RNA–Protein interactions for RNA: ENST00000417946.5

CPS1-202, Transcript of carbamoyl-phosphate synthase 1, humanhuman

TSL 3

Gene CPS1, Length 699 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPS1-202ENST00000417946 ARXQ96QS3 562 aa8.66□□□□□ -1.02
CPS1-202ENST00000417946 CASZ1Q86V15 1759 aa8.66□□□□□ -1.02
CPS1-202ENST00000417946 COL15A1P39059 1388 aa8.65□□□□□ -1.02
CPS1-202ENST00000417946 IL6STP40189 918 aaPredicted RBP8.65□□□□□ -1.02
CPS1-202ENST00000417946 AIMP1Q12904 312 aaKnown RBP8.65□□□□□ -1.02
CPS1-202ENST00000417946 SLC4A10Q6U841 1118 aa8.65□□□□□ -1.02
CPS1-202ENST00000417946 SMIM5Q71RC9 77 aa8.65□□□□□ -1.02
CPS1-202ENST00000417946 SIRT2Q8IXJ6 389 aa8.65□□□□□ -1.02
CPS1-202ENST00000417946 PLBD2Q8NHP8 589 aa8.65□□□□□ -1.02
CPS1-202ENST00000417946 METTL22Q9BUU2 404 aaPredicted RBP8.65□□□□□ -1.02
CPS1-202ENST00000417946 USP44Q9H0E7 712 aa8.65□□□□□ -1.02
CPS1-202ENST00000417946 C1orf115Q9H7X2 142 aa8.65□□□□□ -1.02
CPS1-202ENST00000417946 CCNL1Q9UK58 526 aaPredicted RBP8.65□□□□□ -1.02
CPS1-202ENST00000417946 LHX6Q9UPM6 363 aa8.65□□□□□ -1.02
CPS1-202ENST00000417946 LAMB2P55268 1798 aa8.65□□□□□ -1.02
CPS1-202ENST00000417946 QSER1Q2KHR3 1735 aa8.65□□□□□ -1.03
CPS1-202ENST00000417946 UTYO14607 1347 aa8.64□□□□□ -1.03
CPS1-202ENST00000417946 MAP3K15Q6ZN16 1313 aa8.64□□□□□ -1.03
CPS1-202ENST00000417946 NEURL1BA8MQ27 555 aa8.64□□□□□ -1.03
CPS1-202ENST00000417946 PPP1R37O75864 691 aa8.64□□□□□ -1.03
CPS1-202ENST00000417946 ALDH1L1O75891 902 aa8.64□□□□□ -1.03
CPS1-202ENST00000417946 CAMTA2O94983 1202 aa8.64□□□□□ -1.03
CPS1-202ENST00000417946 IGHDP01880 384 aa8.64□□□□□ -1.03
CPS1-202ENST00000417946 CASP7P55210 303 aa8.64□□□□□ -1.03
CPS1-202ENST00000417946 FOXK1P85037 733 aa8.64□□□□□ -1.03
CPS1-202ENST00000417946 AAMPQ13685 434 aa8.64□□□□□ -1.03
CPS1-202ENST00000417946 CWF19L2Q2TBE0 894 aaKnown RBP8.64□□□□□ -1.03
CPS1-202ENST00000417946 RC3H1Q5TC82 1133 aaKnown RBP8.64□□□□□ -1.03
CPS1-202ENST00000417946 LINS1Q8NG48 757 aa8.64□□□□□ -1.03
CPS1-202ENST00000417946 KAZALD1Q96I82 304 aa8.64□□□□□ -1.03
CPS1-202ENST00000417946 ISCA1Q9BUE6 129 aa8.64□□□□□ -1.03
CPS1-202ENST00000417946 SRCIN1Q9C0H9 1055 aa8.64□□□□□ -1.03
CPS1-202ENST00000417946 ZBTB3Q9H5J0 574 aa8.64□□□□□ -1.03
CPS1-202ENST00000417946 GPHNQ9NQX3 736 aaPredicted RBP8.64□□□□□ -1.03
CPS1-202ENST00000417946 DDX60Q8IY21 1712 aaKnown RBP8.63□□□□□ -1.03
CPS1-202ENST00000417946 PLSCR1O15162 318 aa8.63□□□□□ -1.03
CPS1-202ENST00000417946 NBPF7P0C2Y1 421 aaPredicted RBP8.63□□□□□ -1.03
CPS1-202ENST00000417946 HLFQ16534 295 aa8.63□□□□□ -1.03
CPS1-202ENST00000417946 TXNRD1Q16881 649 aa8.63□□□□□ -1.03
CPS1-202ENST00000417946 PTCD2Q8WV60 388 aaKnown RBP8.63□□□□□ -1.03
CPS1-202ENST00000417946 MYD88Q99836 296 aa8.63□□□□□ -1.03
CPS1-202ENST00000417946 BCL2L12Q9HB09 334 aa8.63□□□□□ -1.03
CPS1-202ENST00000417946 DDX58O95786 925 aaKnown RBP8.62□□□□□ -1.03
CPS1-202ENST00000417946 HDAC1Q13547 482 aaPredicted RBP8.62□□□□□ -1.03
CPS1-202ENST00000417946 GCKRQ14397 625 aa8.62□□□□□ -1.03
CPS1-202ENST00000417946 ZNF827Q17R98 1081 aa8.62□□□□□ -1.03
CPS1-202ENST00000417946 SLC27A3Q5K4L6 730 aa8.62□□□□□ -1.03
CPS1-202ENST00000417946 CEP85Q6P2H3 762 aa8.62□□□□□ -1.03
CPS1-202ENST00000417946 RIC3Q7Z5B4 369 aa8.62□□□□□ -1.03
CPS1-202ENST00000417946 CCDC125Q86Z20 511 aa8.62□□□□□ -1.03
CPS1-202ENST00000417946 TBC1D2BQ9UPU7 963 aa8.62□□□□□ -1.03
CPS1-202ENST00000417946 MYH3P11055 1940 aa8.62□□□□□ -1.03
CPS1-202ENST00000417946 UBN2Q6ZU65 1347 aa8.61□□□□□ -1.03
CPS1-202ENST00000417946 ERVV-1B6SEH8 477 aa8.61□□□□□ -1.03
CPS1-202ENST00000417946 ATP5J2-PTCD1G3V325 749 aa8.61□□□□□ -1.03
CPS1-202ENST00000417946 RPS6KA4O75676 772 aa8.61□□□□□ -1.03
CPS1-202ENST00000417946 TRIM28Q13263 835 aaKnown RBP8.61□□□□□ -1.03
CPS1-202ENST00000417946 TCIRG1Q13488 830 aa8.61□□□□□ -1.03
CPS1-202ENST00000417946 GIGYF2Q6Y7W6 1299 aaKnown RBP8.61□□□□□ -1.03
CPS1-202ENST00000417946 SKAP1Q86WV1 359 aa8.61□□□□□ -1.03
CPS1-202ENST00000417946 DZIP3Q86Y13 1208 aaKnown RBP8.61□□□□□ -1.03
CPS1-202ENST00000417946 PLPP6Q8IY26 295 aa8.61□□□□□ -1.03
CPS1-202ENST00000417946 ZNF34Q8IZ26 560 aa8.61□□□□□ -1.03
CPS1-202ENST00000417946 ANKRD44Q8N8A2 993 aa8.61□□□□□ -1.03
CPS1-202ENST00000417946 CCDC136Q96JN2 1154 aa8.61□□□□□ -1.03
CPS1-202ENST00000417946 CAMKK2Q96RR4 588 aa8.61□□□□□ -1.03
CPS1-202ENST00000417946 COL4A1P02462 1669 aa8.61□□□□□ -1.03
CPS1-202ENST00000417946 TNRC6CQ9HCJ0 1690 aaKnown RBP8.6□□□□□ -1.03
CPS1-202ENST00000417946 H7C1W4 665 aa8.6□□□□□ -1.03
CPS1-202ENST00000417946 GRM8O00222 908 aa8.6□□□□□ -1.03
CPS1-202ENST00000417946 ARHGAP33O14559 1287 aa8.6□□□□□ -1.03
CPS1-202ENST00000417946 GNPATO15228 680 aa8.6□□□□□ -1.03
CPS1-202ENST00000417946 APBA3O96018 575 aa8.6□□□□□ -1.03
CPS1-202ENST00000417946 EPHA10Q5JZY3 1008 aa8.6□□□□□ -1.03
CPS1-202ENST00000417946 PPP4R3BQ5MIZ7 849 aa8.6□□□□□ -1.03
CPS1-202ENST00000417946 SUCLG2Q96I99 432 aa8.6□□□□□ -1.03
CPS1-202ENST00000417946 SRP68Q9UHB9 627 aaKnown RBP8.6□□□□□ -1.03
CPS1-202ENST00000417946 ZNF330Q9Y3S2 320 aaPredicted RBP8.6□□□□□ -1.03
CPS1-202ENST00000417946 LRRFIP2Q9Y608 721 aaKnown RBP8.6□□□□□ -1.03
CPS1-202ENST00000417946 LRP5O75197 1615 aa8.6□□□□□ -1.03
CPS1-202ENST00000417946 USP42Q9H9J4 1324 aaKnown RBP8.59□□□□□ -1.03
CPS1-202ENST00000417946 PNMA6EA0A0J9YXQ4 647 aa8.59□□□□□ -1.03
CPS1-202ENST00000417946 GNAI3P08754 354 aa8.59□□□□□ -1.03
CPS1-202ENST00000417946 MTX1Q13505 466 aa8.59□□□□□ -1.03
CPS1-202ENST00000417946 KIF6Q6ZMV9 814 aa8.59□□□□□ -1.03
CPS1-202ENST00000417946 NLRP10Q86W26 655 aa8.59□□□□□ -1.03
CPS1-202ENST00000417946 SMC5Q8IY18 1101 aa8.59□□□□□ -1.03
CPS1-202ENST00000417946 JARID2Q92833 1246 aaPredicted RBP8.59□□□□□ -1.03
CPS1-202ENST00000417946 ANO8Q9HCE9 1232 aaPredicted RBP8.59□□□□□ -1.03
CPS1-202ENST00000417946 NARFQ9UHQ1 456 aa8.59□□□□□ -1.03
CPS1-202ENST00000417946 NRXN2Q9P2S2 1712 aa8.59□□□□□ -1.03
CPS1-202ENST00000417946 GNAI2P04899 355 aa8.58□□□□□ -1.04
CPS1-202ENST00000417946 UBTFL1P0CB47 393 aaPredicted RBP8.58□□□□□ -1.04
CPS1-202ENST00000417946 HMGB2P26583 209 aaKnown RBP8.58□□□□□ -1.04
CPS1-202ENST00000417946 RABL6Q3YEC7 729 aaPredicted RBP8.58□□□□□ -1.04
CPS1-202ENST00000417946 ILDR2Q71H61 639 aa8.58□□□□□ -1.04
CPS1-202ENST00000417946 CENPQQ7L2Z9 268 aaPredicted RBP8.58□□□□□ -1.04
CPS1-202ENST00000417946 CCDC191Q8NCU4 936 aa8.58□□□□□ -1.04
CPS1-202ENST00000417946 ARHGEF1Q92888 912 aaKnown RBP8.58□□□□□ -1.04
CPS1-202ENST00000417946 A0A087WZG4 1122 aa8.57□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms