RNA–Protein interactions for RNA: ENST00000423717.1

EPDR1-202, Transcript of ependymin related 1, humanhuman

TSL 1 (best) BASIC

Gene EPDR1, Length 638 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPDR1-202ENST00000423717 OLFM4Q6UX06 510 aa28.61■■■□□ 2.17
EPDR1-202ENST00000423717 CLUAP1Q96AJ1 413 aa28.61■■■□□ 2.17
EPDR1-202ENST00000423717 TMX4Q9H1E5 349 aaPredicted RBP28.61■■■□□ 2.17
EPDR1-202ENST00000423717 CASP7P55210 303 aa28.6■■■□□ 2.17
EPDR1-202ENST00000423717 GRAPQ13588 217 aa28.6■■■□□ 2.17
EPDR1-202ENST00000423717 SOGA3Q5TF21 947 aa28.6■■■□□ 2.17
EPDR1-202ENST00000423717 ATF7IPQ6VMQ6 1270 aa28.6■■■□□ 2.17
EPDR1-202ENST00000423717 GRAPLQ8TC17 118 aaPredicted RBP28.6■■■□□ 2.17
EPDR1-202ENST00000423717 RASSF7Q02833 373 aa28.59■■■□□ 2.17
EPDR1-202ENST00000423717 CCDC93Q567U6 631 aa28.59■■■□□ 2.17
EPDR1-202ENST00000423717 RCAN3Q9UKA8 241 aa28.59■■■□□ 2.17
EPDR1-202ENST00000423717 TNNQ9UQP3 1299 aa28.59■■■□□ 2.17
EPDR1-202ENST00000423717 TRIM27P14373 513 aa28.58■■■□□ 2.17
EPDR1-202ENST00000423717 SEC31BQ9NQW1 1179 aa28.58■■■□□ 2.17
EPDR1-202ENST00000423717 CHMP3Q9Y3E7 222 aa28.58■■■□□ 2.17
EPDR1-202ENST00000423717 TTLL11Q8NHH1 800 aa28.57■■■□□ 2.16
EPDR1-202ENST00000423717 CELF1Q92879 486 aaKnown RBP28.57■■■□□ 2.16
EPDR1-202ENST00000423717 BBOX1O75936 387 aa28.56■■■□□ 2.16
EPDR1-202ENST00000423717 NBPF7P0C2Y1 421 aaPredicted RBP28.56■■■□□ 2.16
EPDR1-202ENST00000423717 C7orf43Q8WVR3 580 aa28.56■■■□□ 2.16
EPDR1-202ENST00000423717 PLA2G12BQ9BX93 195 aa28.55■■■□□ 2.16
EPDR1-202ENST00000423717 YY1P25490 414 aa28.54■■■□□ 2.16
EPDR1-202ENST00000423717 SLC51AQ86UW1 340 aa28.54■■■□□ 2.16
EPDR1-202ENST00000423717 FTSJ3Q8IY81 847 aaKnown RBP28.54■■■□□ 2.16
EPDR1-202ENST00000423717 GREM2Q9H772 168 aa28.54■■■□□ 2.16
EPDR1-202ENST00000423717 GOLGB1Q14789 3259 aaKnown RBP28.53■■■□□ 2.16
EPDR1-202ENST00000423717 RPS8P62241 208 aaKnown RBP28.53■■■□□ 2.16
EPDR1-202ENST00000423717 RTKN2Q8IZC4 609 aa28.53■■■□□ 2.16
EPDR1-202ENST00000423717 SUCLG2Q96I99 432 aa28.53■■■□□ 2.16
EPDR1-202ENST00000423717 TAOK3Q9H2K8 898 aa28.53■■■□□ 2.16
EPDR1-202ENST00000423717 NFKBIEO00221 500 aa28.52■■■□□ 2.16
EPDR1-202ENST00000423717 FOXO4P98177 505 aa28.52■■■□□ 2.16
EPDR1-202ENST00000423717 CC2D2BQ6DHV5 1058 aa28.52■■■□□ 2.16
EPDR1-202ENST00000423717 USP44Q9H0E7 712 aa28.52■■■□□ 2.16
EPDR1-202ENST00000423717 ATP6V0A2Q9Y487 856 aa28.52■■■□□ 2.16
EPDR1-202ENST00000423717 FER1L6Q2WGJ9 1857 aa28.52■■■□□ 2.16
EPDR1-202ENST00000423717 CCDC88AQ3V6T2 1871 aa28.51■■■□□ 2.15
EPDR1-202ENST00000423717 FAM161AQ3B820 660 aa28.51■■■□□ 2.15
EPDR1-202ENST00000423717 EPHA10Q5JZY3 1008 aa28.51■■■□□ 2.15
EPDR1-202ENST00000423717 C9orf131Q5VYM1 1079 aa28.51■■■□□ 2.15
EPDR1-202ENST00000423717 LMBR1LQ6UX01 489 aa28.51■■■□□ 2.15
EPDR1-202ENST00000423717 ANKRD18AQ8IVF6 992 aa28.51■■■□□ 2.15
EPDR1-202ENST00000423717 CDC5LQ99459 802 aaKnown RBP28.51■■■□□ 2.15
EPDR1-202ENST00000423717 RNF181Q9P0P0 153 aa28.51■■■□□ 2.15
EPDR1-202ENST00000423717 INTS3Q68E01 1043 aaKnown RBP28.5■■■□□ 2.15
EPDR1-202ENST00000423717 SP8Q8IXZ3 490 aa28.5■■■□□ 2.15
EPDR1-202ENST00000423717 SPEF2Q9C093 1822 aa28.5■■■□□ 2.15
EPDR1-202ENST00000423717 UTYO14607 1347 aa28.49■■■□□ 2.15
EPDR1-202ENST00000423717 COL4A1P02462 1669 aa28.49■■■□□ 2.15
EPDR1-202ENST00000423717 CSF1RP07333 972 aa28.49■■■□□ 2.15
EPDR1-202ENST00000423717 UBTFL1P0CB47 393 aaPredicted RBP28.49■■■□□ 2.15
EPDR1-202ENST00000423717 ITGA6P23229 1130 aa28.49■■■□□ 2.15
EPDR1-202ENST00000423717 TMC4Q7Z404 712 aa28.49■■■□□ 2.15
EPDR1-202ENST00000423717 DZIP1LQ8IYY4 767 aaKnown RBP28.49■■■□□ 2.15
EPDR1-202ENST00000423717 TMEM57Q8N5G2 664 aa28.49■■■□□ 2.15
EPDR1-202ENST00000423717 SBF1O95248 1867 aa28.49■■■□□ 2.15
EPDR1-202ENST00000423717 FKBP4Q02790 459 aaKnown RBP eCLIP28.48■■■□□ 2.15
EPDR1-202ENST00000423717 ANKRD18BA2A2Z9 1011 aa28.47■■■□□ 2.15
EPDR1-202ENST00000423717 PLIN1O60240 522 aa28.47■■■□□ 2.15
EPDR1-202ENST00000423717 LMNB1P20700 586 aa28.47■■■□□ 2.15
EPDR1-202ENST00000423717 IGHMBP2P38935 993 aaKnown RBP28.47■■■□□ 2.15
EPDR1-202ENST00000423717 IFIT5Q13325 482 aaKnown RBP28.47■■■□□ 2.15
EPDR1-202ENST00000423717 BICC1Q9H694 974 aaKnown RBP28.47■■■□□ 2.15
EPDR1-202ENST00000423717 TAF7LQ5H9L4 462 aa28.46■■■□□ 2.15
EPDR1-202ENST00000423717 DPP8Q6V1X1 898 aaPredicted RBP28.46■■■□□ 2.15
EPDR1-202ENST00000423717 MPNDQ8N594 471 aa28.46■■■□□ 2.15
EPDR1-202ENST00000423717 MEIS3Q99687 375 aa28.46■■■□□ 2.15
EPDR1-202ENST00000423717 ZNF277Q9NRM2 450 aaPredicted RBP28.46■■■□□ 2.15
EPDR1-202ENST00000423717 CCDC57Q2TAC2 916 aa28.45■■■□□ 2.14
EPDR1-202ENST00000423717 GRIPAP1Q4V328 841 aa28.45■■■□□ 2.14
EPDR1-202ENST00000423717 ITPRIPQ8IWB1 547 aa28.45■■■□□ 2.14
EPDR1-202ENST00000423717 KAZALD1Q96I82 304 aa28.45■■■□□ 2.14
EPDR1-202ENST00000423717 NSFL1CQ9UNZ2 370 aaKnown RBP28.45■■■□□ 2.14
EPDR1-202ENST00000423717 RTL9Q8NET4 1388 aa28.45■■■□□ 2.14
EPDR1-202ENST00000423717 PRELPP51888 382 aa28.44■■■□□ 2.14
EPDR1-202ENST00000423717 MPHOSPH8Q99549 860 aa28.44■■■□□ 2.14
EPDR1-202ENST00000423717 LTBP3Q9NS15 1303 aa28.43■■■□□ 2.14
EPDR1-202ENST00000423717 GNAI3P08754 354 aa28.43■■■□□ 2.14
EPDR1-202ENST00000423717 MS4A1P11836 297 aa28.43■■■□□ 2.14
EPDR1-202ENST00000423717 GOLGA6L2Q8N9W4 650 aaPredicted RBP28.43■■■□□ 2.14
EPDR1-202ENST00000423717 PANK1Q8TE04 598 aa28.43■■■□□ 2.14
EPDR1-202ENST00000423717 HDAC5Q9UQL6 1122 aa28.43■■■□□ 2.14
EPDR1-202ENST00000423717 RLBP1P12271 317 aa28.42■■■□□ 2.14
EPDR1-202ENST00000423717 PSMD1Q99460 953 aa28.42■■■□□ 2.14
EPDR1-202ENST00000423717 ANKIB1Q9P2G1 1089 aa28.42■■■□□ 2.14
EPDR1-202ENST00000423717 UTRNP46939 3433 aa28.41■■■□□ 2.14
EPDR1-202ENST00000423717 GPSM2P81274 684 aa28.41■■■□□ 2.14
EPDR1-202ENST00000423717 ZNF594Q96JF6 807 aaPredicted RBP28.41■■■□□ 2.14
EPDR1-202ENST00000423717 LRRFIP2Q9Y608 721 aaKnown RBP28.41■■■□□ 2.14
EPDR1-202ENST00000423717 ANKRD44Q8N8A2 993 aa28.4■■■□□ 2.14
EPDR1-202ENST00000423717 SUPT20HQ8NEM7 779 aa28.4■■■□□ 2.14
EPDR1-202ENST00000423717 LRRC37AA6NMS7 1700 aa28.4■■■□□ 2.14
EPDR1-202ENST00000423717 C6orf229H3BNL8 230 aa28.39■■■□□ 2.14
EPDR1-202ENST00000423717 IARSP41252 1262 aaKnown RBP28.39■■■□□ 2.14
EPDR1-202ENST00000423717 ZNF526Q8TF50 670 aaPredicted RBP28.39■■■□□ 2.14
EPDR1-202ENST00000423717 BSDC1Q9NW68 430 aaPredicted RBP28.39■■■□□ 2.14
EPDR1-202ENST00000423717 SNED1Q8TER0 1413 aa28.38■■■□□ 2.13
EPDR1-202ENST00000423717 RABL6Q3YEC7 729 aaPredicted RBP28.37■■■□□ 2.13
EPDR1-202ENST00000423717 LARGE2Q8N3Y3 721 aa28.37■■■□□ 2.13
EPDR1-202ENST00000423717 DICER1Q9UPY3 1922 aaKnown RBP28.37■■■□□ 2.13
Retrieved 100 of 20,778 RNA–protein pairs in 10 ms