RNA–Protein interactions for RNA: ENST00000429899.1

ATG4B-211, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 4

Gene ATG4B, Length 524 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-211ENST00000429899 SCN9AQ15858 1988 aa13.43□□□□□ -0.26
ATG4B-211ENST00000429899 CDHR2Q9BYE9 1310 aa13.43□□□□□ -0.26
ATG4B-211ENST00000429899 NBPF26B4DH59 902 aa13.43□□□□□ -0.26
ATG4B-211ENST00000429899 EGFRP00533 1210 aa13.43□□□□□ -0.26
ATG4B-211ENST00000429899 GRIPAP1Q4V328 841 aa13.43□□□□□ -0.26
ATG4B-211ENST00000429899 NBPF10Q6P3W6 841 aaKnown RBP13.43□□□□□ -0.26
ATG4B-211ENST00000429899 MORC1Q86VD1 984 aa13.43□□□□□ -0.26
ATG4B-211ENST00000429899 RASAL3Q86YV0 1011 aa13.43□□□□□ -0.26
ATG4B-211ENST00000429899 REM2Q8IYK8 340 aaPredicted RBP13.43□□□□□ -0.26
ATG4B-211ENST00000429899 RPGRQ92834 1020 aaKnown RBP13.43□□□□□ -0.26
ATG4B-211ENST00000429899 H7C1D1 291 aa13.42□□□□□ -0.26
ATG4B-211ENST00000429899 GPR25O00155 361 aa13.42□□□□□ -0.26
ATG4B-211ENST00000429899 C3orf67Q6ZVT6 689 aa13.42□□□□□ -0.26
ATG4B-211ENST00000429899 SAMD7Q7Z3H4 446 aa13.42□□□□□ -0.26
ATG4B-211ENST00000429899 DDX60Q8IY21 1712 aaKnown RBP13.42□□□□□ -0.26
ATG4B-211ENST00000429899 DUOX1Q9NRD9 1551 aa13.41□□□□□ -0.26
ATG4B-211ENST00000429899 YDJCA8MPS7 323 aa13.41□□□□□ -0.26
ATG4B-211ENST00000429899 MICALL2Q8IY33 904 aa13.41□□□□□ -0.26
ATG4B-211ENST00000429899 CRAMP1Q96RY5 1269 aa13.41□□□□□ -0.26
ATG4B-211ENST00000429899 RANBP2P49792 3224 aaKnown RBP13.4□□□□□ -0.26
ATG4B-211ENST00000429899 LRRC37AA6NMS7 1700 aa13.4□□□□□ -0.26
ATG4B-211ENST00000429899 EN2P19622 333 aaPredicted RBP13.4□□□□□ -0.26
ATG4B-211ENST00000429899 TNIP1Q15025 636 aa13.4□□□□□ -0.26
ATG4B-211ENST00000429899 TBC1D10BQ4KMP7 808 aaPredicted RBP13.4□□□□□ -0.26
ATG4B-211ENST00000429899 VPS33BQ9H267 617 aa13.4□□□□□ -0.26
ATG4B-211ENST00000429899 ZBTB12Q9Y330 459 aaPredicted RBP13.4□□□□□ -0.26
ATG4B-211ENST00000429899 KNSTRNQ9Y448 316 aa13.4□□□□□ -0.26
ATG4B-211ENST00000429899 KDM3BQ7LBC6 1761 aa13.4□□□□□ -0.26
ATG4B-211ENST00000429899 PSME4Q14997 1843 aa13.39□□□□□ -0.27
ATG4B-211ENST00000429899 GNAT3A8MTJ3 354 aa13.39□□□□□ -0.27
ATG4B-211ENST00000429899 CCER2I3L3R5 266 aa13.39□□□□□ -0.27
ATG4B-211ENST00000429899 RGL2O15211 777 aa13.39□□□□□ -0.27
ATG4B-211ENST00000429899 FKTNO75072 461 aa13.39□□□□□ -0.27
ATG4B-211ENST00000429899 INTS3Q68E01 1043 aaKnown RBP13.39□□□□□ -0.27
ATG4B-211ENST00000429899 DCPSQ96C86 337 aaKnown RBP13.39□□□□□ -0.27
ATG4B-211ENST00000429899 RBM17Q96I25 401 aaKnown RBP13.39□□□□□ -0.27
ATG4B-211ENST00000429899 RTFDC1Q9BY42 306 aaPredicted RBP13.39□□□□□ -0.27
ATG4B-211ENST00000429899 ATP6V0A2Q9Y487 856 aa13.39□□□□□ -0.27
ATG4B-211ENST00000429899 CEMIPQ8WUJ3 1361 aa13.39□□□□□ -0.27
ATG4B-211ENST00000429899 BTBD11A6QL63 1104 aa13.38□□□□□ -0.27
ATG4B-211ENST00000429899 H0YGN5 161 aa13.38□□□□□ -0.27
ATG4B-211ENST00000429899 RBM26Q5T8P6 1007 aaKnown RBP13.38□□□□□ -0.27
ATG4B-211ENST00000429899 CHRDL2Q6WN34 429 aa13.38□□□□□ -0.27
ATG4B-211ENST00000429899 NYXQ9GZU5 481 aa13.38□□□□□ -0.27
ATG4B-211ENST00000429899 TMX4Q9H1E5 349 aaPredicted RBP13.38□□□□□ -0.27
ATG4B-211ENST00000429899 UBN2Q6ZU65 1347 aa13.38□□□□□ -0.27
ATG4B-211ENST00000429899 LAMB1P07942 1786 aa13.37□□□□□ -0.27
ATG4B-211ENST00000429899 KIAA2012Q0VF49 1180 aa13.37□□□□□ -0.27
ATG4B-211ENST00000429899 RALBP1Q15311 655 aa13.37□□□□□ -0.27
ATG4B-211ENST00000429899 OTUD5Q96G74 571 aa13.37□□□□□ -0.27
ATG4B-211ENST00000429899 ASTN2O75129 1339 aaPredicted RBP13.37□□□□□ -0.27
ATG4B-211ENST00000429899 MYBBP1AQ9BQG0 1328 aaKnown RBP13.37□□□□□ -0.27
ATG4B-211ENST00000429899 MNX1P50219 401 aaPredicted RBP13.36□□□□□ -0.27
ATG4B-211ENST00000429899 CC2D1BQ5T0F9 858 aaKnown RBP13.36□□□□□ -0.27
ATG4B-211ENST00000429899 SUSD4Q5VX71 490 aa13.36□□□□□ -0.27
ATG4B-211ENST00000429899 SUPT20HQ8NEM7 779 aa13.36□□□□□ -0.27
ATG4B-211ENST00000429899 CDCA5Q96FF9 252 aa13.36□□□□□ -0.27
ATG4B-211ENST00000429899 R3HDMLQ9H3Y0 253 aa13.36□□□□□ -0.27
ATG4B-211ENST00000429899 TRIM17Q9Y577 477 aa13.36□□□□□ -0.27
ATG4B-211ENST00000429899 SNRPA1P09661 255 aaKnown RBP13.35□□□□□ -0.27
ATG4B-211ENST00000429899 GPTP24298 496 aa13.35□□□□□ -0.27
ATG4B-211ENST00000429899 NOM1Q5C9Z4 860 aaKnown RBP13.35□□□□□ -0.27
ATG4B-211ENST00000429899 SULF1Q8IWU6 871 aa13.35□□□□□ -0.27
ATG4B-211ENST00000429899 ABCC4O15439 1325 aa13.35□□□□□ -0.27
ATG4B-211ENST00000429899 DLG5Q8TDM6 1919 aa13.35□□□□□ -0.27
ATG4B-211ENST00000429899 PSMD14O00487 310 aa13.34□□□□□ -0.27
ATG4B-211ENST00000429899 MKRN3Q13064 507 aaKnown RBP13.34□□□□□ -0.27
ATG4B-211ENST00000429899 DPP8Q6V1X1 898 aaPredicted RBP13.34□□□□□ -0.27
ATG4B-211ENST00000429899 MOB2Q70IA6 237 aa13.34□□□□□ -0.27
ATG4B-211ENST00000429899 NGEFQ8N5V2 710 aa13.34□□□□□ -0.27
ATG4B-211ENST00000429899 DPF2Q92785 391 aa13.34□□□□□ -0.27
ATG4B-211ENST00000429899 RBM27Q9P2N5 1060 aaKnown RBP13.34□□□□□ -0.27
ATG4B-211ENST00000429899 PITPNM2Q9BZ72 1349 aa13.34□□□□□ -0.27
ATG4B-211ENST00000429899 IBTKQ9P2D0 1353 aaPredicted RBP13.33□□□□□ -0.27
ATG4B-211ENST00000429899 NTSR2O95665 410 aa13.33□□□□□ -0.28
ATG4B-211ENST00000429899 OTOP1Q7RTM1 612 aa13.33□□□□□ -0.28
ATG4B-211ENST00000429899 MPNDQ8N594 471 aa13.33□□□□□ -0.28
ATG4B-211ENST00000429899 KCNQ5Q9NR82 932 aa13.33□□□□□ -0.28
ATG4B-211ENST00000429899 GGA3Q9NZ52 723 aa13.33□□□□□ -0.28
ATG4B-211ENST00000429899 COL4A1P02462 1669 aa13.32□□□□□ -0.28
ATG4B-211ENST00000429899 COL3A1P02461 1466 aaPredicted RBP13.32□□□□□ -0.28
ATG4B-211ENST00000429899 DIAPH1O60610 1272 aaKnown RBP13.32□□□□□ -0.28
ATG4B-211ENST00000429899 TM4SF4P48230 202 aa13.32□□□□□ -0.28
ATG4B-211ENST00000429899 TTLL7Q6ZT98 887 aa13.32□□□□□ -0.28
ATG4B-211ENST00000429899 ERVV-1B6SEH8 477 aa13.31□□□□□ -0.28
ATG4B-211ENST00000429899 UBE2Q2LH0YL09 131 aa13.31□□□□□ -0.28
ATG4B-211ENST00000429899 CCDC184Q52MB2 194 aa13.31□□□□□ -0.28
ATG4B-211ENST00000429899 SP8Q8IXZ3 490 aa13.31□□□□□ -0.28
ATG4B-211ENST00000429899 GAS2L2Q8NHY3 880 aa13.31□□□□□ -0.28
ATG4B-211ENST00000429899 MAP3K15Q6ZN16 1313 aa13.31□□□□□ -0.28
ATG4B-211ENST00000429899 UNC80Q8N2C7 3258 aa13.31□□□□□ -0.28
ATG4B-211ENST00000429899 RTL9Q8NET4 1388 aa13.31□□□□□ -0.28
ATG4B-211ENST00000429899 ZNF646O15015 1829 aaPredicted RBP13.3□□□□□ -0.28
ATG4B-211ENST00000429899 PPP2R1AP30153 589 aa13.3□□□□□ -0.28
ATG4B-211ENST00000429899 CNGB1Q14028 1251 aaPredicted RBP13.3□□□□□ -0.28
ATG4B-211ENST00000429899 KIF4BQ2VIQ3 1234 aa13.3□□□□□ -0.28
ATG4B-211ENST00000429899 ZNF34Q8IZ26 560 aa13.3□□□□□ -0.28
ATG4B-211ENST00000429899 PHACTR3Q96KR7 559 aa13.3□□□□□ -0.28
ATG4B-211ENST00000429899 TMEM106CQ9BVX2 250 aa13.3□□□□□ -0.28
ATG4B-211ENST00000429899 DBNDD1Q9H9R9 158 aa13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 91.5 ms