RNA–Protein interactions for RNA: ENST00000430617.6

ATG4B-212, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 3

Gene ATG4B, Length 623 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-212ENST00000430617 HDAC9Q9UKV0 1011 aa13.43□□□□□ -0.26
ATG4B-212ENST00000430617 TBC1D8O95759 1140 aa13.42□□□□□ -0.26
ATG4B-212ENST00000430617 C3orf67Q6ZVT6 689 aa13.42□□□□□ -0.26
ATG4B-212ENST00000430617 SAMD7Q7Z3H4 446 aa13.42□□□□□ -0.26
ATG4B-212ENST00000430617 KRT26Q7Z3Y9 468 aa13.42□□□□□ -0.26
ATG4B-212ENST00000430617 DDX60Q8IY21 1712 aaKnown RBP13.42□□□□□ -0.26
ATG4B-212ENST00000430617 DUOX1Q9NRD9 1551 aa13.41□□□□□ -0.26
ATG4B-212ENST00000430617 CUL9Q8IWT3 2517 aa13.41□□□□□ -0.26
ATG4B-212ENST00000430617 POTEFA5A3E0 1075 aa13.41□□□□□ -0.26
ATG4B-212ENST00000430617 YDJCA8MPS7 323 aa13.41□□□□□ -0.26
ATG4B-212ENST00000430617 MICALL2Q8IY33 904 aa13.41□□□□□ -0.26
ATG4B-212ENST00000430617 CRAMP1Q96RY5 1269 aa13.41□□□□□ -0.26
ATG4B-212ENST00000430617 RANBP2P49792 3224 aaKnown RBP13.4□□□□□ -0.26
ATG4B-212ENST00000430617 LRRC37AA6NMS7 1700 aa13.4□□□□□ -0.26
ATG4B-212ENST00000430617 FBXO46Q6PJ61 603 aaPredicted RBP13.4□□□□□ -0.26
ATG4B-212ENST00000430617 RASAL3Q86YV0 1011 aa13.4□□□□□ -0.26
ATG4B-212ENST00000430617 VPS33BQ9H267 617 aa13.4□□□□□ -0.26
ATG4B-212ENST00000430617 COLQQ9Y215 455 aaPredicted RBP13.4□□□□□ -0.26
ATG4B-212ENST00000430617 ZBTB12Q9Y330 459 aaPredicted RBP13.4□□□□□ -0.26
ATG4B-212ENST00000430617 KNSTRNQ9Y448 316 aa13.4□□□□□ -0.26
ATG4B-212ENST00000430617 KDM3BQ7LBC6 1761 aa13.4□□□□□ -0.26
ATG4B-212ENST00000430617 PSME4Q14997 1843 aa13.39□□□□□ -0.27
ATG4B-212ENST00000430617 GNAT3A8MTJ3 354 aa13.39□□□□□ -0.27
ATG4B-212ENST00000430617 H7C1D1 291 aa13.39□□□□□ -0.27
ATG4B-212ENST00000430617 CCER2I3L3R5 266 aa13.39□□□□□ -0.27
ATG4B-212ENST00000430617 RGL2O15211 777 aa13.39□□□□□ -0.27
ATG4B-212ENST00000430617 TBC1D10BQ4KMP7 808 aaPredicted RBP13.39□□□□□ -0.27
ATG4B-212ENST00000430617 RBM17Q96I25 401 aaKnown RBP13.39□□□□□ -0.27
ATG4B-212ENST00000430617 RTFDC1Q9BY42 306 aaPredicted RBP13.39□□□□□ -0.27
ATG4B-212ENST00000430617 ATP6V0A2Q9Y487 856 aa13.39□□□□□ -0.27
ATG4B-212ENST00000430617 CEMIPQ8WUJ3 1361 aa13.39□□□□□ -0.27
ATG4B-212ENST00000430617 BTBD11A6QL63 1104 aa13.38□□□□□ -0.27
ATG4B-212ENST00000430617 TNIP1Q15025 636 aa13.38□□□□□ -0.27
ATG4B-212ENST00000430617 NYXQ9GZU5 481 aa13.38□□□□□ -0.27
ATG4B-212ENST00000430617 UBN2Q6ZU65 1347 aa13.38□□□□□ -0.27
ATG4B-212ENST00000430617 LAMB1P07942 1786 aa13.37□□□□□ -0.27
ATG4B-212ENST00000430617 KIAA2012Q0VF49 1180 aa13.37□□□□□ -0.27
ATG4B-212ENST00000430617 RALBP1Q15311 655 aa13.37□□□□□ -0.27
ATG4B-212ENST00000430617 ASTN2O75129 1339 aaPredicted RBP13.37□□□□□ -0.27
ATG4B-212ENST00000430617 MYBBP1AQ9BQG0 1328 aaKnown RBP13.37□□□□□ -0.27
ATG4B-212ENST00000430617 GPR25O00155 361 aa13.36□□□□□ -0.27
ATG4B-212ENST00000430617 CC2D1BQ5T0F9 858 aaKnown RBP13.36□□□□□ -0.27
ATG4B-212ENST00000430617 SUSD4Q5VX71 490 aa13.36□□□□□ -0.27
ATG4B-212ENST00000430617 REM2Q8IYK8 340 aaPredicted RBP13.36□□□□□ -0.27
ATG4B-212ENST00000430617 R3HDMLQ9H3Y0 253 aa13.36□□□□□ -0.27
ATG4B-212ENST00000430617 SNRPA1P09661 255 aaKnown RBP13.35□□□□□ -0.27
ATG4B-212ENST00000430617 GPTP24298 496 aa13.35□□□□□ -0.27
ATG4B-212ENST00000430617 RBM26Q5T8P6 1007 aaKnown RBP13.35□□□□□ -0.27
ATG4B-212ENST00000430617 SUPT20HQ8NEM7 779 aa13.35□□□□□ -0.27
ATG4B-212ENST00000430617 DCPSQ96C86 337 aaKnown RBP13.35□□□□□ -0.27
ATG4B-212ENST00000430617 CDCA5Q96FF9 252 aa13.35□□□□□ -0.27
ATG4B-212ENST00000430617 ABCC4O15439 1325 aa13.35□□□□□ -0.27
ATG4B-212ENST00000430617 DLG5Q8TDM6 1919 aa13.35□□□□□ -0.27
ATG4B-212ENST00000430617 PSMD14O00487 310 aa13.34□□□□□ -0.27
ATG4B-212ENST00000430617 DPP8Q6V1X1 898 aaPredicted RBP13.34□□□□□ -0.27
ATG4B-212ENST00000430617 MOB2Q70IA6 237 aa13.34□□□□□ -0.27
ATG4B-212ENST00000430617 NGEFQ8N5V2 710 aa13.34□□□□□ -0.27
ATG4B-212ENST00000430617 SLC17A8Q8NDX2 589 aa13.34□□□□□ -0.27
ATG4B-212ENST00000430617 DPF2Q92785 391 aa13.34□□□□□ -0.27
ATG4B-212ENST00000430617 IBTKQ9P2D0 1353 aaPredicted RBP13.33□□□□□ -0.27
ATG4B-212ENST00000430617 NTSR2O95665 410 aa13.33□□□□□ -0.28
ATG4B-212ENST00000430617 EN2P19622 333 aaPredicted RBP13.33□□□□□ -0.28
ATG4B-212ENST00000430617 NOM1Q5C9Z4 860 aaKnown RBP13.33□□□□□ -0.28
ATG4B-212ENST00000430617 MPNDQ8N594 471 aa13.33□□□□□ -0.28
ATG4B-212ENST00000430617 KCNQ5Q9NR82 932 aa13.33□□□□□ -0.28
ATG4B-212ENST00000430617 COL4A1P02462 1669 aa13.32□□□□□ -0.28
ATG4B-212ENST00000430617 COL3A1P02461 1466 aaPredicted RBP13.32□□□□□ -0.28
ATG4B-212ENST00000430617 DIAPH1O60610 1272 aaKnown RBP13.32□□□□□ -0.28
ATG4B-212ENST00000430617 TTLL7Q6ZT98 887 aa13.32□□□□□ -0.28
ATG4B-212ENST00000430617 GGA3Q9NZ52 723 aa13.32□□□□□ -0.28
ATG4B-212ENST00000430617 ERVV-1B6SEH8 477 aa13.31□□□□□ -0.28
ATG4B-212ENST00000430617 FKTNO75072 461 aa13.31□□□□□ -0.28
ATG4B-212ENST00000430617 TM4SF4P48230 202 aa13.31□□□□□ -0.28
ATG4B-212ENST00000430617 CCDC184Q52MB2 194 aa13.31□□□□□ -0.28
ATG4B-212ENST00000430617 SP8Q8IXZ3 490 aa13.31□□□□□ -0.28
ATG4B-212ENST00000430617 GAS2L2Q8NHY3 880 aa13.31□□□□□ -0.28
ATG4B-212ENST00000430617 OTUD5Q96G74 571 aa13.31□□□□□ -0.28
ATG4B-212ENST00000430617 TMX4Q9H1E5 349 aaPredicted RBP13.31□□□□□ -0.28
ATG4B-212ENST00000430617 MAP3K15Q6ZN16 1313 aa13.31□□□□□ -0.28
ATG4B-212ENST00000430617 UNC80Q8N2C7 3258 aa13.31□□□□□ -0.28
ATG4B-212ENST00000430617 RTL9Q8NET4 1388 aa13.31□□□□□ -0.28
ATG4B-212ENST00000430617 ZNF646O15015 1829 aaPredicted RBP13.3□□□□□ -0.28
ATG4B-212ENST00000430617 PPP2R1AP30153 589 aa13.3□□□□□ -0.28
ATG4B-212ENST00000430617 CNGB1Q14028 1251 aaPredicted RBP13.3□□□□□ -0.28
ATG4B-212ENST00000430617 KIF4BQ2VIQ3 1234 aa13.3□□□□□ -0.28
ATG4B-212ENST00000430617 SULF1Q8IWU6 871 aa13.3□□□□□ -0.28
ATG4B-212ENST00000430617 ZNF34Q8IZ26 560 aa13.3□□□□□ -0.28
ATG4B-212ENST00000430617 PHACTR3Q96KR7 559 aa13.3□□□□□ -0.28
ATG4B-212ENST00000430617 DBNDD1Q9H9R9 158 aa13.3□□□□□ -0.28
ATG4B-212ENST00000430617 SCAF8Q9UPN6 1271 aaKnown RBP13.3□□□□□ -0.28
ATG4B-212ENST00000430617 LAMA3Q16787 3333 aa13.29□□□□□ -0.28
ATG4B-212ENST00000430617 UBE2Q2LH0YL09 131 aa13.29□□□□□ -0.28
ATG4B-212ENST00000430617 MKRN3Q13064 507 aaKnown RBP13.29□□□□□ -0.28
ATG4B-212ENST00000430617 INTS3Q68E01 1043 aaKnown RBP13.29□□□□□ -0.28
ATG4B-212ENST00000430617 NLRP3Q96P20 1036 aa13.29□□□□□ -0.28
ATG4B-212ENST00000430617 ZBTB3Q9H5J0 574 aa13.29□□□□□ -0.28
ATG4B-212ENST00000430617 BBOX1O75936 387 aa13.28□□□□□ -0.28
ATG4B-212ENST00000430617 OTOP1Q7RTM1 612 aa13.28□□□□□ -0.28
ATG4B-212ENST00000430617 TRIM17Q9Y577 477 aa13.28□□□□□ -0.28
ATG4B-212ENST00000430617 H0YGN5 161 aa13.27□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms