RNA–Protein interactions for RNA: ENST00000418457.6

VPS41-206, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 5

Gene VPS41, Length 532 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-206ENST00000418457 ZNF438Q7Z4V0 828 aa4.65□□□□□ -1.67
VPS41-206ENST00000418457 DMRTB1Q96MA1 342 aa4.65□□□□□ -1.67
VPS41-206ENST00000418457 FAM129BQ96TA1 746 aa4.65□□□□□ -1.67
VPS41-206ENST00000418457 AVENQ9NQS1 362 aaPredicted RBP4.65□□□□□ -1.67
VPS41-206ENST00000418457 ADAMTS2O95450 1211 aa4.64□□□□□ -1.67
VPS41-206ENST00000418457 MFAP1P55081 439 aaKnown RBP4.64□□□□□ -1.67
VPS41-206ENST00000418457 PCBP4P57723 403 aaKnown RBP4.64□□□□□ -1.67
VPS41-206ENST00000418457 TTC39BQ5VTQ0 682 aaPredicted RBP4.64□□□□□ -1.67
VPS41-206ENST00000418457 TMC7Q7Z402 723 aa4.64□□□□□ -1.67
VPS41-206ENST00000418457 SYT9Q86SS6 491 aa4.64□□□□□ -1.67
VPS41-206ENST00000418457 ASB16Q96NS5 453 aa4.64□□□□□ -1.67
VPS41-206ENST00000418457 OXCT2Q9BYC2 517 aaPredicted RBP4.64□□□□□ -1.67
VPS41-206ENST00000418457 ELP3Q9H9T3 547 aa4.64□□□□□ -1.67
VPS41-206ENST00000418457 PODXL2Q9NZ53 605 aa4.64□□□□□ -1.67
VPS41-206ENST00000418457 ZFATQ9P243 1243 aa4.64□□□□□ -1.67
VPS41-206ENST00000418457 NEURL1BA8MQ27 555 aa4.63□□□□□ -1.67
VPS41-206ENST00000418457 MMP20O60882 483 aa4.63□□□□□ -1.67
VPS41-206ENST00000418457 SIN3BO75182 1162 aa4.63□□□□□ -1.67
VPS41-206ENST00000418457 MAP3K6O95382 1288 aa4.63□□□□□ -1.67
VPS41-206ENST00000418457 NEFLP07196 543 aa4.63□□□□□ -1.67
VPS41-206ENST00000418457 PSAPP07602 524 aa4.63□□□□□ -1.67
VPS41-206ENST00000418457 ADH6P28332 368 aa4.63□□□□□ -1.67
VPS41-206ENST00000418457 LCE2AQ5TA79 106 aaPredicted RBP4.63□□□□□ -1.67
VPS41-206ENST00000418457 GOLGA6L1Q8N7Z2 621 aa4.63□□□□□ -1.67
VPS41-206ENST00000418457 NIF3L1Q9GZT8 377 aa4.63□□□□□ -1.67
VPS41-206ENST00000418457 ABI2Q9NYB9 513 aaPredicted RBP4.63□□□□□ -1.67
VPS41-206ENST00000418457 TMEM63CQ9P1W3 806 aa4.63□□□□□ -1.67
VPS41-206ENST00000418457 GGA1Q9UJY5 639 aa4.63□□□□□ -1.67
VPS41-206ENST00000418457 GDF2Q9UK05 429 aaPredicted RBP4.63□□□□□ -1.67
VPS41-206ENST00000418457 GPR182O15218 404 aa4.62□□□□□ -1.67
VPS41-206ENST00000418457 PHACTR2O75167 634 aa4.62□□□□□ -1.67
VPS41-206ENST00000418457 TNFRSF21O75509 655 aa4.62□□□□□ -1.67
VPS41-206ENST00000418457 IGHA2P01877 340 aa4.62□□□□□ -1.67
VPS41-206ENST00000418457 SLURP2P0DP57 97 aa4.62□□□□□ -1.67
VPS41-206ENST00000418457 ERCC3P19447 782 aa4.62□□□□□ -1.67
VPS41-206ENST00000418457 TBC1D8BQ0IIM8 1120 aa4.62□□□□□ -1.67
VPS41-206ENST00000418457 SLCO4C1Q6ZQN7 724 aa4.62□□□□□ -1.67
VPS41-206ENST00000418457 DHX32Q7L7V1 743 aaKnown RBP4.62□□□□□ -1.67
VPS41-206ENST00000418457 OR13H1Q8NG92 308 aa4.62□□□□□ -1.67
VPS41-206ENST00000418457 SNX29Q8TEQ0 813 aa4.62□□□□□ -1.67
VPS41-206ENST00000418457 TNFRSF25Q93038 417 aa4.62□□□□□ -1.67
VPS41-206ENST00000418457 ACDQ96AP0 544 aa4.62□□□□□ -1.67
VPS41-206ENST00000418457 ALKBH8Q96BT7 664 aaKnown RBP4.62□□□□□ -1.67
VPS41-206ENST00000418457 UBE2OQ9C0C9 1292 aaKnown RBP4.62□□□□□ -1.67
VPS41-206ENST00000418457 IGFLR1Q9H665 355 aa4.62□□□□□ -1.67
VPS41-206ENST00000418457 TLR7Q9NYK1 1049 aaKnown RBP4.62□□□□□ -1.67
VPS41-206ENST00000418457 CCDC9Q9Y3X0 531 aaKnown RBP4.62□□□□□ -1.67
VPS41-206ENST00000418457 ANKRD33BA6NCL7 494 aa4.61□□□□□ -1.67
VPS41-206ENST00000418457 PHF20L1A8MW92 1017 aa4.61□□□□□ -1.67
VPS41-206ENST00000418457 TREHO43280 583 aa4.61□□□□□ -1.67
VPS41-206ENST00000418457 SOX18P35713 384 aa4.61□□□□□ -1.67
VPS41-206ENST00000418457 PLCB3Q01970 1234 aa4.61□□□□□ -1.67
VPS41-206ENST00000418457 PLAURQ03405 335 aa4.61□□□□□ -1.67
VPS41-206ENST00000418457 DSC3Q14574 896 aa4.61□□□□□ -1.67
VPS41-206ENST00000418457 PCSK7Q16549 785 aa4.61□□□□□ -1.67
VPS41-206ENST00000418457 DNAJC14Q6Y2X3 702 aaPredicted RBP4.61□□□□□ -1.67
VPS41-206ENST00000418457 FCHSD1Q86WN1 690 aa4.61□□□□□ -1.67
VPS41-206ENST00000418457 PMEPA1Q969W9 287 aa4.61□□□□□ -1.67
VPS41-206ENST00000418457 DNAJB12Q9NXW2 375 aaKnown RBP4.61□□□□□ -1.67
VPS41-206ENST00000418457 CNTN3Q9P232 1028 aa4.61□□□□□ -1.67
VPS41-206ENST00000418457 KLF15Q9UIH9 416 aa4.61□□□□□ -1.67
VPS41-206ENST00000418457 FOXD3Q9UJU5 478 aaPredicted RBP4.61□□□□□ -1.67
VPS41-206ENST00000418457 NISCHQ9Y2I1 1504 aa4.61□□□□□ -1.67
VPS41-206ENST00000418457 ELOA3CA0A087WX78 387 aaPredicted RBP4.6□□□□□ -1.67
VPS41-206ENST00000418457 ELOA3DA6NLF2 546 aaPredicted RBP4.6□□□□□ -1.67
VPS41-206ENST00000418457 ADARB2-AS1A8MUL3 147 aa4.6□□□□□ -1.67
VPS41-206ENST00000418457 WIPF1O43516 503 aa4.6□□□□□ -1.67
VPS41-206ENST00000418457 CYP2E1P05181 493 aaPredicted RBP4.6□□□□□ -1.67
VPS41-206ENST00000418457 BCRP11274 1271 aa4.6□□□□□ -1.67
VPS41-206ENST00000418457 HOXD8P13378 290 aaPredicted RBP4.6□□□□□ -1.67
VPS41-206ENST00000418457 ALAS2P22557 587 aa4.6□□□□□ -1.67
VPS41-206ENST00000418457 CES1P23141 567 aa4.6□□□□□ -1.67
VPS41-206ENST00000418457 ADH7P40394 386 aa4.6□□□□□ -1.67
VPS41-206ENST00000418457 NRLP54845 237 aa4.6□□□□□ -1.67
VPS41-206ENST00000418457 GPLD1P80108 840 aa4.6□□□□□ -1.67
VPS41-206ENST00000418457 ORC1Q13415 861 aa4.6□□□□□ -1.67
VPS41-206ENST00000418457 ELOA3BQ3SY89 546 aa4.6□□□□□ -1.67
VPS41-206ENST00000418457 C1orf127Q8N9H9 656 aa4.6□□□□□ -1.67
VPS41-206ENST00000418457 ELOA3Q8NG57 546 aa4.6□□□□□ -1.67
VPS41-206ENST00000418457 TRPM4Q8TD43 1214 aa4.6□□□□□ -1.67
VPS41-206ENST00000418457 EDARADDQ8WWZ3 215 aa4.6□□□□□ -1.67
VPS41-206ENST00000418457 OIP5O43482 229 aa4.59□□□□□ -1.67
VPS41-206ENST00000418457 CPNE3O75131 537 aaKnown RBP4.59□□□□□ -1.67
VPS41-206ENST00000418457 CELA2BP08218 269 aaPredicted RBP4.59□□□□□ -1.67
VPS41-206ENST00000418457 EPXP11678 715 aa4.59□□□□□ -1.67
VPS41-206ENST00000418457 MAPK8P45983 427 aa4.59□□□□□ -1.67
VPS41-206ENST00000418457 MLLT1Q03111 559 aaPredicted RBP4.59□□□□□ -1.67
VPS41-206ENST00000418457 FMR1Q06787 632 aaKnown RBP eCLIP4.59□□□□□ -1.67
VPS41-206ENST00000418457 HYAL2Q12891 473 aa4.59□□□□□ -1.67
VPS41-206ENST00000418457 COL19A1Q14993 1142 aa4.59□□□□□ -1.67
VPS41-206ENST00000418457 LYPD4Q6UWN0 246 aa4.59□□□□□ -1.67
VPS41-206ENST00000418457 C1orf229Q6ZS94 237 aaPredicted RBP4.59□□□□□ -1.67
VPS41-206ENST00000418457 NPAS4Q8IUM7 802 aa4.59□□□□□ -1.67
VPS41-206ENST00000418457 GALNT6Q8NCL4 622 aa4.59□□□□□ -1.67
VPS41-206ENST00000418457 NSUN5Q96P11 429 aaKnown RBP4.59□□□□□ -1.67
VPS41-206ENST00000418457 CSRNP1Q96S65 589 aa4.59□□□□□ -1.67
VPS41-206ENST00000418457 DNAJC25Q9H1X3 360 aa4.59□□□□□ -1.67
VPS41-206ENST00000418457 CHRDQ9H2X0 955 aa4.59□□□□□ -1.67
VPS41-206ENST00000418457 ZFYVE28Q9HCC9 887 aa4.59□□□□□ -1.67
VPS41-206ENST00000418457 KANSL3Q9P2N6 904 aa4.59□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 84.4 ms