RNA–Protein interactions for RNA: ENST00000420363.5

CPNE1-211, Transcript of copine 1, humanhuman

TSL 2

Gene CPNE1, Length 821 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-211ENST00000420363 FKBP4Q02790 459 aaKnown RBP eCLIP27.29■■□□□ 1.96
CPNE1-211ENST00000420363 GRIPAP1Q4V328 841 aa27.29■■□□□ 1.96
CPNE1-211ENST00000420363 ABCC4O15439 1325 aa27.29■■□□□ 1.96
CPNE1-211ENST00000420363 IRS4O14654 1257 aaPredicted RBP27.28■■□□□ 1.96
CPNE1-211ENST00000420363 SF3B3Q15393 1217 aaKnown RBP27.28■■□□□ 1.96
CPNE1-211ENST00000420363 CHADLQ6NUI6 762 aa27.28■■□□□ 1.96
CPNE1-211ENST00000420363 DNAAF4Q8WXU2 420 aa27.28■■□□□ 1.96
CPNE1-211ENST00000420363 LRRC37AA6NMS7 1700 aa27.27■■□□□ 1.96
CPNE1-211ENST00000420363 CDHR2Q9BYE9 1310 aa27.27■■□□□ 1.96
CPNE1-211ENST00000420363 IQCA1LA6NCM1 817 aa27.27■■□□□ 1.96
CPNE1-211ENST00000420363 PPEF1O14829 653 aaPredicted RBP27.27■■□□□ 1.96
CPNE1-211ENST00000420363 CDCA7LQ96GN5 454 aa27.27■■□□□ 1.96
CPNE1-211ENST00000420363 ZNF277Q9NRM2 450 aaPredicted RBP27.27■■□□□ 1.96
CPNE1-211ENST00000420363 MYH3P11055 1940 aa27.26■■□□□ 1.95
CPNE1-211ENST00000420363 NEURL1BA8MQ27 555 aa27.26■■□□□ 1.95
CPNE1-211ENST00000420363 CT47B1P0C2W7 299 aaPredicted RBP27.26■■□□□ 1.95
CPNE1-211ENST00000420363 OLFM4Q6UX06 510 aa27.26■■□□□ 1.95
CPNE1-211ENST00000420363 DDX46Q7L014 1031 aaKnown RBP27.26■■□□□ 1.95
CPNE1-211ENST00000420363 GRAPQ13588 217 aa27.24■■□□□ 1.95
CPNE1-211ENST00000420363 TMC4Q7Z404 712 aa27.24■■□□□ 1.95
CPNE1-211ENST00000420363 LINS1Q8NG48 757 aa27.24■■□□□ 1.95
CPNE1-211ENST00000420363 GRAPLQ8TC17 118 aaPredicted RBP27.24■■□□□ 1.95
CPNE1-211ENST00000420363 PSMD1Q99460 953 aa27.24■■□□□ 1.95
CPNE1-211ENST00000420363 BBOX1O75936 387 aa27.23■■□□□ 1.95
CPNE1-211ENST00000420363 POTEIP0CG38 1075 aa27.23■■□□□ 1.95
CPNE1-211ENST00000420363 POTEJP0CG39 1038 aa27.23■■□□□ 1.95
CPNE1-211ENST00000420363 ATP6V0A2Q9Y487 856 aa27.23■■□□□ 1.95
CPNE1-211ENST00000420363 CWF19L2Q2TBE0 894 aaKnown RBP27.22■■□□□ 1.95
CPNE1-211ENST00000420363 RTL5Q5HYW3 569 aaPredicted RBP27.22■■□□□ 1.95
CPNE1-211ENST00000420363 COL13A1Q5TAT6 717 aaPredicted RBP27.22■■□□□ 1.95
CPNE1-211ENST00000420363 L3MBTL3Q96JM7 780 aaPredicted RBP27.22■■□□□ 1.95
CPNE1-211ENST00000420363 TAF1P21675 1872 aa27.21■■□□□ 1.95
CPNE1-211ENST00000420363 PCNTO95613 3336 aa27.21■■□□□ 1.95
CPNE1-211ENST00000420363 ALDH1L2Q3SY69 923 aa27.21■■□□□ 1.95
CPNE1-211ENST00000420363 TAF1DQ9H5J8 278 aaPredicted RBP27.21■■□□□ 1.95
CPNE1-211ENST00000420363 PDE8AO60658 829 aa27.2■■□□□ 1.94
CPNE1-211ENST00000420363 IARSP41252 1262 aaKnown RBP27.2■■□□□ 1.94
CPNE1-211ENST00000420363 GCKRQ14397 625 aa27.2■■□□□ 1.94
CPNE1-211ENST00000420363 LDHDQ86WU2 507 aa27.19■■□□□ 1.94
CPNE1-211ENST00000420363 MRPL50Q8N5N7 158 aaKnown RBP27.19■■□□□ 1.94
CPNE1-211ENST00000420363 TMX4Q9H1E5 349 aaPredicted RBP27.19■■□□□ 1.94
CPNE1-211ENST00000420363 CREBZFQ9NS37 354 aa27.19■■□□□ 1.94
CPNE1-211ENST00000420363 PTPRCP08575 1304 aa27.18■■□□□ 1.94
CPNE1-211ENST00000420363 ZNF541Q9H0D2 1346 aa27.18■■□□□ 1.94
CPNE1-211ENST00000420363 CCDC152Q4G0S7 254 aa27.18■■□□□ 1.94
CPNE1-211ENST00000420363 SP8Q8IXZ3 490 aa27.18■■□□□ 1.94
CPNE1-211ENST00000420363 F6X3S4 739 aa27.17■■□□□ 1.94
CPNE1-211ENST00000420363 H7C1W4 665 aa27.17■■□□□ 1.94
CPNE1-211ENST00000420363 EAPPQ56P03 285 aaPredicted RBP27.17■■□□□ 1.94
CPNE1-211ENST00000420363 BEND3Q5T5X7 828 aa27.17■■□□□ 1.94
CPNE1-211ENST00000420363 JDP2Q8WYK2 163 aa27.17■■□□□ 1.94
CPNE1-211ENST00000420363 SSH1Q8WYL5 1049 aa27.17■■□□□ 1.94
CPNE1-211ENST00000420363 HACL1Q9UJ83 578 aa27.17■■□□□ 1.94
CPNE1-211ENST00000420363 COL4A1P02462 1669 aa27.17■■□□□ 1.94
CPNE1-211ENST00000420363 HSPA1AP0DMV8 641 aaKnown RBP27.16■■□□□ 1.94
CPNE1-211ENST00000420363 HSPA1BP0DMV9 641 aaKnown RBP27.16■■□□□ 1.94
CPNE1-211ENST00000420363 CTSWP56202 376 aa27.16■■□□□ 1.94
CPNE1-211ENST00000420363 HNRNPUQ00839 825 aaKnown RBP eCLIP27.16■■□□□ 1.94
CPNE1-211ENST00000420363 CLEC11AQ9Y240 323 aa27.16■■□□□ 1.94
CPNE1-211ENST00000420363 RTL9Q8NET4 1388 aa27.16■■□□□ 1.94
CPNE1-211ENST00000420363 FZD9O00144 591 aa27.15■■□□□ 1.94
CPNE1-211ENST00000420363 UBE3BQ7Z3V4 1068 aa27.15■■□□□ 1.94
CPNE1-211ENST00000420363 PLA2G12BQ9BX93 195 aa27.15■■□□□ 1.94
CPNE1-211ENST00000420363 LTBP1Q14766 1721 aa27.15■■□□□ 1.94
CPNE1-211ENST00000420363 DUOX1Q9NRD9 1551 aa27.14■■□□□ 1.94
CPNE1-211ENST00000420363 CASP7P55210 303 aa27.14■■□□□ 1.94
CPNE1-211ENST00000420363 CELF1Q92879 486 aaKnown RBP27.14■■□□□ 1.94
CPNE1-211ENST00000420363 RTFDC1Q9BY42 306 aaPredicted RBP27.14■■□□□ 1.94
CPNE1-211ENST00000420363 MKRN1Q9UHC7 482 aaKnown RBP27.14■■□□□ 1.94
CPNE1-211ENST00000420363 ALDH1L1O75891 902 aa27.13■■□□□ 1.93
CPNE1-211ENST00000420363 EPHX2P34913 555 aa27.13■■□□□ 1.93
CPNE1-211ENST00000420363 JARID2Q92833 1246 aaPredicted RBP27.13■■□□□ 1.93
CPNE1-211ENST00000420363 VPS33BQ9H267 617 aa27.13■■□□□ 1.93
CPNE1-211ENST00000420363 BRPF1P55201 1214 aaPredicted RBP27.12■■□□□ 1.93
CPNE1-211ENST00000420363 SLC51AQ86UW1 340 aa27.12■■□□□ 1.93
CPNE1-211ENST00000420363 PNMA8AQ86V59 439 aaPredicted RBP27.12■■□□□ 1.93
CPNE1-211ENST00000420363 GPC2Q8N158 579 aa27.12■■□□□ 1.93
CPNE1-211ENST00000420363 ZBED9Q6R2W3 1325 aa27.12■■□□□ 1.93
CPNE1-211ENST00000420363 SCN4AP35499 1836 aa27.11■■□□□ 1.93
CPNE1-211ENST00000420363 EIF6P56537 245 aaKnown RBP27.11■■□□□ 1.93
CPNE1-211ENST00000420363 TNS4Q8IZW8 715 aa27.11■■□□□ 1.93
CPNE1-211ENST00000420363 SUPT20HQ8NEM7 779 aa27.11■■□□□ 1.93
CPNE1-211ENST00000420363 SMC4Q9NTJ3 1288 aa27.11■■□□□ 1.93
CPNE1-211ENST00000420363 RPS8P62241 208 aaKnown RBP27.1■■□□□ 1.93
CPNE1-211ENST00000420363 DPP8Q6V1X1 898 aaPredicted RBP27.1■■□□□ 1.93
CPNE1-211ENST00000420363 TTLL11Q8NHH1 800 aa27.1■■□□□ 1.93
CPNE1-211ENST00000420363 SRCIN1Q9C0H9 1055 aa27.1■■□□□ 1.93
CPNE1-211ENST00000420363 COL4A5P29400 1685 aa27.1■■□□□ 1.93
CPNE1-211ENST00000420363 PASKQ96RG2 1323 aa27.1■■□□□ 1.93
CPNE1-211ENST00000420363 MPNDQ8N594 471 aa27.09■■□□□ 1.93
CPNE1-211ENST00000420363 SEC31BQ9NQW1 1179 aa27.09■■□□□ 1.93
CPNE1-211ENST00000420363 GJA3Q9Y6H8 435 aa27.09■■□□□ 1.93
CPNE1-211ENST00000420363 ITGBL1O95965 494 aaPredicted RBP27.08■■□□□ 1.93
CPNE1-211ENST00000420363 LARGE2Q8N3Y3 721 aa27.08■■□□□ 1.93
CPNE1-211ENST00000420363 CDC5LQ99459 802 aaKnown RBP27.08■■□□□ 1.93
CPNE1-211ENST00000420363 BCL2L13Q9BXK5 485 aa27.08■■□□□ 1.93
CPNE1-211ENST00000420363 TMEM88BA6NKF7 163 aa27.07■■□□□ 1.92
CPNE1-211ENST00000420363 GRM8O00222 908 aa27.07■■□□□ 1.92
CPNE1-211ENST00000420363 SLC4A10Q6U841 1118 aa27.07■■□□□ 1.92
CPNE1-211ENST00000420363 SPEF2Q9C093 1822 aa27.06■■□□□ 1.92
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms