RNA–Protein interactions for RNA: ENST00000415772.5

SBDSP1-201, Transcript of SBDS, ribosome maturation factor pseudogene 1, humanhuman

TSL 2

Gene SBDSP1, Length 733 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SBDSP1-201ENST00000415772 GMPSP49915 693 aaPredicted RBP20.3■□□□□ 0.84
SBDSP1-201ENST00000415772 TCIRG1Q13488 830 aa20.3■□□□□ 0.84
SBDSP1-201ENST00000415772 GRAPQ13588 217 aa20.3■□□□□ 0.84
SBDSP1-201ENST00000415772 TMC4Q7Z404 712 aa20.3■□□□□ 0.84
SBDSP1-201ENST00000415772 CCDC146Q8IYE0 955 aa20.3■□□□□ 0.84
SBDSP1-201ENST00000415772 GRAPLQ8TC17 118 aaPredicted RBP20.3■□□□□ 0.84
SBDSP1-201ENST00000415772 GPR101Q96P66 508 aaPredicted RBP20.3■□□□□ 0.84
SBDSP1-201ENST00000415772 TRAF5O00463 557 aa20.29■□□□□ 0.84
SBDSP1-201ENST00000415772 HSPA8P11142 646 aaKnown RBP20.29■□□□□ 0.84
SBDSP1-201ENST00000415772 FMR1Q06787 632 aaKnown RBP eCLIP20.29■□□□□ 0.84
SBDSP1-201ENST00000415772 CYP4F22Q6NT55 531 aa20.29■□□□□ 0.84
SBDSP1-201ENST00000415772 LRP10Q7Z4F1 713 aa20.29■□□□□ 0.84
SBDSP1-201ENST00000415772 RTFDC1Q9BY42 306 aaPredicted RBP20.29■□□□□ 0.84
SBDSP1-201ENST00000415772 RAD17O75943 681 aa20.28■□□□□ 0.84
SBDSP1-201ENST00000415772 KIAA2012Q0VF49 1180 aa20.28■□□□□ 0.84
SBDSP1-201ENST00000415772 HDGFL1Q5TGJ6 251 aa20.28■□□□□ 0.84
SBDSP1-201ENST00000415772 ZNF408Q9H9D4 720 aa20.28■□□□□ 0.84
SBDSP1-201ENST00000415772 CDHR2Q9BYE9 1310 aa20.27■□□□□ 0.84
SBDSP1-201ENST00000415772 H7C1D1 291 aa20.27■□□□□ 0.84
SBDSP1-201ENST00000415772 CELF2O95319 508 aaKnown RBP20.27■□□□□ 0.84
SBDSP1-201ENST00000415772 ZNF428Q96B54 188 aa20.27■□□□□ 0.84
SBDSP1-201ENST00000415772 CHPF2Q9P2E5 772 aa20.27■□□□□ 0.84
SBDSP1-201ENST00000415772 TLL2Q9Y6L7 1015 aa20.27■□□□□ 0.84
SBDSP1-201ENST00000415772 MYBBP1AQ9BQG0 1328 aaKnown RBP20.27■□□□□ 0.83
SBDSP1-201ENST00000415772 LAMB2P55268 1798 aa20.26■□□□□ 0.83
SBDSP1-201ENST00000415772 TRPM7Q96QT4 1865 aa20.25■□□□□ 0.83
SBDSP1-201ENST00000415772 CST9Q5W186 159 aa20.25■□□□□ 0.83
SBDSP1-201ENST00000415772 ANKRD13DQ6ZTN6 518 aa20.25■□□□□ 0.83
SBDSP1-201ENST00000415772 PLBD2Q8NHP8 589 aa20.25■□□□□ 0.83
SBDSP1-201ENST00000415772 RUNDC1Q96C34 613 aa20.25■□□□□ 0.83
SBDSP1-201ENST00000415772 DBF4Q9UBU7 674 aaPredicted RBP20.25■□□□□ 0.83
SBDSP1-201ENST00000415772 KRT24Q2M2I5 525 aa20.24■□□□□ 0.83
SBDSP1-201ENST00000415772 WASHC4Q2M389 1173 aa20.24■□□□□ 0.83
SBDSP1-201ENST00000415772 GLIS2Q9BZE0 524 aaPredicted RBP20.24■□□□□ 0.83
SBDSP1-201ENST00000415772 CNOT7Q9UIV1 285 aaKnown RBP20.24■□□□□ 0.83
SBDSP1-201ENST00000415772 NSFL1CQ9UNZ2 370 aaKnown RBP20.24■□□□□ 0.83
SBDSP1-201ENST00000415772 G3V3G9 751 aa20.23■□□□□ 0.83
SBDSP1-201ENST00000415772 C6orf229H3BNL8 230 aa20.23■□□□□ 0.83
SBDSP1-201ENST00000415772 CHL1O00533 1208 aa20.23■□□□□ 0.83
SBDSP1-201ENST00000415772 MAP2K2P36507 400 aa20.23■□□□□ 0.83
SBDSP1-201ENST00000415772 DCAF8Q5TAQ9 597 aa20.23■□□□□ 0.83
SBDSP1-201ENST00000415772 CDC37L1Q7L3B6 337 aa20.23■□□□□ 0.83
SBDSP1-201ENST00000415772 ZC3H15Q8WU90 426 aaKnown RBP20.23■□□□□ 0.83
SBDSP1-201ENST00000415772 ATP5J2-PTCD1G3V325 749 aa20.22■□□□□ 0.83
SBDSP1-201ENST00000415772 RIMBP2O15034 1052 aa20.22■□□□□ 0.83
SBDSP1-201ENST00000415772 HOXB7P09629 217 aa20.22■□□□□ 0.83
SBDSP1-201ENST00000415772 DDX10Q13206 875 aaKnown RBP20.22■□□□□ 0.83
SBDSP1-201ENST00000415772 RTL5Q5HYW3 569 aaPredicted RBP20.22■□□□□ 0.83
SBDSP1-201ENST00000415772 FAM89AQ96GI7 184 aa20.22■□□□□ 0.83
SBDSP1-201ENST00000415772 ABHD8Q96I13 439 aa20.22■□□□□ 0.83
SBDSP1-201ENST00000415772 EYA3Q99504 573 aa20.22■□□□□ 0.83
SBDSP1-201ENST00000415772 HYPKQ9NX55 129 aa20.22■□□□□ 0.83
SBDSP1-201ENST00000415772 AOC2O75106 756 aa20.21■□□□□ 0.83
SBDSP1-201ENST00000415772 HSP90B1P14625 803 aaKnown RBP20.21■□□□□ 0.83
SBDSP1-201ENST00000415772 SAPCD2Q86UD0 394 aa20.21■□□□□ 0.83
SBDSP1-201ENST00000415772 MICALL2Q8IY33 904 aa20.21■□□□□ 0.83
SBDSP1-201ENST00000415772 THSD7BQ9C0I4 1608 aa20.2■□□□□ 0.82
SBDSP1-201ENST00000415772 CA12O43570 354 aa20.2■□□□□ 0.82
SBDSP1-201ENST00000415772 RIC3Q7Z5B4 369 aa20.2■□□□□ 0.82
SBDSP1-201ENST00000415772 GOLGA2Q08379 1002 aa20.19■□□□□ 0.82
SBDSP1-201ENST00000415772 TRPM4Q8TD43 1214 aa20.19■□□□□ 0.82
SBDSP1-201ENST00000415772 DBNDD1Q9H9R9 158 aa20.19■□□□□ 0.82
SBDSP1-201ENST00000415772 TSKSQ9UJT2 592 aa20.19■□□□□ 0.82
SBDSP1-201ENST00000415772 CELF1Q92879 486 aaKnown RBP20.18■□□□□ 0.82
SBDSP1-201ENST00000415772 HHIPL1Q96JK4 782 aa20.18■□□□□ 0.82
SBDSP1-201ENST00000415772 PGAP2Q9UHJ9 254 aa20.18■□□□□ 0.82
SBDSP1-201ENST00000415772 TRIM35Q9UPQ4 493 aa20.18■□□□□ 0.82
SBDSP1-201ENST00000415772 ZBTB12Q9Y330 459 aaPredicted RBP20.18■□□□□ 0.82
SBDSP1-201ENST00000415772 CCDC85CA6NKD9 419 aa20.17■□□□□ 0.82
SBDSP1-201ENST00000415772 YDJCA8MPS7 323 aa20.17■□□□□ 0.82
SBDSP1-201ENST00000415772 IRS4O14654 1257 aaPredicted RBP20.17■□□□□ 0.82
SBDSP1-201ENST00000415772 SF3B3Q15393 1217 aaKnown RBP20.17■□□□□ 0.82
SBDSP1-201ENST00000415772 DUSP27Q5VZP5 1158 aa20.17■□□□□ 0.82
SBDSP1-201ENST00000415772 USP48Q86UV5 1035 aa20.17■□□□□ 0.82
SBDSP1-201ENST00000415772 DPF2Q92785 391 aa20.17■□□□□ 0.82
SBDSP1-201ENST00000415772 DCPSQ96C86 337 aaKnown RBP20.17■□□□□ 0.82
SBDSP1-201ENST00000415772 CFAP44Q96MT7 982 aa20.17■□□□□ 0.82
SBDSP1-201ENST00000415772 ISCA1Q9BUE6 129 aa20.17■□□□□ 0.82
SBDSP1-201ENST00000415772 DDX60Q8IY21 1712 aaKnown RBP20.16■□□□□ 0.82
SBDSP1-201ENST00000415772 PSMD14O00487 310 aa20.16■□□□□ 0.82
SBDSP1-201ENST00000415772 ECE2O60344 883 aa20.16■□□□□ 0.82
SBDSP1-201ENST00000415772 HIRAP54198 1017 aaPredicted RBP20.16■□□□□ 0.82
SBDSP1-201ENST00000415772 HUNKP57058 714 aa20.16■□□□□ 0.82
SBDSP1-201ENST00000415772 CALD1Q05682 793 aaKnown RBP20.16■□□□□ 0.82
SBDSP1-201ENST00000415772 TBC1D10BQ4KMP7 808 aaPredicted RBP20.16■□□□□ 0.82
SBDSP1-201ENST00000415772 RBM26Q5T8P6 1007 aaKnown RBP20.16■□□□□ 0.82
SBDSP1-201ENST00000415772 ZC3H12CQ9C0D7 883 aaKnown RBP20.16■□□□□ 0.82
SBDSP1-201ENST00000415772 LRRC37AA6NMS7 1700 aa20.16■□□□□ 0.82
SBDSP1-201ENST00000415772 RPS12P25398 132 aaKnown RBP20.15■□□□□ 0.82
SBDSP1-201ENST00000415772 BRPF1P55201 1214 aaPredicted RBP20.15■□□□□ 0.82
SBDSP1-201ENST00000415772 RPS8P62241 208 aaKnown RBP20.15■□□□□ 0.82
SBDSP1-201ENST00000415772 GPSM2P81274 684 aa20.15■□□□□ 0.82
SBDSP1-201ENST00000415772 DOK7Q18PE1 504 aa20.15■□□□□ 0.82
SBDSP1-201ENST00000415772 SAMD7Q7Z3H4 446 aa20.15■□□□□ 0.82
SBDSP1-201ENST00000415772 KRT26Q7Z3Y9 468 aa20.15■□□□□ 0.82
SBDSP1-201ENST00000415772 ANKIB1Q9P2G1 1089 aa20.15■□□□□ 0.82
SBDSP1-201ENST00000415772 ADAMTS8Q9UP79 889 aa20.15■□□□□ 0.82
SBDSP1-201ENST00000415772 DUOX1Q9NRD9 1551 aa20.15■□□□□ 0.82
SBDSP1-201ENST00000415772 TAF1P21675 1872 aa20.15■□□□□ 0.82
SBDSP1-201ENST00000415772 SHTN1A0MZ66 631 aa20.14■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms