RNA–Protein interactions for RNA: ENST00000416571.5

MDC1-202, Transcript of mediator of DNA damage checkpoint 1, humanhuman

TSL 3

Gene MDC1, Length 582 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDC1-202ENST00000416571 TNIP1Q15025 636 aa13.17□□□□□ -0.3
MDC1-202ENST00000416571 SLC10A5Q5PT55 438 aa13.17□□□□□ -0.3
MDC1-202ENST00000416571 DDX46Q7L014 1031 aaKnown RBP13.17□□□□□ -0.3
MDC1-202ENST00000416571 SP8Q8IXZ3 490 aa13.17□□□□□ -0.3
MDC1-202ENST00000416571 ZNF408Q9H9D4 720 aa13.17□□□□□ -0.3
MDC1-202ENST00000416571 CA12O43570 354 aa13.16□□□□□ -0.3
MDC1-202ENST00000416571 RAD17O75943 681 aa13.16□□□□□ -0.3
MDC1-202ENST00000416571 AIMP1Q12904 312 aaKnown RBP13.16□□□□□ -0.3
MDC1-202ENST00000416571 SAPCD2Q86UD0 394 aa13.16□□□□□ -0.3
MDC1-202ENST00000416571 RTFDC1Q9BY42 306 aaPredicted RBP13.16□□□□□ -0.3
MDC1-202ENST00000416571 GLIS2Q9BZE0 524 aaPredicted RBP13.16□□□□□ -0.3
MDC1-202ENST00000416571 TSKSQ9UJT2 592 aa13.16□□□□□ -0.3
MDC1-202ENST00000416571 ANXA1P04083 346 aa13.15□□□□□ -0.3
MDC1-202ENST00000416571 HCLS1P14317 486 aaPredicted RBP13.15□□□□□ -0.3
MDC1-202ENST00000416571 KIAA2012Q0VF49 1180 aa13.15□□□□□ -0.3
MDC1-202ENST00000416571 PDIA6Q15084 440 aa13.15□□□□□ -0.3
MDC1-202ENST00000416571 ZC3H15Q8WU90 426 aaKnown RBP13.15□□□□□ -0.3
MDC1-202ENST00000416571 CFAP44Q96MT7 982 aa13.15□□□□□ -0.3
MDC1-202ENST00000416571 TRMT112Q9UI30 125 aaKnown RBP13.15□□□□□ -0.3
MDC1-202ENST00000416571 H7C1D1 291 aa13.14□□□□□ -0.31
MDC1-202ENST00000416571 RIPK4P57078 832 aa13.14□□□□□ -0.31
MDC1-202ENST00000416571 LMOD3Q0VAK6 560 aa13.14□□□□□ -0.31
MDC1-202ENST00000416571 GRAPQ13588 217 aa13.14□□□□□ -0.31
MDC1-202ENST00000416571 PROSER3Q2NL68 480 aa13.14□□□□□ -0.31
MDC1-202ENST00000416571 CDC37L1Q7L3B6 337 aa13.14□□□□□ -0.31
MDC1-202ENST00000416571 COPS6Q7L5N1 327 aa13.14□□□□□ -0.31
MDC1-202ENST00000416571 LRP10Q7Z4F1 713 aa13.14□□□□□ -0.31
MDC1-202ENST00000416571 NLRP10Q86W26 655 aa13.14□□□□□ -0.31
MDC1-202ENST00000416571 GRAPLQ8TC17 118 aaPredicted RBP13.14□□□□□ -0.31
MDC1-202ENST00000416571 NECTIN2Q92692 538 aa13.14□□□□□ -0.31
MDC1-202ENST00000416571 HHIPL1Q96JK4 782 aa13.14□□□□□ -0.31
MDC1-202ENST00000416571 BABAM1Q9NWV8 329 aa13.14□□□□□ -0.31
MDC1-202ENST00000416571 SH3TC1Q8TE82 1336 aa13.13□□□□□ -0.31
MDC1-202ENST00000416571 BRPF1P55201 1214 aaPredicted RBP13.13□□□□□ -0.31
MDC1-202ENST00000416571 TMC4Q7Z404 712 aa13.13□□□□□ -0.31
MDC1-202ENST00000416571 XAGE3Q8WTP9 111 aa13.13□□□□□ -0.31
MDC1-202ENST00000416571 PGAP2Q9UHJ9 254 aa13.13□□□□□ -0.31
MDC1-202ENST00000416571 CNOT7Q9UIV1 285 aaKnown RBP13.13□□□□□ -0.31
MDC1-202ENST00000416571 TCIRG1Q13488 830 aa13.12□□□□□ -0.31
MDC1-202ENST00000416571 TAF1P21675 1872 aa13.12□□□□□ -0.31
MDC1-202ENST00000416571 LRRC37AA6NMS7 1700 aa13.11□□□□□ -0.31
MDC1-202ENST00000416571 HIRAP54198 1017 aaPredicted RBP13.11□□□□□ -0.31
MDC1-202ENST00000416571 NOGQ13253 232 aa13.11□□□□□ -0.31
MDC1-202ENST00000416571 MICALL2Q8IY33 904 aa13.11□□□□□ -0.31
MDC1-202ENST00000416571 TRPM4Q8TD43 1214 aa13.11□□□□□ -0.31
MDC1-202ENST00000416571 CASP8AP2Q9UKL3 1982 aa13.11□□□□□ -0.31
MDC1-202ENST00000416571 HUNKP57058 714 aa13.1□□□□□ -0.31
MDC1-202ENST00000416571 WASHC4Q2M389 1173 aa13.1□□□□□ -0.31
MDC1-202ENST00000416571 USP48Q86UV5 1035 aa13.1□□□□□ -0.31
MDC1-202ENST00000416571 MCOLN1Q9GZU1 580 aa13.1□□□□□ -0.31
MDC1-202ENST00000416571 NSFL1CQ9UNZ2 370 aaKnown RBP13.1□□□□□ -0.31
MDC1-202ENST00000416571 DUOX1Q9NRD9 1551 aa13.1□□□□□ -0.31
MDC1-202ENST00000416571 DDX60Q8IY21 1712 aaKnown RBP13.1□□□□□ -0.31
MDC1-202ENST00000416571 YDJCA8MPS7 323 aa13.09□□□□□ -0.31
MDC1-202ENST00000416571 C6orf229H3BNL8 230 aa13.09□□□□□ -0.31
MDC1-202ENST00000416571 TMPOP42166 694 aaKnown RBP13.09□□□□□ -0.31
MDC1-202ENST00000416571 DGKZQ13574 1117 aa13.09□□□□□ -0.31
MDC1-202ENST00000416571 NEUROD2Q15784 382 aa13.09□□□□□ -0.31
MDC1-202ENST00000416571 DPF2Q92785 391 aa13.09□□□□□ -0.31
MDC1-202ENST00000416571 ZNF428Q96B54 188 aa13.09□□□□□ -0.31
MDC1-202ENST00000416571 DBNDD1Q9H9R9 158 aa13.09□□□□□ -0.31
MDC1-202ENST00000416571 ZBTB12Q9Y330 459 aaPredicted RBP13.09□□□□□ -0.31
MDC1-202ENST00000416571 LAS1LQ9Y4W2 734 aaKnown RBP13.09□□□□□ -0.31
MDC1-202ENST00000416571 SHTN1A0MZ66 631 aa13.08□□□□□ -0.32
MDC1-202ENST00000416571 PSMD14O00487 310 aa13.08□□□□□ -0.32
MDC1-202ENST00000416571 RIMBP2O15034 1052 aa13.08□□□□□ -0.32
MDC1-202ENST00000416571 SAMD7Q7Z3H4 446 aa13.08□□□□□ -0.32
MDC1-202ENST00000416571 KRT26Q7Z3Y9 468 aa13.08□□□□□ -0.32
MDC1-202ENST00000416571 C2orf69Q8N8R5 385 aa13.08□□□□□ -0.32
MDC1-202ENST00000416571 DCPSQ96C86 337 aaKnown RBP13.08□□□□□ -0.32
MDC1-202ENST00000416571 EYA3Q99504 573 aa13.08□□□□□ -0.32
MDC1-202ENST00000416571 CHPF2Q9P2E5 772 aa13.08□□□□□ -0.32
MDC1-202ENST00000416571 RPS12P25398 132 aaKnown RBP13.07□□□□□ -0.32
MDC1-202ENST00000416571 TBC1D10BQ4KMP7 808 aaPredicted RBP13.07□□□□□ -0.32
MDC1-202ENST00000416571 RBM26Q5T8P6 1007 aaKnown RBP13.07□□□□□ -0.32
MDC1-202ENST00000416571 HDGFL1Q5TGJ6 251 aa13.07□□□□□ -0.32
MDC1-202ENST00000416571 RGMBQ6NW40 437 aa13.07□□□□□ -0.32
MDC1-202ENST00000416571 ANKRD13DQ6ZTN6 518 aa13.07□□□□□ -0.32
MDC1-202ENST00000416571 PLBD2Q8NHP8 589 aa13.07□□□□□ -0.32
MDC1-202ENST00000416571 CELF1Q92879 486 aaKnown RBP13.07□□□□□ -0.32
MDC1-202ENST00000416571 FAM89AQ96GI7 184 aa13.07□□□□□ -0.32
MDC1-202ENST00000416571 GBA2Q9HCG7 927 aaPredicted RBP13.07□□□□□ -0.32
MDC1-202ENST00000416571 G3V3G9 751 aa13.06□□□□□ -0.32
MDC1-202ENST00000416571 ECE2O60344 883 aa13.06□□□□□ -0.32
MDC1-202ENST00000416571 SF3B3Q15393 1217 aaKnown RBP13.06□□□□□ -0.32
MDC1-202ENST00000416571 RTL5Q5HYW3 569 aaPredicted RBP13.06□□□□□ -0.32
MDC1-202ENST00000416571 DCAF8Q5TAQ9 597 aa13.06□□□□□ -0.32
MDC1-202ENST00000416571 CCDC102AQ96A19 550 aa13.06□□□□□ -0.32
MDC1-202ENST00000416571 DBF4Q9UBU7 674 aaPredicted RBP13.06□□□□□ -0.32
MDC1-202ENST00000416571 POLR2AP24928 1970 aaKnown RBP13.05□□□□□ -0.32
MDC1-202ENST00000416571 ATP5J2-PTCD1G3V325 749 aa13.05□□□□□ -0.32
MDC1-202ENST00000416571 RALBP1Q15311 655 aa13.05□□□□□ -0.32
MDC1-202ENST00000416571 DOK7Q18PE1 504 aa13.05□□□□□ -0.32
MDC1-202ENST00000416571 KRT24Q2M2I5 525 aa13.05□□□□□ -0.32
MDC1-202ENST00000416571 PRPF38BQ5VTL8 546 aaKnown RBP13.05□□□□□ -0.32
MDC1-202ENST00000416571 ZC3H12CQ9C0D7 883 aaKnown RBP13.05□□□□□ -0.32
MDC1-202ENST00000416571 AKAP11Q9UKA4 1901 aa13.04□□□□□ -0.32
MDC1-202ENST00000416571 ADM5C9JUS6 153 aa13.04□□□□□ -0.32
MDC1-202ENST00000416571 CHL1O00533 1208 aa13.04□□□□□ -0.32
MDC1-202ENST00000416571 HOXB7P09629 217 aa13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms