RNA–Protein interactions for RNA: ENST00000423141.1

NPC1L1-203, Transcript of NPC1 like intracellular cholesterol transporter 1, humanhuman

TSL 1 (best) BASIC

Gene NPC1L1, Length 2,554 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1L1-203ENST00000423141 USHBP1Q8N6Y0 703 aa19.62■□□□□ 0.73
NPC1L1-203ENST00000423141 ERCC4Q92889 916 aaPredicted RBP19.62■□□□□ 0.73
NPC1L1-203ENST00000423141 GPATCH3Q96I76 525 aa19.62■□□□□ 0.73
NPC1L1-203ENST00000423141 CCDC8Q9H0W5 538 aaPredicted RBP19.62■□□□□ 0.73
NPC1L1-203ENST00000423141 ZNF446Q9NWS9 450 aa19.62■□□□□ 0.73
NPC1L1-203ENST00000423141 SIPA1L2Q9P2F8 1722 aaPredicted RBP19.62■□□□□ 0.73
NPC1L1-203ENST00000423141 FAM53CQ9NYF3 392 aa19.62■□□□□ 0.73
NPC1L1-203ENST00000423141 KCNQ3O43525 872 aa19.61■□□□□ 0.73
NPC1L1-203ENST00000423141 PDIA4P13667 645 aaKnown RBP19.61■□□□□ 0.73
NPC1L1-203ENST00000423141 ANKRD1Q15327 319 aa19.61■□□□□ 0.73
NPC1L1-203ENST00000423141 CCAR2Q8N163 923 aaKnown RBP19.61■□□□□ 0.73
NPC1L1-203ENST00000423141 FBXW7Q969H0 707 aa19.61■□□□□ 0.73
NPC1L1-203ENST00000423141 SYTL4Q96C24 671 aaPredicted RBP19.61■□□□□ 0.73
NPC1L1-203ENST00000423141 FOSBP53539 338 aa19.61■□□□□ 0.73
NPC1L1-203ENST00000423141 EAF2Q96CJ1 260 aaPredicted RBP19.61■□□□□ 0.73
NPC1L1-203ENST00000423141 GOLPH3LQ9H4A5 285 aa19.61■□□□□ 0.73
NPC1L1-203ENST00000423141 DHX40Q8IX18 779 aaKnown RBP19.6■□□□□ 0.73
NPC1L1-203ENST00000423141 LRRN4CLQ8ND94 238 aa19.6■□□□□ 0.73
NPC1L1-203ENST00000423141 ERO1AQ96HE7 468 aa19.6■□□□□ 0.73
NPC1L1-203ENST00000423141 BOLA2Q9H3K6 86 aa19.6■□□□□ 0.73
NPC1L1-203ENST00000423141 TOPAZ1Q8N9V7 1692 aa19.6■□□□□ 0.73
NPC1L1-203ENST00000423141 NUTM2GQ5VZR2 741 aa19.6■□□□□ 0.73
NPC1L1-203ENST00000423141 MTX1Q13505 466 aa19.59■□□□□ 0.73
NPC1L1-203ENST00000423141 FSD1Q9BTV5 496 aa19.59■□□□□ 0.73
NPC1L1-203ENST00000423141 BECN2A8MW95 431 aa19.59■□□□□ 0.73
NPC1L1-203ENST00000423141 EIF4A1P60842 406 aaKnown RBP19.59■□□□□ 0.73
NPC1L1-203ENST00000423141 STX1AQ16623 288 aa19.59■□□□□ 0.73
NPC1L1-203ENST00000423141 GTF3C6Q969F1 213 aa19.59■□□□□ 0.73
NPC1L1-203ENST00000423141 H3BQV1 296 aa19.58■□□□□ 0.73
NPC1L1-203ENST00000423141 NEMFO60524 1076 aa19.58■□□□□ 0.73
NPC1L1-203ENST00000423141 SASH1O94885 1247 aa19.58■□□□□ 0.73
NPC1L1-203ENST00000423141 CAVIN2O95810 425 aa19.58■□□□□ 0.73
NPC1L1-203ENST00000423141 IFFO2Q5TF58 517 aa19.58■□□□□ 0.73
NPC1L1-203ENST00000423141 RNF20Q5VTR2 975 aa19.58■□□□□ 0.73
NPC1L1-203ENST00000423141 SLU7O95391 586 aaKnown RBP19.58■□□□□ 0.72
NPC1L1-203ENST00000423141 CWF19L2Q2TBE0 894 aaKnown RBP19.58■□□□□ 0.72
NPC1L1-203ENST00000423141 CCAR1Q8IX12 1150 aaKnown RBP19.58■□□□□ 0.72
NPC1L1-203ENST00000423141 EDC3Q96F86 508 aaKnown RBP19.58■□□□□ 0.72
NPC1L1-203ENST00000423141 C9orf78Q9NZ63 289 aaPredicted RBP19.58■□□□□ 0.72
NPC1L1-203ENST00000423141 GIGYF1O75420 1035 aaPredicted RBP19.57■□□□□ 0.72
NPC1L1-203ENST00000423141 LGR6Q9HBX8 967 aa19.57■□□□□ 0.72
NPC1L1-203ENST00000423141 ADD1P35611 737 aaKnown RBP19.57■□□□□ 0.72
NPC1L1-203ENST00000423141 ERCC6LQ2NKX8 1250 aa19.57■□□□□ 0.72
NPC1L1-203ENST00000423141 LRRC2Q9BYS8 371 aa19.57■□□□□ 0.72
NPC1L1-203ENST00000423141 SNRKQ9NRH2 765 aa19.57■□□□□ 0.72
NPC1L1-203ENST00000423141 BABAM1Q9NWV8 329 aa19.57■□□□□ 0.72
NPC1L1-203ENST00000423141 NWD1Q149M9 1564 aa19.56■□□□□ 0.72
NPC1L1-203ENST00000423141 MED23Q9ULK4 1368 aa19.56■□□□□ 0.72
NPC1L1-203ENST00000423141 HOXC9P31274 260 aa19.56■□□□□ 0.72
NPC1L1-203ENST00000423141 SNW1Q13573 536 aaKnown RBP19.56■□□□□ 0.72
NPC1L1-203ENST00000423141 PPFIA3O75145 1194 aa19.56■□□□□ 0.72
NPC1L1-203ENST00000423141 CHGBP05060 677 aa19.56■□□□□ 0.72
NPC1L1-203ENST00000423141 IRX5P78411 483 aaPredicted RBP19.56■□□□□ 0.72
NPC1L1-203ENST00000423141 AOPEPQ8N6M6 819 aa19.56■□□□□ 0.72
NPC1L1-203ENST00000423141 ALDH8A1Q9H2A2 487 aaPredicted RBP19.56■□□□□ 0.72
NPC1L1-203ENST00000423141 NBPF11Q86T75 865 aa19.55■□□□□ 0.72
NPC1L1-203ENST00000423141 SIL1Q9H173 461 aa19.55■□□□□ 0.72
NPC1L1-203ENST00000423141 MAP3K2Q9Y2U5 619 aa19.55■□□□□ 0.72
NPC1L1-203ENST00000423141 HIP1O00291 1037 aa19.55■□□□□ 0.72
NPC1L1-203ENST00000423141 HSP90B1P14625 803 aaKnown RBP19.55■□□□□ 0.72
NPC1L1-203ENST00000423141 SLFNL1Q499Z3 407 aa19.55■□□□□ 0.72
NPC1L1-203ENST00000423141 ERC1Q8IUD2 1116 aa19.55■□□□□ 0.72
NPC1L1-203ENST00000423141 CFAP45Q9UL16 551 aa19.55■□□□□ 0.72
NPC1L1-203ENST00000423141 COL15A1P39059 1388 aa19.55■□□□□ 0.72
NPC1L1-203ENST00000423141 CCDC66A2RUB6 948 aa19.54■□□□□ 0.72
NPC1L1-203ENST00000423141 VGLL3A8MV65 326 aa19.54■□□□□ 0.72
NPC1L1-203ENST00000423141 E4F1Q66K89 784 aaPredicted RBP19.54■□□□□ 0.72
NPC1L1-203ENST00000423141 Q6ZUG5 572 aa19.54■□□□□ 0.72
NPC1L1-203ENST00000423141 NGDNQ8NEJ9 315 aaKnown RBP19.54■□□□□ 0.72
NPC1L1-203ENST00000423141 TAF5LO75529 589 aa19.54■□□□□ 0.72
NPC1L1-203ENST00000423141 NLRP6P59044 892 aa19.54■□□□□ 0.72
NPC1L1-203ENST00000423141 PROSER3Q2NL68 480 aa19.54■□□□□ 0.72
NPC1L1-203ENST00000423141 SCRN1Q12765 414 aa19.53■□□□□ 0.72
NPC1L1-203ENST00000423141 KLHDC4Q8TBB5 520 aa19.53■□□□□ 0.72
NPC1L1-203ENST00000423141 KAZALD1Q96I82 304 aa19.53■□□□□ 0.72
NPC1L1-203ENST00000423141 USP28Q96RU2 1077 aa19.53■□□□□ 0.72
NPC1L1-203ENST00000423141 NDUFB9Q9Y6M9 179 aa19.53■□□□□ 0.72
NPC1L1-203ENST00000423141 H2AFXP16104 143 aaPredicted RBP19.52■□□□□ 0.72
NPC1L1-203ENST00000423141 SYT10Q6XYQ8 523 aa19.52■□□□□ 0.72
NPC1L1-203ENST00000423141 SUCLG2Q96I99 432 aa19.52■□□□□ 0.72
NPC1L1-203ENST00000423141 ZSCAN16Q9H4T2 348 aaPredicted RBP19.52■□□□□ 0.72
NPC1L1-203ENST00000423141 NEK1Q96PY6 1258 aa19.52■□□□□ 0.72
NPC1L1-203ENST00000423141 HMG20BQ9P0W2 317 aa19.52■□□□□ 0.72
NPC1L1-203ENST00000423141 CTAGE5O15320 804 aa19.51■□□□□ 0.71
NPC1L1-203ENST00000423141 TSGA10IPQ3SY00 556 aa19.51■□□□□ 0.71
NPC1L1-203ENST00000423141 CCDC129Q6ZRS4 1044 aa19.51■□□□□ 0.71
NPC1L1-203ENST00000423141 ENGASEQ8NFI3 743 aa19.51■□□□□ 0.71
NPC1L1-203ENST00000423141 PPP1R13BQ96KQ4 1090 aa19.51■□□□□ 0.71
NPC1L1-203ENST00000423141 TIGD1Q96MW7 591 aa19.51■□□□□ 0.71
NPC1L1-203ENST00000423141 BICC1Q9H694 974 aaKnown RBP19.51■□□□□ 0.71
NPC1L1-203ENST00000423141 RCOR1Q9UKL0 485 aa19.51■□□□□ 0.71
NPC1L1-203ENST00000423141 FHOD1Q9Y613 1164 aa19.51■□□□□ 0.71
NPC1L1-203ENST00000423141 KINO60870 393 aaKnown RBP19.51■□□□□ 0.71
NPC1L1-203ENST00000423141 CLCN6P51797 869 aa19.51■□□□□ 0.71
NPC1L1-203ENST00000423141 G3BP1Q13283 466 aaKnown RBP eCLIP19.51■□□□□ 0.71
NPC1L1-203ENST00000423141 CCDC73Q6ZRK6 1079 aa19.51■□□□□ 0.71
NPC1L1-203ENST00000423141 L2HGDHQ9H9P8 463 aa19.51■□□□□ 0.71
NPC1L1-203ENST00000423141 ANO10Q9NW15 660 aa19.51■□□□□ 0.71
NPC1L1-203ENST00000423141 CEMIPQ8WUJ3 1361 aa19.51■□□□□ 0.71
NPC1L1-203ENST00000423141 JCADQ9P266 1359 aa19.5■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 84.8 ms