RNA–Protein interactions for RNA: ENST00000414675.6

LRCH3-202, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene LRCH3, Length 2,299 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-202ENST00000414675 NUTM2AQ8IVF1 878 aaPredicted RBP18.52■□□□□ 0.56
LRCH3-202ENST00000414675 MAP4K1Q92918 833 aa18.52■□□□□ 0.56
LRCH3-202ENST00000414675 DNAJC2Q99543 621 aaKnown RBP18.52■□□□□ 0.56
LRCH3-202ENST00000414675 LARP6Q9BRS8 491 aaKnown RBP18.52■□□□□ 0.56
LRCH3-202ENST00000414675 CASTP20810 708 aaKnown RBP18.52■□□□□ 0.55
LRCH3-202ENST00000414675 INTS4Q96HW7 963 aaKnown RBP18.52■□□□□ 0.55
LRCH3-202ENST00000414675 CCDC85AQ96PX6 553 aaPredicted RBP18.52■□□□□ 0.55
LRCH3-202ENST00000414675 HAUS7Q99871 368 aa18.52■□□□□ 0.55
LRCH3-202ENST00000414675 ZNF609O15014 1411 aa18.51■□□□□ 0.55
LRCH3-202ENST00000414675 NUP98P52948 1817 aa18.51■□□□□ 0.55
LRCH3-202ENST00000414675 COL9A3Q14050 684 aaPredicted RBP18.51■□□□□ 0.55
LRCH3-202ENST00000414675 RUFY3Q7L099 469 aa18.51■□□□□ 0.55
LRCH3-202ENST00000414675 CHAMP1Q96JM3 812 aa18.51■□□□□ 0.55
LRCH3-202ENST00000414675 NEUROD6Q96NK8 337 aa18.51■□□□□ 0.55
LRCH3-202ENST00000414675 ANKRD36CQ5JPF3 1778 aa18.51■□□□□ 0.55
LRCH3-202ENST00000414675 CREB3L3Q68CJ9 461 aa18.51■□□□□ 0.55
LRCH3-202ENST00000414675 JAKMIP1Q96N16 626 aaKnown RBP18.51■□□□□ 0.55
LRCH3-202ENST00000414675 GPR108Q9NPR9 543 aa18.51■□□□□ 0.55
LRCH3-202ENST00000414675 RTN4Q9NQC3 1192 aaKnown RBP18.51■□□□□ 0.55
LRCH3-202ENST00000414675 JCADQ9P266 1359 aa18.5■□□□□ 0.55
LRCH3-202ENST00000414675 CIAO1O76071 339 aa18.5■□□□□ 0.55
LRCH3-202ENST00000414675 DDB1Q16531 1140 aa18.5■□□□□ 0.55
LRCH3-202ENST00000414675 DDX46Q7L014 1031 aaKnown RBP18.5■□□□□ 0.55
LRCH3-202ENST00000414675 NLRP10Q86W26 655 aa18.5■□□□□ 0.55
LRCH3-202ENST00000414675 ZBTB38Q8NAP3 1195 aaPredicted RBP18.5■□□□□ 0.55
LRCH3-202ENST00000414675 FOXD4L5Q5VV16 416 aaPredicted RBP18.49■□□□□ 0.55
LRCH3-202ENST00000414675 MCTP1Q6DN14 999 aa18.49■□□□□ 0.55
LRCH3-202ENST00000414675 MARCH10Q8NA82 808 aaPredicted RBP18.49■□□□□ 0.55
LRCH3-202ENST00000414675 FOXD4L4Q8WXT5 416 aaPredicted RBP18.49■□□□□ 0.55
LRCH3-202ENST00000414675 ACSBG1Q96GR2 724 aa18.49■□□□□ 0.55
LRCH3-202ENST00000414675 PLA2G12BQ9BX93 195 aa18.49■□□□□ 0.55
LRCH3-202ENST00000414675 TAF6LQ9Y6J9 622 aa18.49■□□□□ 0.55
LRCH3-202ENST00000414675 SLC27A2O14975 620 aa18.49■□□□□ 0.55
LRCH3-202ENST00000414675 CDCA7Q9BWT1 371 aaPredicted RBP18.49■□□□□ 0.55
LRCH3-202ENST00000414675 CSF1RP07333 972 aa18.48■□□□□ 0.55
LRCH3-202ENST00000414675 CCDC57Q2TAC2 916 aa18.48■□□□□ 0.55
LRCH3-202ENST00000414675 ZSWIM6Q9HCJ5 1215 aa18.48■□□□□ 0.55
LRCH3-202ENST00000414675 THRAP3Q9Y2W1 955 aaKnown RBP18.48■□□□□ 0.55
LRCH3-202ENST00000414675 SPATA31A5Q5VU36 1347 aa18.48■□□□□ 0.55
LRCH3-202ENST00000414675 SPATA31A7Q8IWB4 1347 aa18.48■□□□□ 0.55
LRCH3-202ENST00000414675 A0A0G2JS52 829 aa18.48■□□□□ 0.55
LRCH3-202ENST00000414675 A0A1B0GUL7 405 aa18.48■□□□□ 0.55
LRCH3-202ENST00000414675 TAF5LO75529 589 aa18.48■□□□□ 0.55
LRCH3-202ENST00000414675 LARGE1O95461 756 aa18.48■□□□□ 0.55
LRCH3-202ENST00000414675 KCNJ4P48050 445 aa18.48■□□□□ 0.55
LRCH3-202ENST00000414675 L1TD1Q5T7N2 865 aaKnown RBP18.48■□□□□ 0.55
LRCH3-202ENST00000414675 CERKQ8TCT0 537 aa18.48■□□□□ 0.55
LRCH3-202ENST00000414675 SEC62Q99442 399 aaKnown RBP18.48■□□□□ 0.55
LRCH3-202ENST00000414675 TM6SF1Q9BZW5 370 aa18.48■□□□□ 0.55
LRCH3-202ENST00000414675 TBC1D2BQ9UPU7 963 aa18.48■□□□□ 0.55
LRCH3-202ENST00000414675 FSD2A1L4K1 749 aa18.47■□□□□ 0.55
LRCH3-202ENST00000414675 CCDC129Q6ZRS4 1044 aa18.47■□□□□ 0.55
LRCH3-202ENST00000414675 RFX7Q2KHR2 1363 aa18.47■□□□□ 0.55
LRCH3-202ENST00000414675 BRD1O95696 1058 aa18.47■□□□□ 0.55
LRCH3-202ENST00000414675 SLFNL1Q499Z3 407 aa18.47■□□□□ 0.55
LRCH3-202ENST00000414675 LIMCH1Q9UPQ0 1083 aa18.47■□□□□ 0.55
LRCH3-202ENST00000414675 RPAP1Q9BWH6 1393 aaPredicted RBP18.46■□□□□ 0.55
LRCH3-202ENST00000414675 GOLGA6L22H0YM25 854 aa18.46■□□□□ 0.55
LRCH3-202ENST00000414675 PTMSP20962 102 aa18.46■□□□□ 0.55
LRCH3-202ENST00000414675 SKOR2Q2VWA4 1001 aaPredicted RBP18.46■□□□□ 0.55
LRCH3-202ENST00000414675 KBTBD3Q8NAB2 608 aa18.46■□□□□ 0.55
LRCH3-202ENST00000414675 PDRG1Q9NUG6 133 aa18.46■□□□□ 0.55
LRCH3-202ENST00000414675 CDHR2Q9BYE9 1310 aa18.46■□□□□ 0.55
LRCH3-202ENST00000414675 MYH3P11055 1940 aa18.46■□□□□ 0.55
LRCH3-202ENST00000414675 SLIT2O94813 1529 aa18.46■□□□□ 0.55
LRCH3-202ENST00000414675 GOLIM4O00461 696 aa18.46■□□□□ 0.54
LRCH3-202ENST00000414675 ZKSCAN1P17029 563 aaPredicted RBP18.46■□□□□ 0.54
LRCH3-202ENST00000414675 IL6STP40189 918 aaPredicted RBP18.46■□□□□ 0.54
LRCH3-202ENST00000414675 DZIP3Q86Y13 1208 aaKnown RBP18.46■□□□□ 0.54
LRCH3-202ENST00000414675 LMBRD1Q9NUN5 540 aa18.46■□□□□ 0.54
LRCH3-202ENST00000414675 CYP46A1Q9Y6A2 500 aa18.46■□□□□ 0.54
LRCH3-202ENST00000414675 NWD2Q9ULI1 1742 aa18.45■□□□□ 0.54
LRCH3-202ENST00000414675 HSP90AB3PQ58FF7 597 aa18.45■□□□□ 0.54
LRCH3-202ENST00000414675 VPS53Q5VIR6 699 aa18.45■□□□□ 0.54
LRCH3-202ENST00000414675 PAG1Q9NWQ8 432 aa18.45■□□□□ 0.54
LRCH3-202ENST00000414675 CEP126Q9P2H0 1117 aa18.45■□□□□ 0.54
LRCH3-202ENST00000414675 UBN2Q6ZU65 1347 aa18.45■□□□□ 0.54
LRCH3-202ENST00000414675 ADORA1P30542 326 aa18.44■□□□□ 0.54
LRCH3-202ENST00000414675 INTS5Q6P9B9 1019 aaKnown RBP18.44■□□□□ 0.54
LRCH3-202ENST00000414675 MYH14Q7Z406 1995 aaKnown RBP18.44■□□□□ 0.54
LRCH3-202ENST00000414675 IFIT5Q13325 482 aaKnown RBP18.44■□□□□ 0.54
LRCH3-202ENST00000414675 TTLL11Q8NHH1 800 aa18.44■□□□□ 0.54
LRCH3-202ENST00000414675 GREM2Q9H772 168 aa18.44■□□□□ 0.54
LRCH3-202ENST00000414675 PALLDQ8WX93 1383 aa18.44■□□□□ 0.54
LRCH3-202ENST00000414675 RIC1Q4ADV7 1423 aa18.43■□□□□ 0.54
LRCH3-202ENST00000414675 GOLGA6L3A6NEY3 463 aa18.43■□□□□ 0.54
LRCH3-202ENST00000414675 ERVV-1B6SEH8 477 aa18.43■□□□□ 0.54
LRCH3-202ENST00000414675 DTNBO60941 627 aa18.43■□□□□ 0.54
LRCH3-202ENST00000414675 EIF5P55010 431 aaKnown RBP18.43■□□□□ 0.54
LRCH3-202ENST00000414675 USPL1Q5W0Q7 1092 aa18.43■□□□□ 0.54
LRCH3-202ENST00000414675 IRS4O14654 1257 aaPredicted RBP18.42■□□□□ 0.54
LRCH3-202ENST00000414675 IFIT1P09914 478 aaKnown RBP18.42■□□□□ 0.54
LRCH3-202ENST00000414675 CTSWP56202 376 aa18.42■□□□□ 0.54
LRCH3-202ENST00000414675 ST3GAL1Q11201 340 aa18.42■□□□□ 0.54
LRCH3-202ENST00000414675 ITPK1Q13572 414 aa18.42■□□□□ 0.54
LRCH3-202ENST00000414675 MCMDC2Q4G0Z9 681 aa18.42■□□□□ 0.54
LRCH3-202ENST00000414675 TAF7LQ5H9L4 462 aa18.42■□□□□ 0.54
LRCH3-202ENST00000414675 TRMT112Q9UI30 125 aaKnown RBP18.42■□□□□ 0.54
LRCH3-202ENST00000414675 FBXO3Q9UK99 471 aa18.42■□□□□ 0.54
LRCH3-202ENST00000414675 DDX49Q9Y6V7 483 aaKnown RBP18.42■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms