RNA–Protein interactions for RNA: ENST00000434436.7

MBD3-202, Transcript of methyl-CpG binding domain protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MBD3, Length 2,439 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3-202ENST00000434436 MRE11P49959 708 aa28.55■■■□□ 2.16
MBD3-202ENST00000434436 TRIM28Q13263 835 aaKnown RBP28.55■■■□□ 2.16
MBD3-202ENST00000434436 DNAJC2Q99543 621 aaKnown RBP28.55■■■□□ 2.16
MBD3-202ENST00000434436 GPR108Q9NPR9 543 aa28.55■■■□□ 2.16
MBD3-202ENST00000434436 EYA2O00167 538 aa28.55■■■□□ 2.16
MBD3-202ENST00000434436 STARD3NLO95772 234 aa28.55■■■□□ 2.16
MBD3-202ENST00000434436 SLC4A9Q96Q91 983 aa28.55■■■□□ 2.16
MBD3-202ENST00000434436 CYP46A1Q9Y6A2 500 aa28.55■■■□□ 2.16
MBD3-202ENST00000434436 LRP6O75581 1613 aa28.55■■■□□ 2.16
MBD3-202ENST00000434436 LARGE1O95461 756 aa28.54■■■□□ 2.16
MBD3-202ENST00000434436 PANK2Q9BZ23 570 aa28.54■■■□□ 2.16
MBD3-202ENST00000434436 WNK3Q9BYP7 1800 aa28.54■■■□□ 2.16
MBD3-202ENST00000434436 RFX7Q2KHR2 1363 aa28.54■■■□□ 2.16
MBD3-202ENST00000434436 RPAP1Q9BWH6 1393 aaPredicted RBP28.54■■■□□ 2.16
MBD3-202ENST00000434436 KIF6Q6ZMV9 814 aa28.54■■■□□ 2.16
MBD3-202ENST00000434436 GRPEL1Q9HAV7 217 aa28.54■■■□□ 2.16
MBD3-202ENST00000434436 TAF5LO75529 589 aa28.53■■■□□ 2.16
MBD3-202ENST00000434436 CHGBP05060 677 aa28.53■■■□□ 2.16
MBD3-202ENST00000434436 TIMM10P62072 90 aa28.53■■■□□ 2.16
MBD3-202ENST00000434436 NEUROD6Q96NK8 337 aa28.53■■■□□ 2.16
MBD3-202ENST00000434436 CCDC9Q9Y3X0 531 aaKnown RBP28.53■■■□□ 2.16
MBD3-202ENST00000434436 COL9A3Q14050 684 aaPredicted RBP28.52■■■□□ 2.16
MBD3-202ENST00000434436 PUS3Q9BZE2 481 aaKnown RBP28.52■■■□□ 2.16
MBD3-202ENST00000434436 ZNF609O15014 1411 aa28.52■■■□□ 2.16
MBD3-202ENST00000434436 CIAO1O76071 339 aa28.52■■■□□ 2.16
MBD3-202ENST00000434436 EXOC5O00471 708 aa28.51■■■□□ 2.15
MBD3-202ENST00000434436 TAF6LQ9Y6J9 622 aa28.51■■■□□ 2.15
MBD3-202ENST00000434436 MAP3K15Q6ZN16 1313 aa28.51■■■□□ 2.15
MBD3-202ENST00000434436 PCCAP05165 728 aaPredicted RBP28.51■■■□□ 2.15
MBD3-202ENST00000434436 DDX46Q7L014 1031 aaKnown RBP28.51■■■□□ 2.15
MBD3-202ENST00000434436 GPT2Q8TD30 523 aa28.5■■■□□ 2.15
MBD3-202ENST00000434436 CYP19A1P11511 503 aaPredicted RBP28.5■■■□□ 2.15
MBD3-202ENST00000434436 FAM89AQ96GI7 184 aa28.5■■■□□ 2.15
MBD3-202ENST00000434436 HLFQ16534 295 aa28.49■■■□□ 2.15
MBD3-202ENST00000434436 GIGYF2Q6Y7W6 1299 aaKnown RBP28.49■■■□□ 2.15
MBD3-202ENST00000434436 KBTBD3Q8NAB2 608 aa28.49■■■□□ 2.15
MBD3-202ENST00000434436 SEC62Q99442 399 aaKnown RBP28.49■■■□□ 2.15
MBD3-202ENST00000434436 ZSCAN21Q9Y5A6 473 aaPredicted RBP28.49■■■□□ 2.15
MBD3-202ENST00000434436 WDR33Q9C0J8 1336 aaKnown RBP28.48■■■□□ 2.15
MBD3-202ENST00000434436 NCLP19338 710 aaKnown RBP28.48■■■□□ 2.15
MBD3-202ENST00000434436 RNF20Q5VTR2 975 aa28.48■■■□□ 2.15
MBD3-202ENST00000434436 USPL1Q5W0Q7 1092 aa28.48■■■□□ 2.15
MBD3-202ENST00000434436 PLA2G12BQ9BX93 195 aa28.48■■■□□ 2.15
MBD3-202ENST00000434436 CAVIN1Q6NZI2 390 aaKnown RBP28.48■■■□□ 2.15
MBD3-202ENST00000434436 ZBTB38Q8NAP3 1195 aaPredicted RBP28.48■■■□□ 2.15
MBD3-202ENST00000434436 ZSCAN31Q96LW9 406 aaPredicted RBP28.48■■■□□ 2.15
MBD3-202ENST00000434436 PSMA5P28066 241 aa28.47■■■□□ 2.15
MBD3-202ENST00000434436 CCDC129Q6ZRS4 1044 aa28.47■■■□□ 2.15
MBD3-202ENST00000434436 A0A1B0GUL7 405 aa28.47■■■□□ 2.15
MBD3-202ENST00000434436 ST3GAL1Q11201 340 aa28.47■■■□□ 2.15
MBD3-202ENST00000434436 CCDC57Q2TAC2 916 aa28.47■■■□□ 2.15
MBD3-202ENST00000434436 TSGA10IPQ3SY00 556 aa28.47■■■□□ 2.15
MBD3-202ENST00000434436 RTN4Q9NQC3 1192 aaKnown RBP28.47■■■□□ 2.15
MBD3-202ENST00000434436 CCDC83Q8IWF9 413 aa28.46■■■□□ 2.15
MBD3-202ENST00000434436 SYTL4Q96C24 671 aaPredicted RBP28.46■■■□□ 2.15
MBD3-202ENST00000434436 PALLDQ8WX93 1383 aa28.46■■■□□ 2.15
MBD3-202ENST00000434436 SH2B1Q9NRF2 756 aaPredicted RBP28.45■■■□□ 2.15
MBD3-202ENST00000434436 PAG1Q9NWQ8 432 aa28.45■■■□□ 2.15
MBD3-202ENST00000434436 HMG20BQ9P0W2 317 aa28.45■■■□□ 2.15
MBD3-202ENST00000434436 ZBTB1Q9Y2K1 713 aa28.45■■■□□ 2.15
MBD3-202ENST00000434436 DOT1LQ8TEK3 1739 aa28.45■■■□□ 2.15
MBD3-202ENST00000434436 CSF1RP07333 972 aa28.45■■■□□ 2.14
MBD3-202ENST00000434436 ME3Q16798 604 aa28.45■■■□□ 2.14
MBD3-202ENST00000434436 MCMDC2Q4G0Z9 681 aa28.45■■■□□ 2.14
MBD3-202ENST00000434436 SYNE4Q8N205 404 aa28.45■■■□□ 2.14
MBD3-202ENST00000434436 SMC3Q9UQE7 1217 aa28.45■■■□□ 2.14
MBD3-202ENST00000434436 TCHHQ07283 1943 aa28.45■■■□□ 2.14
MBD3-202ENST00000434436 ANKRD36CQ5JPF3 1778 aa28.45■■■□□ 2.14
MBD3-202ENST00000434436 GOLIM4O00461 696 aa28.44■■■□□ 2.14
MBD3-202ENST00000434436 CCDC85AQ96PX6 553 aaPredicted RBP28.44■■■□□ 2.14
MBD3-202ENST00000434436 TPCN1Q9ULQ1 816 aa28.44■■■□□ 2.14
MBD3-202ENST00000434436 NSFL1CQ9UNZ2 370 aaKnown RBP28.44■■■□□ 2.14
MBD3-202ENST00000434436 GPTP24298 496 aa28.43■■■□□ 2.14
MBD3-202ENST00000434436 PRIM1P49642 420 aaKnown RBP28.43■■■□□ 2.14
MBD3-202ENST00000434436 BLOC1S2Q6QNY1 142 aa28.43■■■□□ 2.14
MBD3-202ENST00000434436 NLRP10Q86W26 655 aa28.43■■■□□ 2.14
MBD3-202ENST00000434436 CEP126Q9P2H0 1117 aa28.43■■■□□ 2.14
MBD3-202ENST00000434436 SYT1P21579 422 aa28.43■■■□□ 2.14
MBD3-202ENST00000434436 ZSCAN23Q3MJ62 389 aa28.43■■■□□ 2.14
MBD3-202ENST00000434436 RPS6KB1P23443 525 aa28.42■■■□□ 2.14
MBD3-202ENST00000434436 NUP98P52948 1817 aa28.42■■■□□ 2.14
MBD3-202ENST00000434436 ZNF445P59923 1031 aa28.42■■■□□ 2.14
MBD3-202ENST00000434436 SH3TC1Q8TE82 1336 aa28.42■■■□□ 2.14
MBD3-202ENST00000434436 FBXO3Q9UK99 471 aa28.42■■■□□ 2.14
MBD3-202ENST00000434436 CDHR2Q9BYE9 1310 aa28.42■■■□□ 2.14
MBD3-202ENST00000434436 RBM27Q9P2N5 1060 aaKnown RBP28.42■■■□□ 2.14
MBD3-202ENST00000434436 NRAPQ86VF7 1730 aa28.42■■■□□ 2.14
MBD3-202ENST00000434436 FOXD4L6Q3SYB3 417 aaPredicted RBP28.41■■■□□ 2.14
MBD3-202ENST00000434436 SLFNL1Q499Z3 407 aa28.41■■■□□ 2.14
MBD3-202ENST00000434436 FOXD4L3Q6VB84 417 aaPredicted RBP28.41■■■□□ 2.14
MBD3-202ENST00000434436 TCEANC2Q96MN5 208 aa28.41■■■□□ 2.14
MBD3-202ENST00000434436 ALDH8A1Q9H2A2 487 aaPredicted RBP28.41■■■□□ 2.14
MBD3-202ENST00000434436 STX6O43752 255 aa28.41■■■□□ 2.14
MBD3-202ENST00000434436 DTNBO60941 627 aa28.41■■■□□ 2.14
MBD3-202ENST00000434436 LTBP4Q8N2S1 1624 aa28.4■■■□□ 2.14
MBD3-202ENST00000434436 ADAMTS2O95450 1211 aa28.4■■■□□ 2.14
MBD3-202ENST00000434436 IFIT1P09914 478 aaKnown RBP28.4■■■□□ 2.14
MBD3-202ENST00000434436 ZSCAN22P10073 491 aaPredicted RBP28.4■■■□□ 2.14
MBD3-202ENST00000434436 GJB2P29033 226 aa28.4■■■□□ 2.14
MBD3-202ENST00000434436 NECAB1Q8N987 351 aa28.4■■■□□ 2.14
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms