RNA–Protein interactions for RNA: ENST00000413197.5

COPS7B-210, Transcript of COP9 signalosome subunit 7B, humanhuman

TSL 2

Gene COPS7B, Length 2,442 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7B-210ENST00000413197 FAM193AP78312 1265 aa16.42■□□□□ 0.22
COPS7B-210ENST00000413197 SPC24Q8NBT2 197 aa16.42■□□□□ 0.22
COPS7B-210ENST00000413197 PDRG1Q9NUG6 133 aa16.42■□□□□ 0.22
COPS7B-210ENST00000413197 ELP1O95163 1332 aa16.42■□□□□ 0.22
COPS7B-210ENST00000413197 GNAT3A8MTJ3 354 aa16.41■□□□□ 0.22
COPS7B-210ENST00000413197 FAM177A1Q8N128 213 aaPredicted RBP16.41■□□□□ 0.22
COPS7B-210ENST00000413197 CCDC171Q6TFL3 1326 aa16.41■□□□□ 0.22
COPS7B-210ENST00000413197 LRP6O75581 1613 aa16.41■□□□□ 0.22
COPS7B-210ENST00000413197 ADCK5Q3MIX3 580 aa16.41■□□□□ 0.22
COPS7B-210ENST00000413197 MRVI1Q9Y6F6 885 aa16.41■□□□□ 0.22
COPS7B-210ENST00000413197 SRGAP3O43295 1099 aa16.4■□□□□ 0.22
COPS7B-210ENST00000413197 GLRX3O76003 335 aaKnown RBP16.4■□□□□ 0.22
COPS7B-210ENST00000413197 TTC6Q86TZ1 520 aa16.4■□□□□ 0.22
COPS7B-210ENST00000413197 KIF20AO95235 890 aa16.4■□□□□ 0.22
COPS7B-210ENST00000413197 PTH1RQ03431 593 aa16.4■□□□□ 0.22
COPS7B-210ENST00000413197 MAP3K11Q16584 847 aa16.4■□□□□ 0.22
COPS7B-210ENST00000413197 ME3Q16798 604 aa16.4■□□□□ 0.22
COPS7B-210ENST00000413197 RUFY2Q8WXA3 655 aa16.4■□□□□ 0.22
COPS7B-210ENST00000413197 JAKMIP1Q96N16 626 aaKnown RBP16.4■□□□□ 0.22
COPS7B-210ENST00000413197 CYP46A1Q9Y6A2 500 aa16.4■□□□□ 0.22
COPS7B-210ENST00000413197 PTGS1P23219 599 aa16.39■□□□□ 0.21
COPS7B-210ENST00000413197 SYCP1Q15431 976 aa16.39■□□□□ 0.21
COPS7B-210ENST00000413197 HSP90AB4PQ58FF6 505 aa16.39■□□□□ 0.21
COPS7B-210ENST00000413197 IL17REQ8NFR9 667 aa16.39■□□□□ 0.21
COPS7B-210ENST00000413197 PHAXQ9H814 394 aaKnown RBP16.39■□□□□ 0.21
COPS7B-210ENST00000413197 KRT85P78386 507 aa16.39■□□□□ 0.21
COPS7B-210ENST00000413197 TYRO3Q06418 890 aa16.39■□□□□ 0.21
COPS7B-210ENST00000413197 NECTIN1Q15223 517 aa16.39■□□□□ 0.21
COPS7B-210ENST00000413197 NUP62CLQ9H1M0 184 aa16.39■□□□□ 0.21
COPS7B-210ENST00000413197 MEGF6O75095 1541 aa16.39■□□□□ 0.21
COPS7B-210ENST00000413197 VPS37CA5D8V6 355 aaPredicted RBP16.38■□□□□ 0.21
COPS7B-210ENST00000413197 TAF7Q15545 349 aaPredicted RBP16.38■□□□□ 0.21
COPS7B-210ENST00000413197 PRPF40BQ6NWY9 871 aaKnown RBP16.38■□□□□ 0.21
COPS7B-210ENST00000413197 TOM1L2Q6ZVM7 507 aa16.38■□□□□ 0.21
COPS7B-210ENST00000413197 WDR17Q8IZU2 1322 aa16.38■□□□□ 0.21
COPS7B-210ENST00000413197 JCADQ9P266 1359 aa16.38■□□□□ 0.21
COPS7B-210ENST00000413197 NBPF7P0C2Y1 421 aaPredicted RBP16.38■□□□□ 0.21
COPS7B-210ENST00000413197 LIG1P18858 919 aa16.38■□□□□ 0.21
COPS7B-210ENST00000413197 RBM43Q6ZSC3 357 aaKnown RBP16.38■□□□□ 0.21
COPS7B-210ENST00000413197 FEZ1Q99689 392 aa16.38■□□□□ 0.21
COPS7B-210ENST00000413197 NCAPD2Q15021 1401 aa16.38■□□□□ 0.21
COPS7B-210ENST00000413197 HDGFL1Q5TGJ6 251 aa16.37■□□□□ 0.21
COPS7B-210ENST00000413197 DNAJC2Q99543 621 aaKnown RBP16.37■□□□□ 0.21
COPS7B-210ENST00000413197 U2AF2P26368 475 aaKnown RBP eCLIP16.37■□□□□ 0.211e-6■■■□□ 16.3
COPS7B-210ENST00000413197 LUZP1Q86V48 1076 aa16.37■□□□□ 0.21
COPS7B-210ENST00000413197 C8orf37Q96NL8 207 aa16.37■□□□□ 0.21
COPS7B-210ENST00000413197 NCBP1Q09161 790 aaKnown RBP16.36■□□□□ 0.21
COPS7B-210ENST00000413197 BEND3Q5T5X7 828 aa16.36■□□□□ 0.21
COPS7B-210ENST00000413197 LARP1BQ659C4 914 aaKnown RBP16.36■□□□□ 0.21
COPS7B-210ENST00000413197 ARHGAP30Q7Z6I6 1101 aaPredicted RBP16.36■□□□□ 0.21
COPS7B-210ENST00000413197 PLA2G4DQ86XP0 818 aa16.36■□□□□ 0.21
COPS7B-210ENST00000413197 TPCN1Q9ULQ1 816 aa16.36■□□□□ 0.21
COPS7B-210ENST00000413197 SPDYE4A6NLX3 237 aa16.36■□□□□ 0.21
COPS7B-210ENST00000413197 DTNBO60941 627 aa16.36■□□□□ 0.21
COPS7B-210ENST00000413197 EVA1CP58658 441 aa16.36■□□□□ 0.21
COPS7B-210ENST00000413197 CDC37L1Q7L3B6 337 aa16.36■□□□□ 0.21
COPS7B-210ENST00000413197 CCDC186Q7Z3E2 898 aa16.36■□□□□ 0.21
COPS7B-210ENST00000413197 CBX8Q9HC52 389 aa16.36■□□□□ 0.21
COPS7B-210ENST00000413197 SMTNL1A8MU46 457 aa16.35■□□□□ 0.21
COPS7B-210ENST00000413197 MTX1Q13505 466 aa16.35■□□□□ 0.21
COPS7B-210ENST00000413197 NECAB1Q8N987 351 aa16.35■□□□□ 0.21
COPS7B-210ENST00000413197 MAFGO15525 162 aa16.35■□□□□ 0.21
COPS7B-210ENST00000413197 PDCP20941 246 aa16.35■□□□□ 0.21
COPS7B-210ENST00000413197 TDRD7Q8NHU6 1098 aaKnown RBP16.35■□□□□ 0.21
COPS7B-210ENST00000413197 DDX19AQ9NUU7 478 aaKnown RBP16.35■□□□□ 0.21
COPS7B-210ENST00000413197 ZKSCAN1P17029 563 aaPredicted RBP16.34■□□□□ 0.21
COPS7B-210ENST00000413197 ZNF75DP51815 510 aa16.34■□□□□ 0.21
COPS7B-210ENST00000413197 CAMK4Q16566 473 aa16.34■□□□□ 0.21
COPS7B-210ENST00000413197 ANO6Q4KMQ2 910 aa16.34■□□□□ 0.21
COPS7B-210ENST00000413197 SCAND2PQ9GZW5 306 aaPredicted RBP16.34■□□□□ 0.21
COPS7B-210ENST00000413197 TNMDQ9H2S6 317 aa16.34■□□□□ 0.21
COPS7B-210ENST00000413197 ECHDC1Q9NTX5 307 aa16.34■□□□□ 0.21
COPS7B-210ENST00000413197 PLCH1Q4KWH8 1693 aa16.34■□□□□ 0.21
COPS7B-210ENST00000413197 LRMPQ12912 555 aa16.34■□□□□ 0.21
COPS7B-210ENST00000413197 SNRKQ9NRH2 765 aa16.34■□□□□ 0.21
COPS7B-210ENST00000413197 DACT1Q9NYF0 836 aa16.34■□□□□ 0.21
COPS7B-210ENST00000413197 COL14A1Q05707 1796 aaKnown RBP16.33■□□□□ 0.21
COPS7B-210ENST00000413197 CREB3L3Q68CJ9 461 aa16.33■□□□□ 0.2
COPS7B-210ENST00000413197 ZSCAN25Q6NSZ9 544 aa16.33■□□□□ 0.2
COPS7B-210ENST00000413197 CLASRPQ8N2M8 674 aaKnown RBP16.33■□□□□ 0.2
COPS7B-210ENST00000413197 GPATCH11Q8N954 259 aa16.33■□□□□ 0.2
COPS7B-210ENST00000413197 DNAAF4Q8WXU2 420 aa16.33■□□□□ 0.2
COPS7B-210ENST00000413197 MAP4K1Q92918 833 aa16.33■□□□□ 0.2
COPS7B-210ENST00000413197 OGFRQ9NZT2 677 aa16.33■□□□□ 0.2
COPS7B-210ENST00000413197 RBM8AQ9Y5S9 174 aaKnown RBP16.33■□□□□ 0.2
COPS7B-210ENST00000413197 ABCC6O95255 1503 aa16.33■□□□□ 0.2
COPS7B-210ENST00000413197 EVI5LQ96CN4 794 aa16.33■□□□□ 0.2
COPS7B-210ENST00000413197 ALDH8A1Q9H2A2 487 aaPredicted RBP16.33■□□□□ 0.2
COPS7B-210ENST00000413197 CLSTN2Q9H4D0 955 aa16.33■□□□□ 0.2
COPS7B-210ENST00000413197 PATL2C9JE40 543 aaKnown RBP16.32■□□□□ 0.2
COPS7B-210ENST00000413197 OS9Q13438 667 aaPredicted RBP16.32■□□□□ 0.2
COPS7B-210ENST00000413197 FAM173BQ6P4H8 233 aa16.32■□□□□ 0.2
COPS7B-210ENST00000413197 FERMT3Q86UX7 667 aa16.32■□□□□ 0.2
COPS7B-210ENST00000413197 CKAP2LQ8IYA6 745 aa16.32■□□□□ 0.2
COPS7B-210ENST00000413197 LGR6Q9HBX8 967 aa16.32■□□□□ 0.2
COPS7B-210ENST00000413197 NRBP1Q9UHY1 535 aa16.32■□□□□ 0.2
COPS7B-210ENST00000413197 CTNNA3Q9UI47 895 aa16.32■□□□□ 0.2
COPS7B-210ENST00000413197 PAXBP1Q9Y5B6 917 aa16.32■□□□□ 0.2
COPS7B-210ENST00000413197 HOXB7P09629 217 aa16.31■□□□□ 0.2
COPS7B-210ENST00000413197 PSMA5P28066 241 aa16.31■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 116.8 ms