RNA–Protein interactions for RNA: ENST00000413539.6

DYSF-210, Transcript of dysferlin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene DYSF, Length 6,769 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DYSF-210ENST00000413539 CTAGE8P0CG41 777 aa17.15■□□□□ 0.34
DYSF-210ENST00000413539 CTAGE6Q86UF2 777 aa17.15■□□□□ 0.34
DYSF-210ENST00000413539 CTAGE4Q8IX94 777 aa17.15■□□□□ 0.34
DYSF-210ENST00000413539 ECM2O94769 699 aaPredicted RBP17.14■□□□□ 0.34
DYSF-210ENST00000413539 PPARDQ03181 441 aa17.14■□□□□ 0.33
DYSF-210ENST00000413539 AKNAD1Q5T1N1 836 aa17.14■□□□□ 0.33
DYSF-210ENST00000413539 CCDC171Q6TFL3 1326 aa17.14■□□□□ 0.33
DYSF-210ENST00000413539 DAAM2Q86T65 1068 aa17.14■□□□□ 0.33
DYSF-210ENST00000413539 ARFGAP3Q9NP61 516 aa17.14■□□□□ 0.33
DYSF-210ENST00000413539 CCDC174Q6PII3 467 aa17.14■□□□□ 0.33
DYSF-210ENST00000413539 EMILIN1Q9Y6C2 1016 aa17.14■□□□□ 0.33
DYSF-210ENST00000413539 PHACTR2O75167 634 aa17.14■□□□□ 0.33
DYSF-210ENST00000413539 ZSCAN22P10073 491 aaPredicted RBP17.13■□□□□ 0.33
DYSF-210ENST00000413539 TMX3Q96JJ7 454 aa17.13■□□□□ 0.33
DYSF-210ENST00000413539 ZEB2O60315 1214 aa17.13■□□□□ 0.33
DYSF-210ENST00000413539 TBCAO75347 108 aaKnown RBP17.13■□□□□ 0.33
DYSF-210ENST00000413539 FAM160A1Q05DH4 1040 aa17.13■□□□□ 0.33
DYSF-210ENST00000413539 HEATR3Q7Z4Q2 680 aa17.13■□□□□ 0.33
DYSF-210ENST00000413539 NCOA7Q8NI08 942 aa17.13■□□□□ 0.33
DYSF-210ENST00000413539 SSX2IPQ9Y2D8 614 aa17.13■□□□□ 0.33
DYSF-210ENST00000413539 KLF18A0A0U1RQI7 1052 aa17.13■□□□□ 0.33
DYSF-210ENST00000413539 RHOXF2BP0C7M4 288 aa17.13■□□□□ 0.33
DYSF-210ENST00000413539 DDX46Q7L014 1031 aaKnown RBP17.13■□□□□ 0.33
DYSF-210ENST00000413539 THEMISQ8N1K5 641 aaPredicted RBP17.13■□□□□ 0.33
DYSF-210ENST00000413539 RHOXF2Q9BQY4 288 aa17.13■□□□□ 0.33
DYSF-210ENST00000413539 TTC12Q9H892 705 aaPredicted RBP17.13■□□□□ 0.33
DYSF-210ENST00000413539 IFI16Q16666 785 aaKnown RBP17.13■□□□□ 0.33
DYSF-210ENST00000413539 NSRP1Q9H0G5 558 aaKnown RBP17.13■□□□□ 0.33
DYSF-210ENST00000413539 CASKIN1Q8WXD9 1431 aa17.13■□□□□ 0.33
DYSF-210ENST00000413539 CCDC50Q8IVM0 306 aa17.13■□□□□ 0.33
DYSF-210ENST00000413539 FAM83GA6ND36 823 aa17.12■□□□□ 0.33
DYSF-210ENST00000413539 IFT81Q8WYA0 676 aa17.12■□□□□ 0.33
DYSF-210ENST00000413539 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP17.12■□□□□ 0.33
DYSF-210ENST00000413539 EEF2P13639 858 aaKnown RBP17.12■□□□□ 0.33
DYSF-210ENST00000413539 SYT1P21579 422 aa17.12■□□□□ 0.33
DYSF-210ENST00000413539 KIF5BP33176 963 aa17.12■□□□□ 0.33
DYSF-210ENST00000413539 TTC22Q5TAA0 569 aa17.12■□□□□ 0.33
DYSF-210ENST00000413539 ADAMTS2O95450 1211 aa17.12■□□□□ 0.33
DYSF-210ENST00000413539 CAPN2P17655 700 aa17.12■□□□□ 0.33
DYSF-210ENST00000413539 KANK3Q6NY19 840 aa17.12■□□□□ 0.33
DYSF-210ENST00000413539 ZBTB16Q05516 673 aa17.12■□□□□ 0.33
DYSF-210ENST00000413539 TTF1Q15361 905 aaPredicted RBP17.12■□□□□ 0.33
DYSF-210ENST00000413539 FAM212AQ96EL1 285 aa17.12■□□□□ 0.33
DYSF-210ENST00000413539 PRIMPOLQ96LW4 560 aa17.12■□□□□ 0.33
DYSF-210ENST00000413539 SELENOOQ9BVL4 669 aa17.12■□□□□ 0.33
DYSF-210ENST00000413539 ANXA1P04083 346 aa17.12■□□□□ 0.33
DYSF-210ENST00000413539 ERICH3Q5RHP9 1530 aa17.12■□□□□ 0.33
DYSF-210ENST00000413539 ALG1Q9BT22 464 aa17.11■□□□□ 0.33
DYSF-210ENST00000413539 UVSSAQ2YD98 709 aa17.11■□□□□ 0.33
DYSF-210ENST00000413539 CFAP58Q5T655 872 aa17.11■□□□□ 0.33
DYSF-210ENST00000413539 CCDC25Q86WR0 208 aa17.11■□□□□ 0.33
DYSF-210ENST00000413539 RAB3IL1Q8TBN0 382 aa17.11■□□□□ 0.33
DYSF-210ENST00000413539 STXBP4Q6ZWJ1 553 aa17.11■□□□□ 0.33
DYSF-210ENST00000413539 IQSEC3Q9UPP2 1182 aaPredicted RBP17.11■□□□□ 0.33
DYSF-210ENST00000413539 POLA1P09884 1462 aaPredicted RBP17.11■□□□□ 0.33
DYSF-210ENST00000413539 BRF1Q92994 677 aa17.11■□□□□ 0.33
DYSF-210ENST00000413539 NAP1L3Q99457 506 aaPredicted RBP17.11■□□□□ 0.33
DYSF-210ENST00000413539 LZTFL1Q9NQ48 299 aa17.11■□□□□ 0.33
DYSF-210ENST00000413539 ATAD2Q6PL18 1390 aa17.11■□□□□ 0.33
DYSF-210ENST00000413539 CTAGE9A4FU28 777 aa17.11■□□□□ 0.33
DYSF-210ENST00000413539 DHX58Q96C10 678 aa17.11■□□□□ 0.33
DYSF-210ENST00000413539 SPAG5Q96R06 1193 aa17.11■□□□□ 0.33
DYSF-210ENST00000413539 ECHDC1Q9NTX5 307 aa17.11■□□□□ 0.33
DYSF-210ENST00000413539 HFM1A2PYH4 1435 aa17.11■□□□□ 0.33
DYSF-210ENST00000413539 PPP1R42Q7Z4L9 355 aa17.1■□□□□ 0.33
DYSF-210ENST00000413539 FERMT1Q9BQL6 677 aa17.1■□□□□ 0.33
DYSF-210ENST00000413539 CYLC1P35663 651 aaPredicted RBP17.1■□□□□ 0.33
DYSF-210ENST00000413539 PDE4BQ07343 736 aa17.1■□□□□ 0.33
DYSF-210ENST00000413539 FLIIQ13045 1269 aa17.1■□□□□ 0.33
DYSF-210ENST00000413539 CHST3Q7LGC8 479 aa17.1■□□□□ 0.33
DYSF-210ENST00000413539 EHBP1Q8NDI1 1231 aa17.1■□□□□ 0.33
DYSF-210ENST00000413539 LDHAL6AQ6ZMR3 332 aa17.1■□□□□ 0.33
DYSF-210ENST00000413539 RASAL2Q9UJF2 1139 aa17.1■□□□□ 0.33
DYSF-210ENST00000413539 STX8Q9UNK0 236 aa17.1■□□□□ 0.33
DYSF-210ENST00000413539 F8W031 263 aaPredicted RBP17.1■□□□□ 0.33
DYSF-210ENST00000413539 DNM1Q05193 864 aaKnown RBP17.1■□□□□ 0.33
DYSF-210ENST00000413539 CFAP57Q96MR6 1250 aa17.1■□□□□ 0.33
DYSF-210ENST00000413539 ATAD2BQ9ULI0 1458 aa17.1■□□□□ 0.33
DYSF-210ENST00000413539 Q6ZUG5 572 aa17.1■□□□□ 0.33
DYSF-210ENST00000413539 CCDC121Q6ZUS5 278 aa17.1■□□□□ 0.33
DYSF-210ENST00000413539 RPGRIP1LQ68CZ1 1315 aa17.1■□□□□ 0.33
DYSF-210ENST00000413539 SBNO2Q9Y2G9 1366 aa17.1■□□□□ 0.33
DYSF-210ENST00000413539 STX17P56962 302 aa17.1■□□□□ 0.33
DYSF-210ENST00000413539 KCNK9Q9NPC2 374 aa17.1■□□□□ 0.33
DYSF-210ENST00000413539 CCDC129Q6ZRS4 1044 aa17.09■□□□□ 0.33
DYSF-210ENST00000413539 MCM5P33992 734 aa17.09■□□□□ 0.33
DYSF-210ENST00000413539 PLS1Q14651 629 aa17.09■□□□□ 0.33
DYSF-210ENST00000413539 WTAPQ15007 396 aa17.09■□□□□ 0.33
DYSF-210ENST00000413539 IFIT1BQ5T764 474 aaKnown RBP17.09■□□□□ 0.33
DYSF-210ENST00000413539 PLIN2Q99541 437 aa17.09■□□□□ 0.33
DYSF-210ENST00000413539 GUCA1BQ9UMX6 200 aa17.09■□□□□ 0.33
DYSF-210ENST00000413539 KLHL40Q2TBA0 621 aa17.09■□□□□ 0.33
DYSF-210ENST00000413539 SREK1Q8WXA9 508 aaKnown RBP17.09■□□□□ 0.33
DYSF-210ENST00000413539 RMND1Q9NWS8 449 aa17.09■□□□□ 0.33
DYSF-210ENST00000413539 LMOD1P29536 600 aaPredicted RBP17.09■□□□□ 0.33
DYSF-210ENST00000413539 TMCO4Q5TGY1 634 aa17.09■□□□□ 0.33
DYSF-210ENST00000413539 TTC21AQ8NDW8 1320 aa17.09■□□□□ 0.33
DYSF-210ENST00000413539 TSPY3P0CV98 308 aa17.08■□□□□ 0.33
DYSF-210ENST00000413539 TSPY8P0CW00 308 aa17.08■□□□□ 0.33
DYSF-210ENST00000413539 UBE3BQ7Z3V4 1068 aa17.08■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms