RNA–Protein interactions for RNA: ENST00000417410.6

SMIM19-203, Transcript of small integral membrane protein 19, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SMIM19, Length 1,466 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM19-203ENST00000417410 CCDC152Q4G0S7 254 aa27.76■■■□□ 2.03
SMIM19-203ENST00000417410 PLA2G12BQ9BX93 195 aa27.76■■■□□ 2.03
SMIM19-203ENST00000417410 GRAPQ13588 217 aa27.75■■■□□ 2.03
SMIM19-203ENST00000417410 CC2D2BQ6DHV5 1058 aa27.75■■■□□ 2.03
SMIM19-203ENST00000417410 GRAPLQ8TC17 118 aaPredicted RBP27.75■■■□□ 2.03
SMIM19-203ENST00000417410 MYH3P11055 1940 aa27.74■■■□□ 2.03
SMIM19-203ENST00000417410 CCDC93Q567U6 631 aa27.74■■■□□ 2.03
SMIM19-203ENST00000417410 PPEF1O14829 653 aaPredicted RBP27.73■■■□□ 2.03
SMIM19-203ENST00000417410 CCT4P50991 539 aaKnown RBP27.73■■■□□ 2.03
SMIM19-203ENST00000417410 CTSWP56202 376 aa27.73■■■□□ 2.03
SMIM19-203ENST00000417410 FRAT1Q92837 279 aaPredicted RBP27.73■■■□□ 2.03
SMIM19-203ENST00000417410 TMX4Q9H1E5 349 aaPredicted RBP27.73■■■□□ 2.03
SMIM19-203ENST00000417410 GRIPAP1Q4V328 841 aa27.72■■■□□ 2.03
SMIM19-203ENST00000417410 FER1L6Q2WGJ9 1857 aa27.71■■■□□ 2.03
SMIM19-203ENST00000417410 TMC4Q7Z404 712 aa27.71■■■□□ 2.03
SMIM19-203ENST00000417410 RTKN2Q8IZC4 609 aa27.71■■■□□ 2.03
SMIM19-203ENST00000417410 TTLL11Q8NHH1 800 aa27.71■■■□□ 2.03
SMIM19-203ENST00000417410 YY1P25490 414 aa27.7■■■□□ 2.03
SMIM19-203ENST00000417410 ATF7IPQ6VMQ6 1270 aa27.7■■■□□ 2.03
SMIM19-203ENST00000417410 RCAN3Q9UKA8 241 aa27.7■■■□□ 2.03
SMIM19-203ENST00000417410 UTYO14607 1347 aa27.7■■■□□ 2.02
SMIM19-203ENST00000417410 TAF1P21675 1872 aa27.7■■■□□ 2.02
SMIM19-203ENST00000417410 NFKBIEO00221 500 aa27.7■■■□□ 2.02
SMIM19-203ENST00000417410 ZKSCAN2Q63HK3 967 aa27.7■■■□□ 2.02
SMIM19-203ENST00000417410 ATP6V0A2Q9Y487 856 aa27.7■■■□□ 2.02
SMIM19-203ENST00000417410 UTRNP46939 3433 aa27.69■■■□□ 2.02
SMIM19-203ENST00000417410 LTBP3Q9NS15 1303 aa27.69■■■□□ 2.02
SMIM19-203ENST00000417410 SP8Q8IXZ3 490 aa27.69■■■□□ 2.02
SMIM19-203ENST00000417410 SBF1O95248 1867 aa27.68■■■□□ 2.02
SMIM19-203ENST00000417410 CSF1RP07333 972 aa27.68■■■□□ 2.02
SMIM19-203ENST00000417410 TRIM27P14373 513 aa27.68■■■□□ 2.02
SMIM19-203ENST00000417410 RPS8P62241 208 aaKnown RBP27.68■■■□□ 2.02
SMIM19-203ENST00000417410 RASSF7Q02833 373 aa27.68■■■□□ 2.02
SMIM19-203ENST00000417410 OLFM4Q6UX06 510 aa27.68■■■□□ 2.02
SMIM19-203ENST00000417410 CELF1Q92879 486 aaKnown RBP27.68■■■□□ 2.02
SMIM19-203ENST00000417410 CCDC85AQ96PX6 553 aaPredicted RBP27.68■■■□□ 2.02
SMIM19-203ENST00000417410 TAOK3Q9H2K8 898 aa27.68■■■□□ 2.02
SMIM19-203ENST00000417410 SEC31BQ9NQW1 1179 aa27.68■■■□□ 2.02
SMIM19-203ENST00000417410 RTL9Q8NET4 1388 aa27.66■■■□□ 2.02
SMIM19-203ENST00000417410 NBPF7P0C2Y1 421 aaPredicted RBP27.66■■■□□ 2.02
SMIM19-203ENST00000417410 USP44Q9H0E7 712 aa27.66■■■□□ 2.02
SMIM19-203ENST00000417410 LMNB1P20700 586 aa27.65■■■□□ 2.02
SMIM19-203ENST00000417410 FOXO4P98177 505 aa27.65■■■□□ 2.02
SMIM19-203ENST00000417410 FKBP4Q02790 459 aaKnown RBP eCLIP27.65■■■□□ 2.02
SMIM19-203ENST00000417410 C9orf131Q5VYM1 1079 aa27.65■■■□□ 2.02
SMIM19-203ENST00000417410 INTS3Q68E01 1043 aaKnown RBP27.65■■■□□ 2.02
SMIM19-203ENST00000417410 CDC5LQ99459 802 aaKnown RBP27.65■■■□□ 2.02
SMIM19-203ENST00000417410 GREM2Q9H772 168 aa27.64■■■□□ 2.02
SMIM19-203ENST00000417410 CCDC88AQ3V6T2 1871 aa27.64■■■□□ 2.01
SMIM19-203ENST00000417410 ANKRD18AQ8IVF6 992 aa27.64■■■□□ 2.01
SMIM19-203ENST00000417410 PSMD1Q99460 953 aa27.64■■■□□ 2.01
SMIM19-203ENST00000417410 RNF181Q9P0P0 153 aa27.64■■■□□ 2.01
SMIM19-203ENST00000417410 SNED1Q8TER0 1413 aa27.63■■■□□ 2.01
SMIM19-203ENST00000417410 SUCLG2Q96I99 432 aa27.63■■■□□ 2.01
SMIM19-203ENST00000417410 CLUAP1Q96AJ1 413 aa27.62■■■□□ 2.01
SMIM19-203ENST00000417410 ITGA6P23229 1130 aa27.61■■■□□ 2.01
SMIM19-203ENST00000417410 EPHA10Q5JZY3 1008 aa27.61■■■□□ 2.01
SMIM19-203ENST00000417410 LMBR1LQ6UX01 489 aa27.61■■■□□ 2.01
SMIM19-203ENST00000417410 HDAC5Q9UQL6 1122 aa27.61■■■□□ 2.01
SMIM19-203ENST00000417410 PRELPP51888 382 aa27.6■■■□□ 2.01
SMIM19-203ENST00000417410 MPNDQ8N594 471 aa27.6■■■□□ 2.01
SMIM19-203ENST00000417410 TNNQ9UQP3 1299 aa27.6■■■□□ 2.01
SMIM19-203ENST00000417410 ANKRD18BA2A2Z9 1011 aa27.59■■■□□ 2.01
SMIM19-203ENST00000417410 FAM161AQ3B820 660 aa27.59■■■□□ 2.01
SMIM19-203ENST00000417410 KAZALD1Q96I82 304 aa27.59■■■□□ 2.01
SMIM19-203ENST00000417410 UBTFL1P0CB47 393 aaPredicted RBP27.58■■■□□ 2.01
SMIM19-203ENST00000417410 IFIT5Q13325 482 aaKnown RBP27.58■■■□□ 2.01
SMIM19-203ENST00000417410 DPP8Q6V1X1 898 aaPredicted RBP27.58■■■□□ 2.01
SMIM19-203ENST00000417410 DZIP1LQ8IYY4 767 aaKnown RBP27.58■■■□□ 2.01
SMIM19-203ENST00000417410 SUPT20HQ8NEM7 779 aa27.58■■■□□ 2.01
SMIM19-203ENST00000417410 CHMP3Q9Y3E7 222 aa27.58■■■□□ 2.01
SMIM19-203ENST00000417410 COL4A1P02462 1669 aa27.58■■■□□ 2.01
SMIM19-203ENST00000417410 LRRC37AA6NMS7 1700 aa27.58■■■□□ 2.01
SMIM19-203ENST00000417410 IGHMBP2P38935 993 aaKnown RBP27.57■■■□□ 2
SMIM19-203ENST00000417410 SLC51AQ86UW1 340 aa27.57■■■□□ 2
SMIM19-203ENST00000417410 FTSJ3Q8IY81 847 aaKnown RBP27.57■■■□□ 2
SMIM19-203ENST00000417410 BSDC1Q9NW68 430 aaPredicted RBP27.57■■■□□ 2
SMIM19-203ENST00000417410 DICER1Q9UPY3 1922 aaKnown RBP27.57■■■□□ 2
SMIM19-203ENST00000417410 IRX6P78412 446 aaPredicted RBP27.57■■■□□ 2
SMIM19-203ENST00000417410 CCDC57Q2TAC2 916 aa27.57■■■□□ 2
SMIM19-203ENST00000417410 RTFDC1Q9BY42 306 aaPredicted RBP27.57■■■□□ 2
SMIM19-203ENST00000417410 BICC1Q9H694 974 aaKnown RBP27.57■■■□□ 2
SMIM19-203ENST00000417410 ZC3H4Q9UPT8 1303 aaKnown RBP27.57■■■□□ 2
SMIM19-203ENST00000417410 MS4A1P11836 297 aa27.56■■■□□ 2
SMIM19-203ENST00000417410 RABL6Q3YEC7 729 aaPredicted RBP27.56■■■□□ 2
SMIM19-203ENST00000417410 VPS33BQ9H267 617 aa27.56■■■□□ 2
SMIM19-203ENST00000417410 ZNF277Q9NRM2 450 aaPredicted RBP27.56■■■□□ 2
SMIM19-203ENST00000417410 GNAI3P08754 354 aa27.55■■■□□ 2
SMIM19-203ENST00000417410 IARSP41252 1262 aaKnown RBP27.55■■■□□ 2
SMIM19-203ENST00000417410 RRP1P56182 461 aaKnown RBP27.55■■■□□ 2
SMIM19-203ENST00000417410 TMEM57Q8N5G2 664 aa27.55■■■□□ 2
SMIM19-203ENST00000417410 NSFL1CQ9UNZ2 370 aaKnown RBP27.55■■■□□ 2
SMIM19-203ENST00000417410 MPHOSPH8Q99549 860 aa27.54■■■□□ 2
SMIM19-203ENST00000417410 ANKRD44Q8N8A2 993 aa27.53■■■□□ 2
SMIM19-203ENST00000417410 MEIS3Q99687 375 aa27.53■■■□□ 2
SMIM19-203ENST00000417410 GPSM2P81274 684 aa27.52■■■□□ 2
SMIM19-203ENST00000417410 PODXL2Q9NZ53 605 aa27.52■■■□□ 2
SMIM19-203ENST00000417410 ANKIB1Q9P2G1 1089 aa27.51■■■□□ 2
SMIM19-203ENST00000417410 SPEF2Q9C093 1822 aa27.51■■■□□ 2
SMIM19-203ENST00000417410 TAF7LQ5H9L4 462 aa27.51■■□□□ 1.99
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms