RNA–Protein interactions for RNA: ENST00000422026.1

SSX2IP-202, Transcript of SSX family member 2 interacting protein, humanhuman

TSL 3

Gene SSX2IP, Length 759 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSX2IP-202ENST00000422026 SLC10A5Q5PT55 438 aa17.74■□□□□ 0.43
SSX2IP-202ENST00000422026 BICDL1Q6ZP65 573 aa17.74■□□□□ 0.43
SSX2IP-202ENST00000422026 RIC1Q4ADV7 1423 aa17.73■□□□□ 0.43
SSX2IP-202ENST00000422026 DDX60Q8IY21 1712 aaKnown RBP17.73■□□□□ 0.43
SSX2IP-202ENST00000422026 FAM177BA6PVY3 158 aa17.73■□□□□ 0.43
SSX2IP-202ENST00000422026 IL15P40933 162 aaPredicted RBP17.73■□□□□ 0.43
SSX2IP-202ENST00000422026 FAM161AQ3B820 660 aa17.73■□□□□ 0.43
SSX2IP-202ENST00000422026 SMIM5Q71RC9 77 aa17.73■□□□□ 0.43
SSX2IP-202ENST00000422026 NLGN1Q8N2Q7 840 aa17.73■□□□□ 0.43
SSX2IP-202ENST00000422026 PA2G4Q9UQ80 394 aaKnown RBP17.73■□□□□ 0.43
SSX2IP-202ENST00000422026 AOX1Q06278 1338 aa17.72■□□□□ 0.43
SSX2IP-202ENST00000422026 NPHP1O15259 732 aa17.72■□□□□ 0.43
SSX2IP-202ENST00000422026 NFIXQ14938 502 aa17.72■□□□□ 0.43
SSX2IP-202ENST00000422026 SLC15A2Q16348 729 aa17.72■□□□□ 0.43
SSX2IP-202ENST00000422026 SKAP1Q86WV1 359 aa17.72■□□□□ 0.43
SSX2IP-202ENST00000422026 TUBGCP6Q96RT7 1819 aa17.71■□□□□ 0.43
SSX2IP-202ENST00000422026 EYA2O00167 538 aa17.71■□□□□ 0.43
SSX2IP-202ENST00000422026 SMARCA5O60264 1052 aaPredicted RBP17.71■□□□□ 0.43
SSX2IP-202ENST00000422026 ITGA6P23229 1130 aa17.71■□□□□ 0.43
SSX2IP-202ENST00000422026 NUTM1Q86Y26 1132 aa17.71■□□□□ 0.43
SSX2IP-202ENST00000422026 PLEKHM2Q8IWE5 1019 aa17.71■□□□□ 0.43
SSX2IP-202ENST00000422026 GPATCH3Q96I76 525 aa17.71■□□□□ 0.43
SSX2IP-202ENST00000422026 OSBPL3Q9H4L5 887 aa17.71■□□□□ 0.43
SSX2IP-202ENST00000422026 EP400Q96L91 3159 aa17.71■□□□□ 0.43
SSX2IP-202ENST00000422026 HCLS1P14317 486 aaPredicted RBP17.7■□□□□ 0.42
SSX2IP-202ENST00000422026 ST5P78524 1137 aa17.7■□□□□ 0.42
SSX2IP-202ENST00000422026 SF3B3Q15393 1217 aaKnown RBP17.7■□□□□ 0.42
SSX2IP-202ENST00000422026 ERFEQ4G0M1 354 aa17.7■□□□□ 0.42
SSX2IP-202ENST00000422026 BMP2KLQ5H9B9 411 aa17.7■□□□□ 0.42
SSX2IP-202ENST00000422026 COL23A1Q86Y22 540 aaPredicted RBP17.7■□□□□ 0.42
SSX2IP-202ENST00000422026 SYNE4Q8N205 404 aa17.7■□□□□ 0.42
SSX2IP-202ENST00000422026 CNBD1Q8NA66 436 aa17.7■□□□□ 0.42
SSX2IP-202ENST00000422026 NLRP3Q96P20 1036 aa17.7■□□□□ 0.42
SSX2IP-202ENST00000422026 SIL1Q9H173 461 aa17.7■□□□□ 0.42
SSX2IP-202ENST00000422026 GREM2Q9H772 168 aa17.7■□□□□ 0.42
SSX2IP-202ENST00000422026 PNPLA7Q6ZV29 1317 aa17.7■□□□□ 0.42
SSX2IP-202ENST00000422026 LRP5O75197 1615 aa17.69■□□□□ 0.42
SSX2IP-202ENST00000422026 IFIT2P09913 472 aaKnown RBP17.69■□□□□ 0.42
SSX2IP-202ENST00000422026 MX1P20591 662 aa17.69■□□□□ 0.42
SSX2IP-202ENST00000422026 TM4SF1P30408 202 aa17.69■□□□□ 0.42
SSX2IP-202ENST00000422026 KLHDC4Q8TBB5 520 aa17.69■□□□□ 0.42
SSX2IP-202ENST00000422026 CDC5LQ99459 802 aaKnown RBP17.69■□□□□ 0.42
SSX2IP-202ENST00000422026 IL1RAPL2Q9NP60 686 aa17.69■□□□□ 0.42
SSX2IP-202ENST00000422026 GPR108Q9NPR9 543 aa17.69■□□□□ 0.42
SSX2IP-202ENST00000422026 SASH1O94885 1247 aa17.68■□□□□ 0.42
SSX2IP-202ENST00000422026 STAP2Q9UGK3 403 aa17.68■□□□□ 0.42
SSX2IP-202ENST00000422026 TTC41PQ6P2S7 1318 aa17.68■□□□□ 0.42
SSX2IP-202ENST00000422026 SALL3Q9BXA9 1300 aa17.68■□□□□ 0.42
SSX2IP-202ENST00000422026 ABCC12Q96J65 1359 aa17.67■□□□□ 0.42
SSX2IP-202ENST00000422026 EIF5BO60841 1220 aaKnown RBP17.67■□□□□ 0.42
SSX2IP-202ENST00000422026 IGHMBP2P38935 993 aaKnown RBP17.67■□□□□ 0.42
SSX2IP-202ENST00000422026 PDE1AP54750 535 aa17.67■□□□□ 0.42
SSX2IP-202ENST00000422026 ERC2O15083 957 aa17.66■□□□□ 0.42
SSX2IP-202ENST00000422026 SERPINB2P05120 415 aa17.66■□□□□ 0.42
SSX2IP-202ENST00000422026 TTC22Q5TAA0 569 aa17.66■□□□□ 0.42
SSX2IP-202ENST00000422026 LDHAL6AQ6ZMR3 332 aa17.66■□□□□ 0.42
SSX2IP-202ENST00000422026 ATG9AQ7Z3C6 839 aa17.66■□□□□ 0.42
SSX2IP-202ENST00000422026 DEFB132Q7Z7B7 95 aa17.66■□□□□ 0.42
SSX2IP-202ENST00000422026 AACSQ86V21 672 aa17.66■□□□□ 0.42
SSX2IP-202ENST00000422026 C16orf71Q8IYS4 520 aaPredicted RBP17.66■□□□□ 0.42
SSX2IP-202ENST00000422026 CCDC85AQ96PX6 553 aaPredicted RBP17.66■□□□□ 0.42
SSX2IP-202ENST00000422026 MPHOSPH8Q99549 860 aa17.66■□□□□ 0.42
SSX2IP-202ENST00000422026 ANO8Q9HCE9 1232 aaPredicted RBP17.66■□□□□ 0.42
SSX2IP-202ENST00000422026 CNNM1Q9NRU3 951 aa17.66■□□□□ 0.42
SSX2IP-202ENST00000422026 CEP126Q9P2H0 1117 aa17.66■□□□□ 0.42
SSX2IP-202ENST00000422026 AKAP2Q9Y2D5 859 aa17.66■□□□□ 0.42
SSX2IP-202ENST00000422026 POLRMTO00411 1230 aaKnown RBP17.65■□□□□ 0.42
SSX2IP-202ENST00000422026 TNNI3KQ59H18 835 aa17.65■□□□□ 0.42
SSX2IP-202ENST00000422026 ZNF594Q96JF6 807 aaPredicted RBP17.65■□□□□ 0.42
SSX2IP-202ENST00000422026 FPGT-TNNI3KV9GXZ4 949 aa17.65■□□□□ 0.42
SSX2IP-202ENST00000422026 MROH5Q6ZUA9 1318 aa17.65■□□□□ 0.42
SSX2IP-202ENST00000422026 TFCP2Q12800 502 aa17.64■□□□□ 0.41
SSX2IP-202ENST00000422026 PRR5LQ6MZQ0 368 aa17.64■□□□□ 0.41
SSX2IP-202ENST00000422026 PARP3Q9Y6F1 533 aa17.64■□□□□ 0.41
SSX2IP-202ENST00000422026 GLRX3O76003 335 aaKnown RBP17.63■□□□□ 0.41
SSX2IP-202ENST00000422026 ANKRD18AQ8IVF6 992 aa17.63■□□□□ 0.41
SSX2IP-202ENST00000422026 OTUD7AQ8TE49 926 aaPredicted RBP17.63■□□□□ 0.41
SSX2IP-202ENST00000422026 BCL11AQ9H165 835 aa17.63■□□□□ 0.41
SSX2IP-202ENST00000422026 ECHDC1Q9NTX5 307 aa17.63■□□□□ 0.41
SSX2IP-202ENST00000422026 RIPOR2Q9Y4F9 1068 aa17.63■□□□□ 0.41
SSX2IP-202ENST00000422026 NRXN2Q9P2S2 1712 aa17.63■□□□□ 0.41
SSX2IP-202ENST00000422026 ZNF609O15014 1411 aa17.63■□□□□ 0.41
SSX2IP-202ENST00000422026 DDR1Q08345 913 aa17.62■□□□□ 0.41
SSX2IP-202ENST00000422026 LRRC24Q50LG9 513 aa17.62■□□□□ 0.41
SSX2IP-202ENST00000422026 METTL24Q5JXM2 366 aa17.62■□□□□ 0.41
SSX2IP-202ENST00000422026 DDX46Q7L014 1031 aaKnown RBP17.62■□□□□ 0.41
SSX2IP-202ENST00000422026 SLC16A10Q8TF71 515 aa17.62■□□□□ 0.41
SSX2IP-202ENST00000422026 EAF2Q96CJ1 260 aaPredicted RBP17.62■□□□□ 0.41
SSX2IP-202ENST00000422026 BACH2Q9BYV9 841 aa17.62■□□□□ 0.41
SSX2IP-202ENST00000422026 C8orf34Q49A92 452 aa17.6■□□□□ 0.41
SSX2IP-202ENST00000422026 CASC1Q6TDU7 716 aa17.6■□□□□ 0.41
SSX2IP-202ENST00000422026 PUS3Q9BZE2 481 aaKnown RBP17.6■□□□□ 0.41
SSX2IP-202ENST00000422026 SEC31BQ9NQW1 1179 aa17.6■□□□□ 0.41
SSX2IP-202ENST00000422026 CASZ1Q86V15 1759 aa17.6■□□□□ 0.41
SSX2IP-202ENST00000422026 TNRC6CQ9HCJ0 1690 aaKnown RBP17.59■□□□□ 0.41
SSX2IP-202ENST00000422026 MMP10P09238 476 aa17.59■□□□□ 0.41
SSX2IP-202ENST00000422026 GSPT1P15170 499 aaKnown RBP17.59■□□□□ 0.41
SSX2IP-202ENST00000422026 CRY2Q49AN0 593 aa17.59■□□□□ 0.41
SSX2IP-202ENST00000422026 RPGRQ92834 1020 aaKnown RBP17.59■□□□□ 0.41
SSX2IP-202ENST00000422026 BRIP1Q9BX63 1249 aa17.59■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 114.1 ms