RNA–Protein interactions for RNA: ENST00000433271.6

TMEM248-205, Transcript of transmembrane protein 248, humanhuman

TSL 1 (best)

Gene TMEM248, Length 1,610 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM248-205ENST00000433271 SURF6O75683 361 aaKnown RBP32.85■■■□□ 2.85
TMEM248-205ENST00000433271 CCDC57Q2TAC2 916 aa32.85■■■□□ 2.85
TMEM248-205ENST00000433271 COPRSQ9NQ92 184 aa32.85■■■□□ 2.85
TMEM248-205ENST00000433271 ST5P78524 1137 aa32.84■■■□□ 2.85
TMEM248-205ENST00000433271 FAM161AQ3B820 660 aa32.84■■■□□ 2.85
TMEM248-205ENST00000433271 IFIT5Q13325 482 aaKnown RBP32.84■■■□□ 2.85
TMEM248-205ENST00000433271 SF3B3Q15393 1217 aaKnown RBP32.84■■■□□ 2.85
TMEM248-205ENST00000433271 CCDC152Q4G0S7 254 aa32.84■■■□□ 2.85
TMEM248-205ENST00000433271 NLRP3Q96P20 1036 aa32.84■■■□□ 2.85
TMEM248-205ENST00000433271 CCDC85AQ96PX6 553 aaPredicted RBP32.84■■■□□ 2.85
TMEM248-205ENST00000433271 GREM2Q9H772 168 aa32.84■■■□□ 2.85
TMEM248-205ENST00000433271 EXOC6BQ9Y2D4 811 aa32.84■■■□□ 2.85
TMEM248-205ENST00000433271 PTPN12Q05209 780 aaKnown RBP32.83■■■□□ 2.85
TMEM248-205ENST00000433271 HSP90AB4PQ58FF6 505 aa32.83■■■□□ 2.85
TMEM248-205ENST00000433271 CCDC24Q8N4L8 307 aa32.83■■■□□ 2.85
TMEM248-205ENST00000433271 PA2G4Q9UQ80 394 aaKnown RBP32.83■■■□□ 2.85
TMEM248-205ENST00000433271 RIC1Q4ADV7 1423 aa32.83■■■□□ 2.85
TMEM248-205ENST00000433271 ITGA6P23229 1130 aa32.81■■■□□ 2.84
TMEM248-205ENST00000433271 R3HDM1Q15032 1099 aaKnown RBP32.81■■■□□ 2.84
TMEM248-205ENST00000433271 RTL9Q8NET4 1388 aa32.81■■■□□ 2.84
TMEM248-205ENST00000433271 RAB11FIP3O75154 756 aa32.8■■■□□ 2.84
TMEM248-205ENST00000433271 NUCB1Q02818 461 aa32.8■■■□□ 2.84
TMEM248-205ENST00000433271 C3orf67Q6ZVT6 689 aa32.8■■■□□ 2.84
TMEM248-205ENST00000433271 KLHDC4Q8TBB5 520 aa32.8■■■□□ 2.84
TMEM248-205ENST00000433271 NRXN2Q9P2S2 1712 aa32.8■■■□□ 2.84
TMEM248-205ENST00000433271 ANKRD18BA2A2Z9 1011 aa32.8■■■□□ 2.84
TMEM248-205ENST00000433271 ANKRD45Q5TZF3 282 aa32.8■■■□□ 2.84
TMEM248-205ENST00000433271 PDZRN3Q9UPQ7 1066 aa32.8■■■□□ 2.84
TMEM248-205ENST00000433271 G3BP1Q13283 466 aaKnown RBP eCLIP32.78■■■□□ 2.84
TMEM248-205ENST00000433271 SIL1Q9H173 461 aa32.77■■■□□ 2.84
TMEM248-205ENST00000433271 APBB1O00213 710 aa32.76■■■□□ 2.83
TMEM248-205ENST00000433271 OS9Q13438 667 aaPredicted RBP32.76■■■□□ 2.83
TMEM248-205ENST00000433271 TAF7LQ5H9L4 462 aa32.76■■■□□ 2.83
TMEM248-205ENST00000433271 CHD1LQ86WJ1 897 aa32.76■■■□□ 2.83
TMEM248-205ENST00000433271 ERC1Q8IUD2 1116 aa32.76■■■□□ 2.83
TMEM248-205ENST00000433271 CASZ1Q86V15 1759 aa32.76■■■□□ 2.83
TMEM248-205ENST00000433271 ZNF594Q96JF6 807 aaPredicted RBP32.75■■■□□ 2.83
TMEM248-205ENST00000433271 BRIP1Q9BX63 1249 aa32.75■■■□□ 2.83
TMEM248-205ENST00000433271 LRRCC1Q9C099 1032 aa32.75■■■□□ 2.83
TMEM248-205ENST00000433271 FBXO3Q9UK99 471 aa32.75■■■□□ 2.83
TMEM248-205ENST00000433271 ZBTB47Q9UFB7 747 aaPredicted RBP32.74■■■□□ 2.83
TMEM248-205ENST00000433271 KIF1BPQ96EK5 621 aa32.73■■■□□ 2.83
TMEM248-205ENST00000433271 MTFR1LQ9H019 292 aa32.73■■■□□ 2.83
TMEM248-205ENST00000433271 KLRG2A4D1S0 409 aaPredicted RBP32.73■■■□□ 2.83
TMEM248-205ENST00000433271 CIAO1O76071 339 aa32.73■■■□□ 2.83
TMEM248-205ENST00000433271 SEC31BQ9NQW1 1179 aa32.73■■■□□ 2.83
TMEM248-205ENST00000433271 TNRC6CQ9HCJ0 1690 aaKnown RBP32.72■■■□□ 2.83
TMEM248-205ENST00000433271 EYA2O00167 538 aa32.72■■■□□ 2.83
TMEM248-205ENST00000433271 CRY2Q49AN0 593 aa32.72■■■□□ 2.83
TMEM248-205ENST00000433271 RHPN1Q8TCX5 695 aa32.72■■■□□ 2.83
TMEM248-205ENST00000433271 LNPKQ9C0E8 428 aa32.72■■■□□ 2.83
TMEM248-205ENST00000433271 ZBTB7AO95365 584 aa32.71■■■□□ 2.83
TMEM248-205ENST00000433271 PSDA5PKW4 1024 aaPredicted RBP32.7■■■□□ 2.83
TMEM248-205ENST00000433271 CDC5LQ99459 802 aaKnown RBP32.7■■■□□ 2.83
TMEM248-205ENST00000433271 ATG9AQ7Z3C6 839 aa32.69■■■□□ 2.82
TMEM248-205ENST00000433271 SMARCA5O60264 1052 aaPredicted RBP32.69■■■□□ 2.82
TMEM248-205ENST00000433271 SASH1O94885 1247 aa32.69■■■□□ 2.82
TMEM248-205ENST00000433271 IL15P40933 162 aaPredicted RBP32.69■■■□□ 2.82
TMEM248-205ENST00000433271 LDHAL6AQ6ZMR3 332 aa32.69■■■□□ 2.82
TMEM248-205ENST00000433271 LRRC24Q50LG9 513 aa32.68■■■□□ 2.82
TMEM248-205ENST00000433271 DDX46Q7L014 1031 aaKnown RBP32.68■■■□□ 2.82
TMEM248-205ENST00000433271 PUS3Q9BZE2 481 aaKnown RBP32.68■■■□□ 2.82
TMEM248-205ENST00000433271 PDE6BP35913 854 aa32.67■■■□□ 2.82
TMEM248-205ENST00000433271 IGHMBP2P38935 993 aaKnown RBP32.66■■■□□ 2.82
TMEM248-205ENST00000433271 RPGRQ92834 1020 aaKnown RBP32.66■■■□□ 2.82
TMEM248-205ENST00000433271 MPHOSPH8Q99549 860 aa32.66■■■□□ 2.82
TMEM248-205ENST00000433271 RIPOR2Q9Y4F9 1068 aa32.66■■■□□ 2.82
TMEM248-205ENST00000433271 SKAP1Q86WV1 359 aa32.66■■■□□ 2.82
TMEM248-205ENST00000433271 ANKRD18AQ8IVF6 992 aa32.66■■■□□ 2.82
TMEM248-205ENST00000433271 CNNM1Q9NRU3 951 aa32.66■■■□□ 2.82
TMEM248-205ENST00000433271 ATF5Q9Y2D1 282 aaPredicted RBP32.66■■■□□ 2.82
TMEM248-205ENST00000433271 IL1RAPL2Q9NP60 686 aa32.65■■■□□ 2.82
TMEM248-205ENST00000433271 ANKRD31Q8N7Z5 1873 aa32.65■■■□□ 2.82
TMEM248-205ENST00000433271 HOXA10P31260 410 aaPredicted RBP32.64■■■□□ 2.82
TMEM248-205ENST00000433271 LRP5O75197 1615 aa32.63■■■□□ 2.81
TMEM248-205ENST00000433271 PDE4AP27815 886 aa32.63■■■□□ 2.81
TMEM248-205ENST00000433271 POLD1P28340 1107 aa32.63■■■□□ 2.81
TMEM248-205ENST00000433271 RPS8P62241 208 aaKnown RBP32.63■■■□□ 2.81
TMEM248-205ENST00000433271 TFCP2Q12800 502 aa32.62■■■□□ 2.81
TMEM248-205ENST00000433271 CELF1Q92879 486 aaKnown RBP32.62■■■□□ 2.81
TMEM248-205ENST00000433271 RBM17Q96I25 401 aaKnown RBP32.62■■■□□ 2.81
TMEM248-205ENST00000433271 CLASRPQ8N2M8 674 aaKnown RBP32.62■■■□□ 2.81
TMEM248-205ENST00000433271 BSDC1Q9NW68 430 aaPredicted RBP32.62■■■□□ 2.81
TMEM248-205ENST00000433271 SRGNP10124 158 aa32.61■■■□□ 2.81
TMEM248-205ENST00000433271 C16orf71Q8IYS4 520 aaPredicted RBP32.61■■■□□ 2.81
TMEM248-205ENST00000433271 BCL11AQ9H165 835 aa32.61■■■□□ 2.81
TMEM248-205ENST00000433271 GRAPQ13588 217 aa32.6■■■□□ 2.81
TMEM248-205ENST00000433271 GRAPLQ8TC17 118 aaPredicted RBP32.6■■■□□ 2.81
TMEM248-205ENST00000433271 CEP126Q9P2H0 1117 aa32.6■■■□□ 2.81
TMEM248-205ENST00000433271 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP32.6■■■□□ 2.81
TMEM248-205ENST00000433271 MROH5Q6ZUA9 1318 aa32.59■■■□□ 2.81
TMEM248-205ENST00000433271 RGS3P49796 1198 aa32.59■■■□□ 2.81
TMEM248-205ENST00000433271 CRAMP1Q96RY5 1269 aa32.59■■■□□ 2.81
TMEM248-205ENST00000433271 COL4A1P02462 1669 aa32.59■■■□□ 2.81
TMEM248-205ENST00000433271 GPR108Q9NPR9 543 aa32.59■■■□□ 2.81
TMEM248-205ENST00000433271 TAF1P21675 1872 aa32.58■■■□□ 2.81
TMEM248-205ENST00000433271 C10orf71Q711Q0 1435 aa32.58■■■□□ 2.81
TMEM248-205ENST00000433271 NPR1P16066 1061 aa32.58■■■□□ 2.81
TMEM248-205ENST00000433271 METTL24Q5JXM2 366 aa32.58■■■□□ 2.81
TMEM248-205ENST00000433271 SGIP1Q9BQI5 828 aa32.57■■■□□ 2.8
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms