RNA–Protein interactions for RNA: ENST00000417403.5

ABCA13-202, Transcript of ATP binding cassette subfamily A member 13, humanhuman

TSL 2

Gene ABCA13, Length 3,528 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA13-202ENST00000417403 ANKRD45Q5TZF3 282 aa8.36□□□□□ -1.07
ABCA13-202ENST00000417403 SUSD4Q5VX71 490 aa8.36□□□□□ -1.07
ABCA13-202ENST00000417403 C3orf67Q6ZVT6 689 aa8.36□□□□□ -1.07
ABCA13-202ENST00000417403 DZIP3Q86Y13 1208 aaKnown RBP8.36□□□□□ -1.07
ABCA13-202ENST00000417403 ABCC12Q96J65 1359 aa8.36□□□□□ -1.07
ABCA13-202ENST00000417403 ZNF609O15014 1411 aa8.36□□□□□ -1.07
ABCA13-202ENST00000417403 A0A087WZG4 1122 aa8.36□□□□□ -1.07
ABCA13-202ENST00000417403 KCTD17Q8N5Z5 321 aa8.36□□□□□ -1.07
ABCA13-202ENST00000417403 VGLL2Q8N8G2 317 aa8.36□□□□□ -1.07
ABCA13-202ENST00000417403 AKT1S1Q96B36 256 aa8.36□□□□□ -1.07
ABCA13-202ENST00000417403 IL25Q9H293 177 aa8.36□□□□□ -1.07
ABCA13-202ENST00000417403 CWC25Q9NXE8 425 aaPredicted RBP8.36□□□□□ -1.07
ABCA13-202ENST00000417403 FOXD4L5Q5VV16 416 aaPredicted RBP8.35□□□□□ -1.07
ABCA13-202ENST00000417403 FOXD4L4Q8WXT5 416 aaPredicted RBP8.35□□□□□ -1.07
ABCA13-202ENST00000417403 RPS6KA4O75676 772 aa8.35□□□□□ -1.07
ABCA13-202ENST00000417403 FAM196AQ6ZSG2 479 aa8.35□□□□□ -1.07
ABCA13-202ENST00000417403 RHPN1Q8TCX5 695 aa8.35□□□□□ -1.07
ABCA13-202ENST00000417403 TLR7Q9NYK1 1049 aaKnown RBP8.35□□□□□ -1.07
ABCA13-202ENST00000417403 RTL9Q8NET4 1388 aa8.34□□□□□ -1.07
ABCA13-202ENST00000417403 PLSCR1O15162 318 aa8.34□□□□□ -1.07
ABCA13-202ENST00000417403 PDE1AP54750 535 aa8.34□□□□□ -1.07
ABCA13-202ENST00000417403 ZNF827Q17R98 1081 aa8.34□□□□□ -1.07
ABCA13-202ENST00000417403 FAM161AQ3B820 660 aa8.34□□□□□ -1.07
ABCA13-202ENST00000417403 TTC22Q5TAA0 569 aa8.34□□□□□ -1.07
ABCA13-202ENST00000417403 PIAS4Q8N2W9 510 aaPredicted RBP8.34□□□□□ -1.07
ABCA13-202ENST00000417403 FAM89AQ96GI7 184 aa8.34□□□□□ -1.07
ABCA13-202ENST00000417403 TRIM37O94972 964 aa8.34□□□□□ -1.07
ABCA13-202ENST00000417403 TSHZ3Q63HK5 1081 aa8.34□□□□□ -1.07
ABCA13-202ENST00000417403 TTLL11Q8NHH1 800 aa8.34□□□□□ -1.07
ABCA13-202ENST00000417403 BRCA1P38398 1863 aaKnown RBP8.34□□□□□ -1.07
ABCA13-202ENST00000417403 TBC1D9BQ66K14 1250 aa8.34□□□□□ -1.07
ABCA13-202ENST00000417403 SLC51AQ86UW1 340 aa8.34□□□□□ -1.07
ABCA13-202ENST00000417403 ARHGEF1Q92888 912 aaKnown RBP8.34□□□□□ -1.07
ABCA13-202ENST00000417403 EAF2Q96CJ1 260 aaPredicted RBP8.33□□□□□ -1.08
ABCA13-202ENST00000417403 KIF2CQ99661 725 aa8.33□□□□□ -1.08
ABCA13-202ENST00000417403 C9orf78Q9NZ63 289 aaPredicted RBP8.33□□□□□ -1.08
ABCA13-202ENST00000417403 SRP68Q9UHB9 627 aaKnown RBP8.33□□□□□ -1.08
ABCA13-202ENST00000417403 CACNA1SQ13698 1873 aa8.33□□□□□ -1.08
ABCA13-202ENST00000417403 DUOX1Q9NRD9 1551 aa8.33□□□□□ -1.08
ABCA13-202ENST00000417403 RAD21O60216 631 aa8.33□□□□□ -1.08
ABCA13-202ENST00000417403 CLEC4GQ6UXB4 293 aa8.33□□□□□ -1.08
ABCA13-202ENST00000417403 LRRCC1Q9C099 1032 aa8.33□□□□□ -1.08
ABCA13-202ENST00000417403 NARFQ9UHQ1 456 aa8.33□□□□□ -1.08
ABCA13-202ENST00000417403 CCNL1Q9UK58 526 aaPredicted RBP8.33□□□□□ -1.08
ABCA13-202ENST00000417403 IRS2Q9Y4H2 1338 aa8.33□□□□□ -1.08
ABCA13-202ENST00000417403 TM4SF1P30408 202 aa8.33□□□□□ -1.08
ABCA13-202ENST00000417403 LMBR1LQ6UX01 489 aa8.33□□□□□ -1.08
ABCA13-202ENST00000417403 PUS3Q9BZE2 481 aaKnown RBP8.33□□□□□ -1.08
ABCA13-202ENST00000417403 LAMA4Q16363 1823 aa8.32□□□□□ -1.08
ABCA13-202ENST00000417403 RAB11FIP3O75154 756 aa8.32□□□□□ -1.08
ABCA13-202ENST00000417403 NEXNQ0ZGT2 675 aa8.32□□□□□ -1.08
ABCA13-202ENST00000417403 LRRC24Q50LG9 513 aa8.32□□□□□ -1.08
ABCA13-202ENST00000417403 AOX1Q06278 1338 aa8.32□□□□□ -1.08
ABCA13-202ENST00000417403 MYH13Q9UKX3 1938 aa8.32□□□□□ -1.08
ABCA13-202ENST00000417403 SLC27A3Q5K4L6 730 aa8.32□□□□□ -1.08
ABCA13-202ENST00000417403 SLC24A3Q9HC58 644 aa8.32□□□□□ -1.08
ABCA13-202ENST00000417403 RIPOR2Q9Y4F9 1068 aa8.32□□□□□ -1.08
ABCA13-202ENST00000417403 CARMIL3Q8ND23 1372 aa8.32□□□□□ -1.08
ABCA13-202ENST00000417403 APBB1O00213 710 aa8.32□□□□□ -1.08
ABCA13-202ENST00000417403 MSH5O43196 834 aa8.32□□□□□ -1.08
ABCA13-202ENST00000417403 SDSP20132 328 aa8.32□□□□□ -1.08
ABCA13-202ENST00000417403 GPTP24298 496 aa8.32□□□□□ -1.08
ABCA13-202ENST00000417403 ZNF594Q96JF6 807 aaPredicted RBP8.32□□□□□ -1.08
ABCA13-202ENST00000417403 CAMKK2Q96RR4 588 aa8.32□□□□□ -1.08
ABCA13-202ENST00000417403 GREM2Q9H772 168 aa8.32□□□□□ -1.08
ABCA13-202ENST00000417403 IL1RAPL2Q9NP60 686 aa8.32□□□□□ -1.08
ABCA13-202ENST00000417403 RXRBP28702 533 aa8.31□□□□□ -1.08
ABCA13-202ENST00000417403 KIF6Q6ZMV9 814 aa8.31□□□□□ -1.08
ABCA13-202ENST00000417403 HMMRO75330 724 aa8.31□□□□□ -1.08
ABCA13-202ENST00000417403 CTSWP56202 376 aa8.31□□□□□ -1.08
ABCA13-202ENST00000417403 RTL5Q5HYW3 569 aaPredicted RBP8.31□□□□□ -1.08
ABCA13-202ENST00000417403 SLC10A5Q5PT55 438 aa8.31□□□□□ -1.08
ABCA13-202ENST00000417403 DBNLQ9UJU6 430 aaKnown RBP8.31□□□□□ -1.08
ABCA13-202ENST00000417403 SNED1Q8TER0 1413 aa8.31□□□□□ -1.08
ABCA13-202ENST00000417403 SURF6O75683 361 aaKnown RBP8.3□□□□□ -1.08
ABCA13-202ENST00000417403 CIAO1O76071 339 aa8.3□□□□□ -1.08
ABCA13-202ENST00000417403 GYS1P13807 737 aa8.3□□□□□ -1.08
ABCA13-202ENST00000417403 TXNRD1Q16881 649 aa8.3□□□□□ -1.08
ABCA13-202ENST00000417403 USPL1Q5W0Q7 1092 aa8.3□□□□□ -1.08
ABCA13-202ENST00000417403 TBC1D9Q6ZT07 1266 aa8.3□□□□□ -1.08
ABCA13-202ENST00000417403 COL1A1P02452 1464 aaPredicted RBP8.3□□□□□ -1.08
ABCA13-202ENST00000417403 KIF1BPQ96EK5 621 aa8.3□□□□□ -1.08
ABCA13-202ENST00000417403 MX1P20591 662 aa8.3□□□□□ -1.08
ABCA13-202ENST00000417403 NUTM1Q86Y26 1132 aa8.3□□□□□ -1.08
ABCA13-202ENST00000417403 IL17RAQ96F46 866 aa8.3□□□□□ -1.08
ABCA13-202ENST00000417403 ANO8Q9HCE9 1232 aaPredicted RBP8.3□□□□□ -1.08
ABCA13-202ENST00000417403 CDK5RAP2Q96SN8 1893 aa8.3□□□□□ -1.08
ABCA13-202ENST00000417403 PNPLA7Q6ZV29 1317 aa8.29□□□□□ -1.08
ABCA13-202ENST00000417403 CHD4Q14839 1912 aa8.29□□□□□ -1.08
ABCA13-202ENST00000417403 WTIPA6NIX2 430 aaPredicted RBP8.29□□□□□ -1.08
ABCA13-202ENST00000417403 GNPATO15228 680 aa8.29□□□□□ -1.08
ABCA13-202ENST00000417403 TFCP2Q12800 502 aa8.29□□□□□ -1.08
ABCA13-202ENST00000417403 AK7Q96M32 723 aa8.29□□□□□ -1.08
ABCA13-202ENST00000417403 FGFR2P21802 821 aa8.29□□□□□ -1.08
ABCA13-202ENST00000417403 ERFEQ4G0M1 354 aa8.29□□□□□ -1.08
ABCA13-202ENST00000417403 TBC1D32Q96NH3 1257 aa8.29□□□□□ -1.08
ABCA13-202ENST00000417403 SNRKQ9NRH2 765 aa8.29□□□□□ -1.08
ABCA13-202ENST00000417403 IRS4O14654 1257 aaPredicted RBP8.29□□□□□ -1.08
ABCA13-202ENST00000417403 DDR1Q08345 913 aa8.29□□□□□ -1.08
ABCA13-202ENST00000417403 HSP90AB3PQ58FF7 597 aa8.29□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms