RNA–Protein interactions for RNA: ENST00000425971.2

HMGB1P32-201, Transcript of high mobility group box 1 pseudogene 32, humanhuman

BASIC

Gene HMGB1P32, Length 565 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P32-201ENST00000425971 FAM157BP0CG42 384 aa10.2□□□□□ -0.78
HMGB1P32-201ENST00000425971 TSNAXIP1Q2TAA8 658 aa10.2□□□□□ -0.78
HMGB1P32-201ENST00000425971 EFHC2Q5JST6 749 aa10.2□□□□□ -0.78
HMGB1P32-201ENST00000425971 ZNF438Q7Z4V0 828 aa10.2□□□□□ -0.78
HMGB1P32-201ENST00000425971 BRD7Q9NPI1 651 aa10.2□□□□□ -0.78
HMGB1P32-201ENST00000425971 DACH1Q9UI36 760 aa10.2□□□□□ -0.78
HMGB1P32-201ENST00000425971 CADPSQ9ULU8 1353 aa10.2□□□□□ -0.78
HMGB1P32-201ENST00000425971 CEP164Q9UPV0 1460 aa10.2□□□□□ -0.78
HMGB1P32-201ENST00000425971 SLC35F4A4IF30 521 aa10.19□□□□□ -0.78
HMGB1P32-201ENST00000425971 GNA15P30679 374 aa10.19□□□□□ -0.78
HMGB1P32-201ENST00000425971 KCNQ4P56696 695 aa10.19□□□□□ -0.78
HMGB1P32-201ENST00000425971 UBAP2LQ14157 1087 aaKnown RBP10.19□□□□□ -0.78
HMGB1P32-201ENST00000425971 BACH2Q9BYV9 841 aa10.19□□□□□ -0.78
HMGB1P32-201ENST00000425971 ZCCHC2Q9C0B9 1178 aaKnown RBP10.19□□□□□ -0.78
HMGB1P32-201ENST00000425971 ELP3Q9H9T3 547 aa10.19□□□□□ -0.78
HMGB1P32-201ENST00000425971 TMEM63CQ9P1W3 806 aa10.19□□□□□ -0.78
HMGB1P32-201ENST00000425971 SOBPA7XYQ1 873 aa10.18□□□□□ -0.78
HMGB1P32-201ENST00000425971 EFSO43281 561 aa10.18□□□□□ -0.78
HMGB1P32-201ENST00000425971 SORBS3O60504 671 aa10.18□□□□□ -0.78
HMGB1P32-201ENST00000425971 XYLBO75191 536 aa10.18□□□□□ -0.78
HMGB1P32-201ENST00000425971 PSMD2Q13200 908 aa10.18□□□□□ -0.78
HMGB1P32-201ENST00000425971 USPL1Q5W0Q7 1092 aa10.18□□□□□ -0.78
HMGB1P32-201ENST00000425971 ITGAEP38570 1179 aa10.17□□□□□ -0.78
HMGB1P32-201ENST00000425971 PTSQ03393 145 aa10.17□□□□□ -0.78
HMGB1P32-201ENST00000425971 FIGNL1Q6PIW4 674 aa10.17□□□□□ -0.78
HMGB1P32-201ENST00000425971 FRMD6Q96NE9 622 aa10.17□□□□□ -0.78
HMGB1P32-201ENST00000425971 CHRDQ9H2X0 955 aa10.17□□□□□ -0.78
HMGB1P32-201ENST00000425971 ZFYVE28Q9HCC9 887 aa10.17□□□□□ -0.78
HMGB1P32-201ENST00000425971 MRS2Q9HD23 443 aa10.17□□□□□ -0.78
HMGB1P32-201ENST00000425971 ATXN7O15265 892 aaPredicted RBP10.15□□□□□ -0.78
HMGB1P32-201ENST00000425971 PHACTR2O75167 634 aa10.15□□□□□ -0.78
HMGB1P32-201ENST00000425971 NLRP13Q86W25 1043 aa10.15□□□□□ -0.78
HMGB1P32-201ENST00000425971 CCDC74AQ96AQ1 378 aa10.15□□□□□ -0.78
HMGB1P32-201ENST00000425971 ABI2Q9NYB9 513 aaPredicted RBP10.15□□□□□ -0.78
HMGB1P32-201ENST00000425971 KCNH4Q9UQ05 1017 aa10.15□□□□□ -0.78
HMGB1P32-201ENST00000425971 PCDHGC4Q9Y5F7 938 aa10.15□□□□□ -0.78
HMGB1P32-201ENST00000425971 ZNF608Q9ULD9 1512 aaPredicted RBP10.15□□□□□ -0.78
HMGB1P32-201ENST00000425971 SCAMP3O14828 347 aaKnown RBP10.14□□□□□ -0.79
HMGB1P32-201ENST00000425971 SFSWAPQ12872 951 aaKnown RBP10.14□□□□□ -0.79
HMGB1P32-201ENST00000425971 RIPOR1Q6ZS17 1223 aa10.14□□□□□ -0.79
HMGB1P32-201ENST00000425971 NUCKS1Q9H1E3 243 aaKnown RBP10.14□□□□□ -0.79
HMGB1P32-201ENST00000425971 NDFIP2Q9NV92 336 aa10.14□□□□□ -0.79
HMGB1P32-201ENST00000425971 VTI1BQ9UEU0 232 aa10.14□□□□□ -0.79
HMGB1P32-201ENST00000425971 RSF1Q96T23 1441 aaPredicted RBP10.14□□□□□ -0.79
HMGB1P32-201ENST00000425971 VEGFBP49765 207 aa10.13□□□□□ -0.79
HMGB1P32-201ENST00000425971 LAMC2Q13753 1193 aa10.13□□□□□ -0.79
HMGB1P32-201ENST00000425971 LARP7Q4G0J3 582 aaKnown RBP eCLIP10.13□□□□□ -0.79
HMGB1P32-201ENST00000425971 ZNF787Q6DD87 383 aa10.13□□□□□ -0.79
HMGB1P32-201ENST00000425971 CUEDC1Q9NWM3 386 aaPredicted RBP10.13□□□□□ -0.79
HMGB1P32-201ENST00000425971 CNTN3Q9P232 1028 aa10.13□□□□□ -0.79
HMGB1P32-201ENST00000425971 HCN2Q9UL51 889 aa10.13□□□□□ -0.79
HMGB1P32-201ENST00000425971 SPG7Q9UQ90 795 aa10.13□□□□□ -0.79
HMGB1P32-201ENST00000425971 AK5Q9Y6K8 562 aa10.13□□□□□ -0.79
HMGB1P32-201ENST00000425971 URB2Q14146 1524 aaKnown RBP10.12□□□□□ -0.79
HMGB1P32-201ENST00000425971 FANCD2Q9BXW9 1451 aa10.12□□□□□ -0.79
HMGB1P32-201ENST00000425971 H7C1W4 665 aa10.12□□□□□ -0.79
HMGB1P32-201ENST00000425971 IRS1P35568 1242 aa10.12□□□□□ -0.79
HMGB1P32-201ENST00000425971 TNP2Q05952 138 aa10.12□□□□□ -0.79
HMGB1P32-201ENST00000425971 PI16Q6UXB8 463 aa10.12□□□□□ -0.79
HMGB1P32-201ENST00000425971 TRIM22Q8IYM9 498 aa10.12□□□□□ -0.79
HMGB1P32-201ENST00000425971 C1orf127Q8N9H9 656 aa10.12□□□□□ -0.79
HMGB1P32-201ENST00000425971 KIFC2Q96AC6 838 aa10.12□□□□□ -0.79
HMGB1P32-201ENST00000425971 TRIM47Q96LD4 638 aa10.12□□□□□ -0.79
HMGB1P32-201ENST00000425971 SENP2Q9HC62 589 aa10.12□□□□□ -0.79
HMGB1P32-201ENST00000425971 CHD1O14646 1710 aa10.12□□□□□ -0.79
HMGB1P32-201ENST00000425971 PEG3Q9GZU2 1588 aa10.11□□□□□ -0.79
HMGB1P32-201ENST00000425971 DCDC2BA2VCK2 349 aa10.11□□□□□ -0.79
HMGB1P32-201ENST00000425971 EREGO14944 169 aa10.11□□□□□ -0.79
HMGB1P32-201ENST00000425971 DBN1Q16643 649 aa10.11□□□□□ -0.79
HMGB1P32-201ENST00000425971 GALNT12Q8IXK2 581 aa10.11□□□□□ -0.79
HMGB1P32-201ENST00000425971 CCDC155Q8N6L0 562 aa10.11□□□□□ -0.79
HMGB1P32-201ENST00000425971 TMEM87AQ8NBN3 555 aa10.11□□□□□ -0.79
HMGB1P32-201ENST00000425971 EPS8L3Q8TE67 593 aaKnown RBP10.11□□□□□ -0.79
HMGB1P32-201ENST00000425971 GSX2Q9BZM3 304 aa10.11□□□□□ -0.79
HMGB1P32-201ENST00000425971 STRN4Q9NRL3 753 aa10.11□□□□□ -0.79
HMGB1P32-201ENST00000425971 GIPC1O14908 333 aa10.1□□□□□ -0.79
HMGB1P32-201ENST00000425971 KHNYNO15037 678 aaKnown RBP10.1□□□□□ -0.79
HMGB1P32-201ENST00000425971 CTSHP09668 335 aa10.1□□□□□ -0.79
HMGB1P32-201ENST00000425971 MAPTP10636 758 aaKnown RBP10.1□□□□□ -0.79
HMGB1P32-201ENST00000425971 HDLBPQ00341 1268 aaKnown RBP10.1□□□□□ -0.79
HMGB1P32-201ENST00000425971 CCINQ13939 588 aa10.1□□□□□ -0.79
HMGB1P32-201ENST00000425971 CRELD1Q96HD1 420 aa10.1□□□□□ -0.79
HMGB1P32-201ENST00000425971 GMCL1Q96IK5 515 aa10.1□□□□□ -0.79
HMGB1P32-201ENST00000425971 C12orf49Q9H741 205 aa10.1□□□□□ -0.79
HMGB1P32-201ENST00000425971 NPHS2Q9NP85 383 aa10.1□□□□□ -0.79
HMGB1P32-201ENST00000425971 METTL5Q9NRN9 209 aaKnown RBP10.1□□□□□ -0.79
HMGB1P32-201ENST00000425971 POTECB2RU33 542 aa10.09□□□□□ -0.79
HMGB1P32-201ENST00000425971 BNIP3LO60238 219 aa10.09□□□□□ -0.79
HMGB1P32-201ENST00000425971 SASH3O75995 380 aa10.09□□□□□ -0.79
HMGB1P32-201ENST00000425971 EIF4BP23588 611 aaKnown RBP10.09□□□□□ -0.79
HMGB1P32-201ENST00000425971 PMEPA1Q969W9 287 aa10.09□□□□□ -0.79
HMGB1P32-201ENST00000425971 ZNF837Q96EG3 531 aaPredicted RBP10.09□□□□□ -0.79
HMGB1P32-201ENST00000425971 POLR3DP05423 398 aaPredicted RBP10.08□□□□□ -0.8
HMGB1P32-201ENST00000425971 TTC39BQ5VTQ0 682 aaPredicted RBP10.08□□□□□ -0.8
HMGB1P32-201ENST00000425971 METTL16Q86W50 562 aaKnown RBP10.08□□□□□ -0.8
HMGB1P32-201ENST00000425971 C8orf37Q96NL8 207 aa10.08□□□□□ -0.8
HMGB1P32-201ENST00000425971 OSBPL7Q9BZF2 842 aa10.08□□□□□ -0.8
HMGB1P32-201ENST00000425971 MMP20O60882 483 aa10.07□□□□□ -0.8
HMGB1P32-201ENST00000425971 CYP2E1P05181 493 aaPredicted RBP10.07□□□□□ -0.8
HMGB1P32-201ENST00000425971 CES1P23141 567 aa10.07□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 90.1 ms