RNA–Protein interactions for RNA: ENST00000416651.5

NIF3L1-206, Transcript of NGG1 interacting factor 3 like 1, human

TSL 2 BASIC

Gene NIF3L1, Length 967 nt, Biotype protein coding, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NIF3L1-206	ENST00000416651	HACL1	Q9UJ83	578 aa		12.03	□□□□□ -0.48
NIF3L1-206	ENST00000416651	FOSB	P53539	338 aa		12.02	□□□□□ -0.49
NIF3L1-206	ENST00000416651	DGKZ	Q13574	1117 aa		12.02	□□□□□ -0.49
NIF3L1-206	ENST00000416651	C7orf43	Q8WVR3	580 aa		12.02	□□□□□ -0.49
NIF3L1-206	ENST00000416651	WNT2B	Q93097	391 aa		12.02	□□□□□ -0.49
NIF3L1-206	ENST00000416651	COL4A5	P29400	1685 aa		12.02	□□□□□ -0.49
NIF3L1-206	ENST00000416651	HSP90AB1	P08238	724 aa	Known RBP	12.01	□□□□□ -0.49
NIF3L1-206	ENST00000416651	MRPL50	Q8N5N7	158 aa	Known RBP	12.01	□□□□□ -0.49
NIF3L1-206	ENST00000416651	ZBED2	Q9BTP6	218 aa		12.01	□□□□□ -0.49
NIF3L1-206	ENST00000416651	BRIP1	Q9BX63	1249 aa		12.01	□□□□□ -0.49
NIF3L1-206	ENST00000416651	TBC1D2B	Q9UPU7	963 aa		12.01	□□□□□ -0.49
NIF3L1-206	ENST00000416651	SCN11A	Q9UI33	1791 aa		12	□□□□□ -0.49
NIF3L1-206	ENST00000416651	PDE4A	P27815	886 aa		12	□□□□□ -0.49
NIF3L1-206	ENST00000416651	SRGN	P10124	158 aa		11.99	□□□□□ -0.49
NIF3L1-206	ENST00000416651	EPS15	P42566	896 aa		11.99	□□□□□ -0.49
NIF3L1-206	ENST00000416651	PPP1R15B	Q5SWA1	713 aa		11.99	□□□□□ -0.49
NIF3L1-206	ENST00000416651	PDE6B	P35913	854 aa		11.98	□□□□□ -0.49
NIF3L1-206	ENST00000416651	EIF5	P55010	431 aa	Known RBP	11.98	□□□□□ -0.49
NIF3L1-206	ENST00000416651	DLK2	Q6UY11	383 aa		11.98	□□□□□ -0.49
NIF3L1-206	ENST00000416651	ARFGEF2	Q9Y6D5	1785 aa		11.97	□□□□□ -0.49
NIF3L1-206	ENST00000416651	C1orf141	Q5JVX7	400 aa		11.97	□□□□□ -0.49
NIF3L1-206	ENST00000416651	BEGAIN	Q9BUH8	593 aa		11.97	□□□□□ -0.49
NIF3L1-206	ENST00000416651	SLC52A2	Q9HAB3	445 aa		11.97	□□□□□ -0.49
NIF3L1-206	ENST00000416651	TLL2	Q9Y6L7	1015 aa		11.97	□□□□□ -0.49
NIF3L1-206	ENST00000416651	FZD9	O00144	591 aa		11.96	□□□□□ -0.49
NIF3L1-206	ENST00000416651	PIP4K2A	P48426	406 aa	Predicted RBP	11.96	□□□□□ -0.49
NIF3L1-206	ENST00000416651	FKBP4	Q02790	459 aa	Known RBP eCLIP	11.96	□□□□□ -0.49
NIF3L1-206	ENST00000416651	CIAPIN1	Q6FI81	312 aa		11.96	□□□□□ -0.49
NIF3L1-206	ENST00000416651	STYK1	Q6J9G0	422 aa		11.96	□□□□□ -0.49
NIF3L1-206	ENST00000416651	CNKSR1	Q969H4	720 aa		11.96	□□□□□ -0.49
NIF3L1-206	ENST00000416651	ZNF330	Q9Y3S2	320 aa	Predicted RBP	11.96	□□□□□ -0.49
NIF3L1-206	ENST00000416651	GJA3	Q9Y6H8	435 aa		11.96	□□□□□ -0.49
NIF3L1-206	ENST00000416651	SCN7A	Q01118	1682 aa		11.95	□□□□□ -0.5
NIF3L1-206	ENST00000416651	RNMT	O43148	476 aa	Known RBP	11.95	□□□□□ -0.5
NIF3L1-206	ENST00000416651	AMOT	Q4VCS5	1084 aa		11.95	□□□□□ -0.5
NIF3L1-206	ENST00000416651	SULT6B1	Q6IMI4	303 aa		11.95	□□□□□ -0.5
NIF3L1-206	ENST00000416651	SYNE4	Q8N205	404 aa		11.95	□□□□□ -0.5
NIF3L1-206	ENST00000416651	MASTL	Q96GX5	879 aa		11.95	□□□□□ -0.5
NIF3L1-206	ENST00000416651	TRPM7	Q96QT4	1865 aa		11.95	□□□□□ -0.5
NIF3L1-206	ENST00000416651	IARS	P41252	1262 aa	Known RBP	11.94	□□□□□ -0.5
NIF3L1-206	ENST00000416651	ECE1	P42892	770 aa		11.94	□□□□□ -0.5
NIF3L1-206	ENST00000416651	SCNN1D	P51172	638 aa		11.94	□□□□□ -0.5
NIF3L1-206	ENST00000416651	CCDC93	Q567U6	631 aa		11.94	□□□□□ -0.5
NIF3L1-206	ENST00000416651	PNMA8A	Q86V59	439 aa	Predicted RBP	11.94	□□□□□ -0.5
NIF3L1-206	ENST00000416651	CNBD1	Q8NA66	436 aa		11.94	□□□□□ -0.5
NIF3L1-206	ENST00000416651	NBPF3	Q9H094	633 aa		11.94	□□□□□ -0.5
NIF3L1-206	ENST00000416651	CAMTA2	O94983	1202 aa		11.93	□□□□□ -0.5
NIF3L1-206	ENST00000416651	A1BG	P04217	495 aa		11.93	□□□□□ -0.5
NIF3L1-206	ENST00000416651	PRPF38B	Q5VTL8	546 aa	Known RBP	11.93	□□□□□ -0.5
NIF3L1-206	ENST00000416651	ZDHHC16	Q969W1	377 aa		11.93	□□□□□ -0.5
NIF3L1-206	ENST00000416651	ADAM33	Q9BZ11	813 aa		11.93	□□□□□ -0.5
NIF3L1-206	ENST00000416651	SNED1	Q8TER0	1413 aa		11.93	□□□□□ -0.5
NIF3L1-206	ENST00000416651	MRC1	P22897	1456 aa		11.92	□□□□□ -0.5
NIF3L1-206	ENST00000416651	MAP2K2	P36507	400 aa		11.92	□□□□□ -0.5
NIF3L1-206	ENST00000416651	SAPCD2	Q86UD0	394 aa		11.92	□□□□□ -0.5
NIF3L1-206	ENST00000416651	GPC2	Q8N158	579 aa		11.92	□□□□□ -0.5
NIF3L1-206	ENST00000416651	GLIS2	Q9BZE0	524 aa	Predicted RBP	11.92	□□□□□ -0.5
NIF3L1-206	ENST00000416651	FAM177B	A6PVY3	158 aa		11.91	□□□□□ -0.5
NIF3L1-206	ENST00000416651	EVI5	O60447	810 aa		11.91	□□□□□ -0.5
NIF3L1-206	ENST00000416651	CELF2	O95319	508 aa	Known RBP	11.91	□□□□□ -0.5
NIF3L1-206	ENST00000416651	MFSD10	Q14728	455 aa		11.91	□□□□□ -0.5
NIF3L1-206	ENST00000416651	ZNF496	Q96IT1	587 aa	Predicted RBP	11.91	□□□□□ -0.5
NIF3L1-206	ENST00000416651	UBR2	Q8IWV8	1755 aa		11.91	□□□□□ -0.5
NIF3L1-206	ENST00000416651	KCNQ3	O43525	872 aa		11.9	□□□□□ -0.5
NIF3L1-206	ENST00000416651	AKAP4	Q5JQC9	854 aa		11.9	□□□□□ -0.5
NIF3L1-206	ENST00000416651	SETDB2	Q96T68	719 aa		11.9	□□□□□ -0.5
NIF3L1-206	ENST00000416651	ZNF408	Q9H9D4	720 aa		11.9	□□□□□ -0.5
NIF3L1-206	ENST00000416651	PDZRN3	Q9UPQ7	1066 aa		11.9	□□□□□ -0.5
NIF3L1-206	ENST00000416651	SHTN1	A0MZ66	631 aa		11.89	□□□□□ -0.51
NIF3L1-206	ENST00000416651	PRAMEF22	A3QJZ6	481 aa		11.89	□□□□□ -0.51
NIF3L1-206	ENST00000416651	NPHP1	O15259	732 aa		11.89	□□□□□ -0.51
NIF3L1-206	ENST00000416651	IL13	P35225	146 aa		11.89	□□□□□ -0.51
NIF3L1-206	ENST00000416651	BRPF1	P55201	1214 aa	Predicted RBP	11.89	□□□□□ -0.51
NIF3L1-206	ENST00000416651	SOGA3	Q5TF21	947 aa		11.89	□□□□□ -0.51
NIF3L1-206	ENST00000416651	DDX27	Q96GQ7	796 aa	Known RBP	11.89	□□□□□ -0.51
NIF3L1-206	ENST00000416651	LARP6	Q9BRS8	491 aa	Known RBP	11.89	□□□□□ -0.51
NIF3L1-206	ENST00000416651	BCOR	Q6W2J9	1755 aa		11.88	□□□□□ -0.51
NIF3L1-206	ENST00000416651		A0A087WZG4	1122 aa		11.88	□□□□□ -0.51
NIF3L1-206	ENST00000416651	HMOX1	P09601	288 aa		11.88	□□□□□ -0.51
NIF3L1-206	ENST00000416651	NPR1	P16066	1061 aa		11.88	□□□□□ -0.51
NIF3L1-206	ENST00000416651	ST5	P78524	1137 aa		11.88	□□□□□ -0.51
NIF3L1-206	ENST00000416651	MTHFSD	Q2M296	383 aa	Known RBP	11.88	□□□□□ -0.51
NIF3L1-206	ENST00000416651	VSIG10	Q8N0Z9	540 aa		11.88	□□□□□ -0.51
NIF3L1-206	ENST00000416651	KLRG2	A4D1S0	409 aa	Predicted RBP	11.87	□□□□□ -0.51
NIF3L1-206	ENST00000416651	TCERG1	O14776	1098 aa	Known RBP	11.87	□□□□□ -0.51
NIF3L1-206	ENST00000416651	HIRA	P54198	1017 aa	Predicted RBP	11.87	□□□□□ -0.51
NIF3L1-206	ENST00000416651	NBPF5P	Q86XG9	351 aa	Predicted RBP	11.87	□□□□□ -0.51
NIF3L1-206	ENST00000416651	POLR3GL	Q9BT43	218 aa		11.87	□□□□□ -0.51
NIF3L1-206	ENST00000416651	EIF6	P56537	245 aa	Known RBP	11.86	□□□□□ -0.51
NIF3L1-206	ENST00000416651	HEG1	Q9ULI3	1381 aa		11.85	□□□□□ -0.51
NIF3L1-206	ENST00000416651	FAM155A	B1AL88	458 aa	Predicted RBP	11.85	□□□□□ -0.51
NIF3L1-206	ENST00000416651	CA12	O43570	354 aa		11.85	□□□□□ -0.51
NIF3L1-206	ENST00000416651	TRPA1	O75762	1119 aa		11.85	□□□□□ -0.51
NIF3L1-206	ENST00000416651	STARD3NL	O95772	234 aa		11.85	□□□□□ -0.51
NIF3L1-206	ENST00000416651	LMOD1	P29536	600 aa	Predicted RBP	11.85	□□□□□ -0.51
NIF3L1-206	ENST00000416651	IL6ST	P40189	918 aa	Predicted RBP	11.85	□□□□□ -0.51
NIF3L1-206	ENST00000416651	USP50	Q70EL3	339 aa	Predicted RBP	11.85	□□□□□ -0.51
NIF3L1-206	ENST00000416651	DZIP3	Q86Y13	1208 aa	Known RBP	11.85	□□□□□ -0.51
NIF3L1-206	ENST00000416651	RTKN2	Q8IZC4	609 aa		11.85	□□□□□ -0.51
NIF3L1-206	ENST00000416651	USP16	Q9Y5T5	823 aa		11.85	□□□□□ -0.51

Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms