RNA–Protein interactions for RNA: ENST00000415920.5

CPNE1-209, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 731 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-209ENST00000415920 MAP1SQ66K74 1059 aaPredicted RBP17.32■□□□□ 0.36
CPNE1-209ENST00000415920 LAMB2P55268 1798 aa17.32■□□□□ 0.36
CPNE1-209ENST00000415920 ALDH1B1P30837 517 aa17.31■□□□□ 0.36
CPNE1-209ENST00000415920 VEGFBP49765 207 aa17.31■□□□□ 0.36
CPNE1-209ENST00000415920 SUSD4Q5VX71 490 aa17.31■□□□□ 0.36
CPNE1-209ENST00000415920 COPS6Q7L5N1 327 aa17.31■□□□□ 0.36
CPNE1-209ENST00000415920 CLEC11AQ9Y240 323 aa17.31■□□□□ 0.36
CPNE1-209ENST00000415920 PTPRCP08575 1304 aa17.3■□□□□ 0.36
CPNE1-209ENST00000415920 MYH3P11055 1940 aa17.3■□□□□ 0.36
CPNE1-209ENST00000415920 ERVV-1B6SEH8 477 aa17.3■□□□□ 0.36
CPNE1-209ENST00000415920 DDX58O95786 925 aaKnown RBP17.3■□□□□ 0.36
CPNE1-209ENST00000415920 NOB1Q9ULX3 412 aaKnown RBP17.3■□□□□ 0.36
CPNE1-209ENST00000415920 TMEM88BA6NKF7 163 aa17.29■□□□□ 0.36
CPNE1-209ENST00000415920 FMR1Q06787 632 aaKnown RBP eCLIP17.29■□□□□ 0.36
CPNE1-209ENST00000415920 PSMD1Q99460 953 aa17.29■□□□□ 0.36
CPNE1-209ENST00000415920 RIC1Q4ADV7 1423 aa17.29■□□□□ 0.36
CPNE1-209ENST00000415920 NTSR2O95665 410 aa17.28■□□□□ 0.36
CPNE1-209ENST00000415920 HOXA10P31260 410 aaPredicted RBP17.28■□□□□ 0.36
CPNE1-209ENST00000415920 RIC3Q7Z5B4 369 aa17.28■□□□□ 0.36
CPNE1-209ENST00000415920 ZNF34Q8IZ26 560 aa17.28■□□□□ 0.36
CPNE1-209ENST00000415920 CNTROBQ8N137 903 aa17.28■□□□□ 0.36
CPNE1-209ENST00000415920 GPC2Q8N158 579 aa17.28■□□□□ 0.36
CPNE1-209ENST00000415920 NYXQ9GZU5 481 aa17.28■□□□□ 0.36
CPNE1-209ENST00000415920 GJA3Q9Y6H8 435 aa17.28■□□□□ 0.36
CPNE1-209ENST00000415920 IBTKQ9P2D0 1353 aaPredicted RBP17.28■□□□□ 0.36
CPNE1-209ENST00000415920 ZKSCAN2Q63HK3 967 aa17.27■□□□□ 0.36
CPNE1-209ENST00000415920 RPGRQ92834 1020 aaKnown RBP17.27■□□□□ 0.36
CPNE1-209ENST00000415920 PI4KAP2A4QPH2 592 aa17.26■□□□□ 0.35
CPNE1-209ENST00000415920 SCNN1DP51172 638 aa17.26■□□□□ 0.35
CPNE1-209ENST00000415920 BRPF1P55201 1214 aaPredicted RBP17.26■□□□□ 0.35
CPNE1-209ENST00000415920 PI4KAP1Q8N8J0 262 aa17.26■□□□□ 0.35
CPNE1-209ENST00000415920 GOLGA6L2Q8N9W4 650 aaPredicted RBP17.26■□□□□ 0.35
CPNE1-209ENST00000415920 PLBD2Q8NHP8 589 aa17.26■□□□□ 0.35
CPNE1-209ENST00000415920 MAP3K2Q9Y2U5 619 aa17.26■□□□□ 0.35
CPNE1-209ENST00000415920 DDX60Q8IY21 1712 aaKnown RBP17.26■□□□□ 0.35
CPNE1-209ENST00000415920 F6X3S4 739 aa17.25■□□□□ 0.35
CPNE1-209ENST00000415920 PPEF1O14829 653 aaPredicted RBP17.25■□□□□ 0.35
CPNE1-209ENST00000415920 IPO8O15397 1037 aaKnown RBP17.25■□□□□ 0.35
CPNE1-209ENST00000415920 PLIN1O60240 522 aa17.25■□□□□ 0.35
CPNE1-209ENST00000415920 EPS15P42566 896 aa17.25■□□□□ 0.35
CPNE1-209ENST00000415920 RRP1P56182 461 aaKnown RBP17.25■□□□□ 0.35
CPNE1-209ENST00000415920 SLC4A10Q6U841 1118 aa17.25■□□□□ 0.35
CPNE1-209ENST00000415920 KSR2Q6VAB6 950 aa17.25■□□□□ 0.35
CPNE1-209ENST00000415920 ANKRD13DQ6ZTN6 518 aa17.25■□□□□ 0.35
CPNE1-209ENST00000415920 FTSJ3Q8IY81 847 aaKnown RBP17.25■□□□□ 0.35
CPNE1-209ENST00000415920 JDP2Q8WYK2 163 aa17.25■□□□□ 0.35
CPNE1-209ENST00000415920 API5Q9BZZ5 524 aaKnown RBP17.25■□□□□ 0.35
CPNE1-209ENST00000415920 TNNQ9UQP3 1299 aa17.25■□□□□ 0.35
CPNE1-209ENST00000415920 TRIM27P14373 513 aa17.24■□□□□ 0.35
CPNE1-209ENST00000415920 ATF7IPQ6VMQ6 1270 aa17.24■□□□□ 0.35
CPNE1-209ENST00000415920 GIGYF2Q6Y7W6 1299 aaKnown RBP17.24■□□□□ 0.35
CPNE1-209ENST00000415920 PNMA8AQ86V59 439 aaPredicted RBP17.24■□□□□ 0.35
CPNE1-209ENST00000415920 LARGE2Q8N3Y3 721 aa17.24■□□□□ 0.35
CPNE1-209ENST00000415920 DNAAF4Q8WXU2 420 aa17.24■□□□□ 0.35
CPNE1-209ENST00000415920 CLUAP1Q96AJ1 413 aa17.24■□□□□ 0.35
CPNE1-209ENST00000415920 MYD88Q99836 296 aa17.24■□□□□ 0.35
CPNE1-209ENST00000415920 ABCC4O15439 1325 aa17.23■□□□□ 0.35
CPNE1-209ENST00000415920 TAF1P21675 1872 aa17.23■□□□□ 0.35
CPNE1-209ENST00000415920 RASSF10A6NK89 507 aa17.23■□□□□ 0.35
CPNE1-209ENST00000415920 EIF6P56537 245 aaKnown RBP17.23■□□□□ 0.35
CPNE1-209ENST00000415920 CC2D2BQ6DHV5 1058 aa17.23■□□□□ 0.35
CPNE1-209ENST00000415920 CRAMP1Q96RY5 1269 aa17.23■□□□□ 0.35
CPNE1-209ENST00000415920 WBP1LQ9NX94 342 aa17.23■□□□□ 0.35
CPNE1-209ENST00000415920 SUPT16HQ9Y5B9 1047 aaKnown RBP17.23■□□□□ 0.35
CPNE1-209ENST00000415920 TRAF5O00463 557 aa17.22■□□□□ 0.35
CPNE1-209ENST00000415920 LBX1P52954 281 aa17.22■□□□□ 0.35
CPNE1-209ENST00000415920 NEXNQ0ZGT2 675 aa17.22■□□□□ 0.35
CPNE1-209ENST00000415920 RBM17Q96I25 401 aaKnown RBP17.22■□□□□ 0.35
CPNE1-209ENST00000415920 AOC3Q16853 763 aa17.21■□□□□ 0.35
CPNE1-209ENST00000415920 DEFB115Q30KQ5 88 aa17.21■□□□□ 0.35
CPNE1-209ENST00000415920 HSP90AB3PQ58FF7 597 aa17.21■□□□□ 0.35
CPNE1-209ENST00000415920 ARHGAP45Q92619 1136 aa17.21■□□□□ 0.35
CPNE1-209ENST00000415920 PRDM10Q9NQV6 1147 aa17.21■□□□□ 0.35
CPNE1-209ENST00000415920 ABT1Q9ULW3 272 aaKnown RBP17.21■□□□□ 0.35
CPNE1-209ENST00000415920 SPEF2Q9C093 1822 aa17.21■□□□□ 0.35
CPNE1-209ENST00000415920 THSD7BQ9C0I4 1608 aa17.21■□□□□ 0.35
CPNE1-209ENST00000415920 WDR33Q9C0J8 1336 aaKnown RBP17.21■□□□□ 0.34
CPNE1-209ENST00000415920 ATP5J2-PTCD1G3V325 749 aa17.2■□□□□ 0.34
CPNE1-209ENST00000415920 PPIP5K2O43314 1243 aa17.2■□□□□ 0.34
CPNE1-209ENST00000415920 CTCFP49711 727 aaPredicted RBP17.2■□□□□ 0.34
CPNE1-209ENST00000415920 AIDAQ96BJ3 306 aa17.2■□□□□ 0.34
CPNE1-209ENST00000415920 METTL22Q9BUU2 404 aaPredicted RBP17.2■□□□□ 0.34
CPNE1-209ENST00000415920 TRPM7Q96QT4 1865 aa17.2■□□□□ 0.34
CPNE1-209ENST00000415920 HSPA8P11142 646 aaKnown RBP17.19■□□□□ 0.34
CPNE1-209ENST00000415920 LMOD1P29536 600 aaPredicted RBP17.19■□□□□ 0.34
CPNE1-209ENST00000415920 CWF19L2Q2TBE0 894 aaKnown RBP17.19■□□□□ 0.34
CPNE1-209ENST00000415920 PPP1R42Q7Z4L9 355 aa17.19■□□□□ 0.34
CPNE1-209ENST00000415920 NIM1KQ8IY84 436 aa17.19■□□□□ 0.34
CPNE1-209ENST00000415920 DZIP1LQ8IYY4 767 aaKnown RBP17.19■□□□□ 0.34
CPNE1-209ENST00000415920 UTP14AQ9BVJ6 771 aaKnown RBP17.19■□□□□ 0.34
CPNE1-209ENST00000415920 ATP6V0A2Q9Y487 856 aa17.19■□□□□ 0.34
CPNE1-209ENST00000415920 COL4A1P02462 1669 aa17.19■□□□□ 0.34
CPNE1-209ENST00000415920 RLBP1P12271 317 aa17.18■□□□□ 0.34
CPNE1-209ENST00000415920 HCLS1P14317 486 aaPredicted RBP17.18■□□□□ 0.34
CPNE1-209ENST00000415920 TCIRG1Q13488 830 aa17.18■□□□□ 0.34
CPNE1-209ENST00000415920 PARP10Q53GL7 1025 aa17.18■□□□□ 0.34
CPNE1-209ENST00000415920 SLC10A5Q5PT55 438 aa17.18■□□□□ 0.34
CPNE1-209ENST00000415920 CST9Q5W186 159 aa17.18■□□□□ 0.34
CPNE1-209ENST00000415920 ITPRIPQ8IWB1 547 aa17.18■□□□□ 0.34
CPNE1-209ENST00000415920 PANK1Q8TE04 598 aa17.18■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 62.4 ms