813 NBPF15Q8N660 670 aa22.26■■□□□ 1.15
CLK1-205ENST00000434813 USP48Q86UV5 1035 aa22.25■■□□□ 1.15
CLK1-205ENST00000434813 CCDC83Q8IWF9 413 aa22.25■■□□□ 1.15
CLK1-205ENST00000434813 PHLPP1O60346 1717 aa22.25■■□□□ 1.15
CLK1-205ENST00000434813 TNS2Q63HR2 1409 aa22.25■■□□□ 1.15
CLK1-205ENST00000434813 F13A1P00488 732 aa22.24■■□□□ 1.15
CLK1-205ENST00000434813 NKX1-1Q15270 411 aaPredicted RBP22.24■■□□□ 1.15
CLK1-205ENST00000434813 HMG20BQ9P0W2 317 aa22.24■■□□□ 1.15
CLK1-205ENST00000434813 ST3GAL1Q11201 340 aa22.24■■□□□ 1.15
CLK1-205ENST00000434813 GDPD2Q9HCC8 539 aa22.24■■□□□ 1.15
CLK1-205ENST00000434813 ATP6V1DQ9Y5K8 247 aa22.24■■□□□ 1.15
CLK1-205ENST00000434813 H7C1W4 665 aa22.23■■□□□ 1.15
CLK1-205ENST00000434813 GJB2P29033 226 aa22.23■■□□□ 1.15
CLK1-205ENST00000434813 ZNF589Q86UQ0 364 aaPredicted RBP22.23■■□□□ 1.15
CLK1-205ENST00000434813 TCHHQ07283 1943 aa22.23■■□□□ 1.15
CLK1-205ENST00000434813 GADD45BO75293 160 aaPredicted RBP22.23■■□□□ 1.15
CLK1-205ENST00000434813 TSGA10IPQ3SY00 556 aa22.23■■□□□ 1.15
CLK1-205ENST00000434813 FOXD4L6Q3SYB3 417 aaPredicted RBP22.23■■□□□ 1.15
CLK1-205ENST00000434813 FOXD4L3Q6VB84 417 aaPredicted RBP22.23■■□□□ 1.15
CLK1-205ENST00000434813 ALDH8A1Q9H2A2 487 aaPredicted RBP22.23■■□□□ 1.15
CLK1-205ENST00000434813 PHF14O94880 888 aa22.22■■□□□ 1.15
CLK1-205ENST00000434813 FOXO4P98177 505 aa22.22■■□□□ 1.15
CLK1-205ENST00000434813 ME3Q16798 604 aa22.22■■□□□ 1.15
CLK1-205ENST00000434813 PDLIM2Q96JY6 352 aa22.22■■□□□ 1.15
CLK1-205ENST00000434813 ANKRD1Q15327 319 aa22.21■■□□□ 1.15
CLK1-205ENST00000434813 USPL1Q5W0Q7 1092 aa22.21■■□□□ 1.15
CLK1-205ENST00000434813 LMBR1LQ6UX01 489 aa22.21■■□□□ 1.15
CLK1-205ENST00000434813 EDC3Q96F86 508 aaKnown RBP22.21■■□□□ 1.15
CLK1-205ENST00000434813 TAF5LO75529 589 aa22.21■■□□□ 1.15
CLK1-205ENST00000434813 BLOC1S2Q6QNY1 142 aa22.21■■□□□ 1.15
CLK1-205ENST00000434813 HAUS7Q99871 368 aa22.21■■□□□ 1.15
CLK1-205ENST00000434813 DBNDD2Q9BQY9 259 aa22.21■■□□□ 1.15
CLK1-205ENST00000434813 CWC25Q9NXE8 425 aaPredicted RBP22.21■■□□□ 1.15
CLK1-205ENST00000434813 MTMR6Q9Y217 621 aa22.21■■□□□ 1.15
CLK1-205ENST00000434813 CNPY2Q9Y2B0 182 aa22.21■■□□□ 1.15
CLK1-205ENST00000434813 RPS6KB1P23443 525 aa22.2■■□□□ 1.14
CLK1-205ENST00000434813 ILDR1Q86SU0 546 aaPredicted RBP22.2■■□□□ 1.14
CLK1-205ENST00000434813 TPCN1Q9ULQ1 816 aa22.2■■□□□ 1.14
CLK1-205ENST00000434813 COL16A1Q07092 1604 aaPredicted RBP22.2■■□□□ 1.14
CLK1-205ENST00000434813 ZNF609O15014 1411 aa22.2■■□□□ 1.14
CLK1-205ENST00000434813 TTLL7Q6ZT98 887 aa22.19■■□□□ 1.14
CLK1-205ENST00000434813 PDIA4P13667 645 aaKnown RBP22.19■■□□□ 1.14
CLK1-205ENST00000434813 HS1BP3Q53T59 392 aa22.19■■□□□ 1.14
CLK1-205ENST00000434813 TOGARAM1Q9Y4F4 1720 aa22.18■■□□□ 1.14
CLK1-205ENST00000434813 ADAMTS2O95450 1211 aa22.18■■□□□ 1.14
CLK1-205ENST00000434813 TSPY26PQ9H489 355 aa22.18■■□□□ 1.14
CLK1-205ENST00000434813 GPR108Q9NPR9 543 aa22.18■■□□□ 1.14
CLK1-205ENST00000434813 UBE2HP62256 183 aa22.18■■□□□ 1.14
CLK1-205ENST00000434813 KRT32Q14532 448 aa22.18■■□□□ 1.14
CLK1-205ENST00000434813 TAF6LQ9Y6J9 622 aa22.18■■□□□ 1.14
CLK1-205ENST00000434813 COL9A3Q14050 684 aaPredicted RBP22.17■■□□□ 1.14
CLK1-205ENST00000434813 CCDC191Q8NCU4 936 aa22.17■■□□□ 1.14
CLK1-205ENST00000434813 PALLDQ8WX93 1383 aa22.17■■□□□ 1.14
CLK1-205ENST00000434813 CSPP1Q1MSJ5 1256 aa22.16■■□□□ 1.14
CLK1-205ENST00000434813 ATG9AQ7Z3C6 839 aa22.16■■□□□ 1.14
CLK1-205ENST00000434813 ZSCAN30Q86W11 494 aa22.16■■□□□ 1.14
CLK1-205ENST00000434813 NECAB1Q8N987 351 aa22.16■■□□□ 1.14
CLK1-205ENST00000434813 DNAJC2Q99543 621 aaKnown RBP22.16■■□□□ 1.14
CLK1-205ENST00000434813 A1BGP04217 495 aa22.16■■□□□ 1.14
CLK1-205ENST00000434813 TICAM2Q86XR7 235 aa22.16■■□□□ 1.14
CLK1-205ENST00000434813 SH3TC1Q8TE82 1336 aa22.16■■□□□ 1.14
CLK1-205ENST00000434813 TOB2Q14106 344 aaPredicted RBP22.15■■□□□ 1.14
CLK1-205ENST00000434813 CCDC183Q5T5S1 534 aa22.15■■□□□ 1.14
CLK1-205ENST00000434813 ANO8Q9HCE9 1232 aaPredicted RBP22.15■■□□□ 1.14
CLK1-205ENST00000434813 CHMP3Q9Y3E7 222 aa22.15■■□□□ 1.14
CLK1-205ENST00000434813 U3KPZ7 1027 aaPredicted RBP22.15■■□□□ 1.14
CLK1-205ENST00000434813 IL15P40933 162 aaPredicted RBP22.14■■□□□ 1.14
CLK1-205ENST00000434813 KBTBD3Q8NAB2 608 aa22.14■■□□□ 1.14
CLK1-205ENST00000434813 ZBTB4Q9P1Z0 1013 aaPredicted RBP22.14■■□□□ 1.14
CLK1-205ENST00000434813 SPEF2Q9C093 1822 aa22.14■■□□□ 1.14
CLK1-205ENST00000434813 NUTM2BA6NNL0 878 aaPredicted RBP22.14■■□□□ 1.13
CLK1-205ENST00000434813 NUTM2EB1AL46 878 aaPredicted RBP22.14■■□□□ 1.13
CLK1-205ENST00000434813 MCMDC2Q4G0Z9 681 aa22.14■■□□□ 1.13
CLK1-205ENST00000434813 NUTM2AQ8IVF1 878 aaPredicted RBP22.14■■□□□ 1.13
CLK1-205ENST00000434813 KLHL34Q8N239 644 aa22.14■■□□□ 1.13
CLK1-205ENST00000434813 TMOD3Q9NYL9 352 aa22.14■■□□□ 1.13
CLK1-205ENST00000434813 NDUFB9Q9Y6M9 179 aa22.14■■□□□ 1.13
CLK1-205ENST00000434813 FIBPO43427 364 aa22.13■■□□□ 1.13
CLK1-205ENST00000434813 PDCP20941 246 aa22.13■■□□□ 1.13
CLK1-205ENST00000434813 ZBTB3Q9H5J0 574 aa22.13■■□□□ 1.13
CLK1-205ENST00000434813 ATG3Q9NT62 314 aa22.13■■□□□ 1.13
CLK1-205ENST00000434813 DDX46Q7L014 1031 aaKnown RBP22.13■■□□□ 1.13
CLK1-205ENST00000434813 DISP2A7MBM2 1401 aa22.12■■□□□ 1.13
CLK1-205ENST00000434813 VPS37CA5D8V6 355 aaPredicted RBP22.12■■□□□ 1.13
CLK1-205ENST00000434813 CIAO1O76071 339 aa22.12■■□□□ 1.13
CLK1-205ENST00000434813 LETM1O95202 739 aaPredicted RBP22.12■■□□□ 1.13
CLK1-205ENST00000434813 TCEANC2Q96MN5 208 aa22.12■■□□□ 1.13
CLK1-205ENST00000434813 EXOC5O00471 708 aa22.11■■□□□ 1.13
CLK1-205ENST00000434813 DNM1Q05193 864 aaKnown RBP22.11■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms