RNA–Protein interactions for RNA: ENST00000412686.5

CPSF4-202, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 5

Gene CPSF4, Length 745 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-202ENST00000412686 RPGRQ92834 1020 aaKnown RBP9.81□□□□□ -0.84
CPSF4-202ENST00000412686 CNKSR1Q969H4 720 aa9.81□□□□□ -0.84
CPSF4-202ENST00000412686 PDZRN3Q9UPQ7 1066 aa9.81□□□□□ -0.84
CPSF4-202ENST00000412686 CHD4Q14839 1912 aa9.81□□□□□ -0.84
CPSF4-202ENST00000412686 ABCC4O15439 1325 aa9.81□□□□□ -0.84
CPSF4-202ENST00000412686 PTPRCP08575 1304 aa9.81□□□□□ -0.84
CPSF4-202ENST00000412686 MYH3P11055 1940 aa9.8□□□□□ -0.84
CPSF4-202ENST00000412686 H7C1W4 665 aa9.8□□□□□ -0.84
CPSF4-202ENST00000412686 GRIN3BO60391 1043 aa9.8□□□□□ -0.84
CPSF4-202ENST00000412686 PRELPP51888 382 aa9.8□□□□□ -0.84
CPSF4-202ENST00000412686 FER1L6Q2WGJ9 1857 aa9.8□□□□□ -0.84
CPSF4-202ENST00000412686 CDHR2Q9BYE9 1310 aa9.8□□□□□ -0.84
CPSF4-202ENST00000412686 SPEF2Q9C093 1822 aa9.79□□□□□ -0.84
CPSF4-202ENST00000412686 NFKBIEO00221 500 aa9.79□□□□□ -0.84
CPSF4-202ENST00000412686 HOXA10P31260 410 aaPredicted RBP9.79□□□□□ -0.84
CPSF4-202ENST00000412686 C7orf43Q8WVR3 580 aa9.79□□□□□ -0.84
CPSF4-202ENST00000412686 FRAT1Q92837 279 aaPredicted RBP9.79□□□□□ -0.84
CPSF4-202ENST00000412686 CELF1Q92879 486 aaKnown RBP9.79□□□□□ -0.84
CPSF4-202ENST00000412686 RBM17Q96I25 401 aaKnown RBP9.79□□□□□ -0.84
CPSF4-202ENST00000412686 SRCIN1Q9C0H9 1055 aa9.79□□□□□ -0.84
CPSF4-202ENST00000412686 SSUH2Q9Y2M2 353 aa9.79□□□□□ -0.84
CPSF4-202ENST00000412686 SBF1O95248 1867 aa9.79□□□□□ -0.84
CPSF4-202ENST00000412686 CCDC88AQ3V6T2 1871 aa9.79□□□□□ -0.84
CPSF4-202ENST00000412686 PPEF1O14829 653 aaPredicted RBP9.78□□□□□ -0.84
CPSF4-202ENST00000412686 PDE8AO60658 829 aa9.78□□□□□ -0.84
CPSF4-202ENST00000412686 BRPF1P55201 1214 aaPredicted RBP9.78□□□□□ -0.84
CPSF4-202ENST00000412686 SF3B3Q15393 1217 aaKnown RBP9.78□□□□□ -0.84
CPSF4-202ENST00000412686 EPHA10Q5JZY3 1008 aa9.78□□□□□ -0.84
CPSF4-202ENST00000412686 CRAMP1Q96RY5 1269 aa9.78□□□□□ -0.84
CPSF4-202ENST00000412686 SEC31BQ9NQW1 1179 aa9.78□□□□□ -0.84
CPSF4-202ENST00000412686 SNED1Q8TER0 1413 aa9.78□□□□□ -0.84
CPSF4-202ENST00000412686 LRRC37AA6NMS7 1700 aa9.77□□□□□ -0.85
CPSF4-202ENST00000412686 GRM8O00222 908 aa9.77□□□□□ -0.85
CPSF4-202ENST00000412686 ALDH1L1O75891 902 aa9.77□□□□□ -0.85
CPSF4-202ENST00000412686 NBPF7P0C2Y1 421 aaPredicted RBP9.77□□□□□ -0.85
CPSF4-202ENST00000412686 TRIM27P14373 513 aa9.77□□□□□ -0.85
CPSF4-202ENST00000412686 ALDH1B1P30837 517 aa9.77□□□□□ -0.85
CPSF4-202ENST00000412686 CTSWP56202 376 aa9.77□□□□□ -0.85
CPSF4-202ENST00000412686 GRAPQ13588 217 aa9.77□□□□□ -0.85
CPSF4-202ENST00000412686 DDX46Q7L014 1031 aaKnown RBP9.77□□□□□ -0.85
CPSF4-202ENST00000412686 GRAPLQ8TC17 118 aaPredicted RBP9.77□□□□□ -0.85
CPSF4-202ENST00000412686 CLUAP1Q96AJ1 413 aa9.77□□□□□ -0.85
CPSF4-202ENST00000412686 SUCLG2Q96I99 432 aa9.77□□□□□ -0.85
CPSF4-202ENST00000412686 API5Q9BZZ5 524 aaKnown RBP9.77□□□□□ -0.85
CPSF4-202ENST00000412686 GREM2Q9H772 168 aa9.77□□□□□ -0.85
CPSF4-202ENST00000412686 KIF16BQ96L93 1317 aa9.77□□□□□ -0.85
CPSF4-202ENST00000412686 TIAM2Q8IVF5 1701 aa9.76□□□□□ -0.85
CPSF4-202ENST00000412686 SPDYE4A6NLX3 237 aa9.76□□□□□ -0.85
CPSF4-202ENST00000412686 YY1P25490 414 aa9.76□□□□□ -0.85
CPSF4-202ENST00000412686 FOXO4P98177 505 aa9.76□□□□□ -0.85
CPSF4-202ENST00000412686 FAM161AQ3B820 660 aa9.76□□□□□ -0.85
CPSF4-202ENST00000412686 CCDC93Q567U6 631 aa9.76□□□□□ -0.85
CPSF4-202ENST00000412686 ATF7IPQ6VMQ6 1270 aa9.76□□□□□ -0.85
CPSF4-202ENST00000412686 TTLL11Q8NHH1 800 aa9.76□□□□□ -0.85
CPSF4-202ENST00000412686 KAZALD1Q96I82 304 aa9.76□□□□□ -0.85
CPSF4-202ENST00000412686 PLA2G12BQ9BX93 195 aa9.76□□□□□ -0.85
CPSF4-202ENST00000412686 C9orf78Q9NZ63 289 aaPredicted RBP9.76□□□□□ -0.85
CPSF4-202ENST00000412686 DUOX1Q9NRD9 1551 aa9.75□□□□□ -0.85
CPSF4-202ENST00000412686 CCDC152Q4G0S7 254 aa9.75□□□□□ -0.85
CPSF4-202ENST00000412686 C9orf131Q5VYM1 1079 aa9.75□□□□□ -0.85
CPSF4-202ENST00000412686 ZKSCAN2Q63HK3 967 aa9.75□□□□□ -0.85
CPSF4-202ENST00000412686 ARHGAP45Q92619 1136 aa9.75□□□□□ -0.85
CPSF4-202ENST00000412686 USP44Q9H0E7 712 aa9.75□□□□□ -0.85
CPSF4-202ENST00000412686 TAOK3Q9H2K8 898 aa9.75□□□□□ -0.85
CPSF4-202ENST00000412686 ATP6V0A2Q9Y487 856 aa9.75□□□□□ -0.85
CPSF4-202ENST00000412686 LTBP1Q14766 1721 aa9.75□□□□□ -0.85
CPSF4-202ENST00000412686 UTYO14607 1347 aa9.75□□□□□ -0.85
CPSF4-202ENST00000412686 COL4A5P29400 1685 aa9.74□□□□□ -0.85
CPSF4-202ENST00000412686 RLBP1P12271 317 aa9.74□□□□□ -0.85
CPSF4-202ENST00000412686 CCT4P50991 539 aaKnown RBP9.74□□□□□ -0.85
CPSF4-202ENST00000412686 TMEM57Q8N5G2 664 aa9.74□□□□□ -0.85
CPSF4-202ENST00000412686 MEIS3Q99687 375 aa9.74□□□□□ -0.85
CPSF4-202ENST00000412686 ZNF277Q9NRM2 450 aaPredicted RBP9.74□□□□□ -0.85
CPSF4-202ENST00000412686 RNF181Q9P0P0 153 aa9.74□□□□□ -0.85
CPSF4-202ENST00000412686 RCAN3Q9UKA8 241 aa9.74□□□□□ -0.85
CPSF4-202ENST00000412686 CHMP3Q9Y3E7 222 aa9.74□□□□□ -0.85
CPSF4-202ENST00000412686 DICER1Q9UPY3 1922 aaKnown RBP9.74□□□□□ -0.85
CPSF4-202ENST00000412686 A0A1B0GUL6 1792 aa9.73□□□□□ -0.85
CPSF4-202ENST00000412686 IPO8O15397 1037 aaKnown RBP9.73□□□□□ -0.85
CPSF4-202ENST00000412686 PLIN1O60240 522 aa9.73□□□□□ -0.85
CPSF4-202ENST00000412686 BBOX1O75936 387 aa9.73□□□□□ -0.85
CPSF4-202ENST00000412686 CSF1RP07333 972 aa9.73□□□□□ -0.85
CPSF4-202ENST00000412686 HSP90B1P14625 803 aaKnown RBP9.73□□□□□ -0.85
CPSF4-202ENST00000412686 ITGA6P23229 1130 aa9.73□□□□□ -0.85
CPSF4-202ENST00000412686 RPS8P62241 208 aaKnown RBP9.73□□□□□ -0.85
CPSF4-202ENST00000412686 FKBP4Q02790 459 aaKnown RBP eCLIP9.73□□□□□ -0.85
CPSF4-202ENST00000412686 INTS3Q68E01 1043 aaKnown RBP9.73□□□□□ -0.85
CPSF4-202ENST00000412686 LMBR1LQ6UX01 489 aa9.73□□□□□ -0.85
CPSF4-202ENST00000412686 SP8Q8IXZ3 490 aa9.73□□□□□ -0.85
CPSF4-202ENST00000412686 ANKRD44Q8N8A2 993 aa9.73□□□□□ -0.85
CPSF4-202ENST00000412686 GPR101Q96P66 508 aaPredicted RBP9.73□□□□□ -0.85
CPSF4-202ENST00000412686 BICC1Q9H694 974 aaKnown RBP9.73□□□□□ -0.85
CPSF4-202ENST00000412686 RTL9Q8NET4 1388 aa9.73□□□□□ -0.85
CPSF4-202ENST00000412686 GOLGB1Q14789 3259 aaKnown RBP9.72□□□□□ -0.85
CPSF4-202ENST00000412686 LMNB1P20700 586 aa9.72□□□□□ -0.85
CPSF4-202ENST00000412686 GPSM2P81274 684 aa9.72□□□□□ -0.85
CPSF4-202ENST00000412686 SOGA3Q5TF21 947 aa9.72□□□□□ -0.85
CPSF4-202ENST00000412686 ANKRD18AQ8IVF6 992 aa9.72□□□□□ -0.85
CPSF4-202ENST00000412686 PANK1Q8TE04 598 aa9.72□□□□□ -0.85
CPSF4-202ENST00000412686 ZNF526Q8TF50 670 aaPredicted RBP9.72□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms