RNA–Protein interactions for RNA: ENST00000429344.6

CACTIN-203, Transcript of cactin, spliceosome C complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CACTIN, Length 3,612 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACTIN-203ENST00000429344 U2AF2P26368 475 aaKnown RBP eCLIP17.7■□□□□ 0.42
CACTIN-203ENST00000429344 TAF7LQ5H9L4 462 aa17.7■□□□□ 0.42
CACTIN-203ENST00000429344 AP5Z1O43299 807 aa17.69■□□□□ 0.42
CACTIN-203ENST00000429344 LETM1O95202 739 aaPredicted RBP17.69■□□□□ 0.42
CACTIN-203ENST00000429344 LIG1P18858 919 aa17.69■□□□□ 0.42
CACTIN-203ENST00000429344 UVSSAQ2YD98 709 aa17.69■□□□□ 0.42
CACTIN-203ENST00000429344 SUCLG2Q96I99 432 aa17.69■□□□□ 0.42
CACTIN-203ENST00000429344 FAM227BQ96M60 508 aa17.69■□□□□ 0.42
CACTIN-203ENST00000429344 DACT1Q9NYF0 836 aa17.69■□□□□ 0.42
CACTIN-203ENST00000429344 TMOD3Q9NYL9 352 aa17.69■□□□□ 0.42
CACTIN-203ENST00000429344 RPAP1Q9BWH6 1393 aaPredicted RBP17.69■□□□□ 0.42
CACTIN-203ENST00000429344 KRT85P78386 507 aa17.69■□□□□ 0.42
CACTIN-203ENST00000429344 ERC1Q8IUD2 1116 aa17.69■□□□□ 0.42
CACTIN-203ENST00000429344 FSD1Q9BTV5 496 aa17.69■□□□□ 0.42
CACTIN-203ENST00000429344 BTG4Q9NY30 223 aa17.69■□□□□ 0.42
CACTIN-203ENST00000429344 LSG1Q9H089 658 aaKnown RBP17.68■□□□□ 0.42
CACTIN-203ENST00000429344 PIP4K2BP78356 416 aa17.68■□□□□ 0.42
CACTIN-203ENST00000429344 MAP3K11Q16584 847 aa17.68■□□□□ 0.42
CACTIN-203ENST00000429344 ME3Q16798 604 aa17.68■□□□□ 0.42
CACTIN-203ENST00000429344 CDC37L1Q7L3B6 337 aa17.68■□□□□ 0.42
CACTIN-203ENST00000429344 MST1RQ04912 1400 aa17.68■□□□□ 0.42
CACTIN-203ENST00000429344 PRIMPOLQ96LW4 560 aa17.68■□□□□ 0.42
CACTIN-203ENST00000429344 NRBP1Q9UHY1 535 aa17.68■□□□□ 0.42
CACTIN-203ENST00000429344 MTMR6Q9Y217 621 aa17.68■□□□□ 0.42
CACTIN-203ENST00000429344 A1BGP04217 495 aa17.67■□□□□ 0.42
CACTIN-203ENST00000429344 ZNF710Q8N1W2 664 aa17.67■□□□□ 0.42
CACTIN-203ENST00000429344 PI4K2BQ8TCG2 481 aa17.67■□□□□ 0.42
CACTIN-203ENST00000429344 SPATA32Q96LK8 384 aa17.67■□□□□ 0.42
CACTIN-203ENST00000429344 STAP2Q9UGK3 403 aa17.67■□□□□ 0.42
CACTIN-203ENST00000429344 NDUFB9Q9Y6M9 179 aa17.67■□□□□ 0.42
CACTIN-203ENST00000429344 CDK11BP21127 795 aaKnown RBP17.67■□□□□ 0.42
CACTIN-203ENST00000429344 ANO6Q4KMQ2 910 aa17.67■□□□□ 0.42
CACTIN-203ENST00000429344 LRRC2Q9BYS8 371 aa17.67■□□□□ 0.42
CACTIN-203ENST00000429344 NOL12Q9UGY1 213 aaKnown RBP eCLIP17.67■□□□□ 0.42
CACTIN-203ENST00000429344 V9GYY5 206 aaPredicted RBP17.67■□□□□ 0.42
CACTIN-203ENST00000429344 CHD2O14647 1828 aaKnown RBP17.67■□□□□ 0.42
CACTIN-203ENST00000429344 TNS3Q68CZ2 1445 aa17.67■□□□□ 0.42
CACTIN-203ENST00000429344 SALL3Q9BXA9 1300 aa17.67■□□□□ 0.42
CACTIN-203ENST00000429344 A0A087WWV3 80 aa17.67■□□□□ 0.42
CACTIN-203ENST00000429344 GLRX3O76003 335 aaKnown RBP17.67■□□□□ 0.42
CACTIN-203ENST00000429344 COL9A3Q14050 684 aaPredicted RBP17.67■□□□□ 0.42
CACTIN-203ENST00000429344 RBM8AQ9Y5S9 174 aaKnown RBP17.67■□□□□ 0.42
CACTIN-203ENST00000429344 H3BQV1 296 aa17.66■□□□□ 0.42
CACTIN-203ENST00000429344 GORABQ5T7V8 394 aa17.66■□□□□ 0.42
CACTIN-203ENST00000429344 IFFO2Q5TF58 517 aa17.66■□□□□ 0.42
CACTIN-203ENST00000429344 DNAJC2Q99543 621 aaKnown RBP17.66■□□□□ 0.42
CACTIN-203ENST00000429344 ATP2B3Q16720 1220 aa17.66■□□□□ 0.42
CACTIN-203ENST00000429344 TTC6Q86TZ1 520 aa17.66■□□□□ 0.42
CACTIN-203ENST00000429344 TPD52L1Q16890 204 aaPredicted RBP17.66■□□□□ 0.42
CACTIN-203ENST00000429344 ADCY9O60503 1353 aa17.65■□□□□ 0.42
CACTIN-203ENST00000429344 TCHHQ07283 1943 aa17.65■□□□□ 0.42
CACTIN-203ENST00000429344 EDC3Q96F86 508 aaKnown RBP17.65■□□□□ 0.42
CACTIN-203ENST00000429344 ECHDC1Q9NTX5 307 aa17.65■□□□□ 0.42
CACTIN-203ENST00000429344 TYRO3Q06418 890 aa17.65■□□□□ 0.42
CACTIN-203ENST00000429344 DNAJC25Q9H1X3 360 aa17.65■□□□□ 0.42
CACTIN-203ENST00000429344 PCDH11XQ9BZA7 1347 aa17.65■□□□□ 0.42
CACTIN-203ENST00000429344 PCDH11YQ9BZA8 1340 aa17.65■□□□□ 0.42
CACTIN-203ENST00000429344 ADAMTSL3P82987 1691 aa17.65■□□□□ 0.42
CACTIN-203ENST00000429344 NAA30Q147X3 362 aaPredicted RBP17.65■□□□□ 0.42
CACTIN-203ENST00000429344 FILIP1Q7Z7B0 1213 aa17.65■□□□□ 0.42
CACTIN-203ENST00000429344 KCNF1Q9H3M0 494 aa17.65■□□□□ 0.42
CACTIN-203ENST00000429344 BLOC1S2Q6QNY1 142 aa17.64■□□□□ 0.41
CACTIN-203ENST00000429344 TPCN1Q9ULQ1 816 aa17.64■□□□□ 0.41
CACTIN-203ENST00000429344 NFAT5O94916 1531 aa17.64■□□□□ 0.41
CACTIN-203ENST00000429344 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP17.64■□□□□ 0.41
CACTIN-203ENST00000429344 WDR17Q8IZU2 1322 aa17.63■□□□□ 0.41
CACTIN-203ENST00000429344 NMIQ13287 307 aaPredicted RBP17.63■□□□□ 0.41
CACTIN-203ENST00000429344 TTC14Q96N46 770 aa17.63■□□□□ 0.41
CACTIN-203ENST00000429344 GCKRQ14397 625 aa17.63■□□□□ 0.41
CACTIN-203ENST00000429344 ERCC4Q92889 916 aaPredicted RBP17.63■□□□□ 0.41
CACTIN-203ENST00000429344 TRMT1Q9NXH9 659 aaKnown RBP17.63■□□□□ 0.41
CACTIN-203ENST00000429344 ZNF771Q7L3S4 317 aaPredicted RBP17.62■□□□□ 0.41
CACTIN-203ENST00000429344 METTL22Q9BUU2 404 aaPredicted RBP17.62■□□□□ 0.41
CACTIN-203ENST00000429344 NEURL1BA8MQ27 555 aa17.62■□□□□ 0.41
CACTIN-203ENST00000429344 GOLGA6L19H0YKK7 550 aa17.62■□□□□ 0.41
CACTIN-203ENST00000429344 TNNT1P13805 278 aa17.62■□□□□ 0.41
CACTIN-203ENST00000429344 GUCY1B3Q02153 619 aa17.62■□□□□ 0.41
CACTIN-203ENST00000429344 CREB3L3Q68CJ9 461 aa17.62■□□□□ 0.41
CACTIN-203ENST00000429344 LMBR1LQ6UX01 489 aa17.62■□□□□ 0.41
CACTIN-203ENST00000429344 SMAP1Q8IYB5 467 aaPredicted RBP17.62■□□□□ 0.41
CACTIN-203ENST00000429344 FAM200AQ8TCP9 573 aa17.62■□□□□ 0.41
CACTIN-203ENST00000429344 PRDM4Q9UKN5 801 aa17.62■□□□□ 0.41
CACTIN-203ENST00000429344 KIAA1524Q8TCG1 905 aa17.61■□□□□ 0.41
CACTIN-203ENST00000429344 BBXQ8WY36 941 aaPredicted RBP17.61■□□□□ 0.41
CACTIN-203ENST00000429344 GPTP24298 496 aa17.61■□□□□ 0.41
CACTIN-203ENST00000429344 TTLL7Q6ZT98 887 aa17.61■□□□□ 0.41
CACTIN-203ENST00000429344 TAF6LQ9Y6J9 622 aa17.61■□□□□ 0.41
CACTIN-203ENST00000429344 NCAPD2Q15021 1401 aa17.61■□□□□ 0.41
CACTIN-203ENST00000429344 BECN2A8MW95 431 aa17.61■□□□□ 0.41
CACTIN-203ENST00000429344 ZNF165P49910 485 aa17.61■□□□□ 0.41
CACTIN-203ENST00000429344 NWD1Q149M9 1564 aa17.6■□□□□ 0.41
CACTIN-203ENST00000429344 JAK2O60674 1132 aa17.6■□□□□ 0.41
CACTIN-203ENST00000429344 IGKV5-2P06315 115 aa17.6■□□□□ 0.41
CACTIN-203ENST00000429344 CBX8Q9HC52 389 aa17.6■□□□□ 0.41
CACTIN-203ENST00000429344 LTN1O94822 1766 aa17.6■□□□□ 0.41
CACTIN-203ENST00000429344 MEGF6O75095 1541 aa17.6■□□□□ 0.41
CACTIN-203ENST00000429344 KDM4FA0A1W2PPD8 638 aa17.6■□□□□ 0.41
CACTIN-203ENST00000429344 KIF6Q6ZMV9 814 aa17.6■□□□□ 0.41
CACTIN-203ENST00000429344 ZSCAN31Q96LW9 406 aaPredicted RBP17.6■□□□□ 0.41
CACTIN-203ENST00000429344 CLIP2Q9UDT6 1046 aa17.6■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms