RNA–Protein interactions for RNA: ENST00000411934.6

RPE-204, Transcript of ribulose-5-phosphate-3-epimerase, humanhuman

TSL 1 (best) BASIC

Gene RPE, Length 792 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPE-204ENST00000411934 CCDC152Q4G0S7 254 aa10.4□□□□□ -0.74
RPE-204ENST00000411934 PRPF40BQ6NWY9 871 aaKnown RBP10.4□□□□□ -0.74
RPE-204ENST00000411934 ZNF622Q969S3 477 aaKnown RBP eCLIP10.4□□□□□ -0.74
RPE-204ENST00000411934 CACNA1SQ13698 1873 aa10.4□□□□□ -0.75
RPE-204ENST00000411934 SNED1Q8TER0 1413 aa10.4□□□□□ -0.75
RPE-204ENST00000411934 SLX4Q8IY92 1834 aa10.4□□□□□ -0.75
RPE-204ENST00000411934 ABCC4O15439 1325 aa10.39□□□□□ -0.75
RPE-204ENST00000411934 F6X3S4 739 aa10.39□□□□□ -0.75
RPE-204ENST00000411934 GRM8O00222 908 aa10.39□□□□□ -0.75
RPE-204ENST00000411934 BBOX1O75936 387 aa10.39□□□□□ -0.75
RPE-204ENST00000411934 CASP7P55210 303 aa10.39□□□□□ -0.75
RPE-204ENST00000411934 CTSWP56202 376 aa10.39□□□□□ -0.75
RPE-204ENST00000411934 GRAPQ13588 217 aa10.39□□□□□ -0.75
RPE-204ENST00000411934 CCDC93Q567U6 631 aa10.39□□□□□ -0.75
RPE-204ENST00000411934 DDX46Q7L014 1031 aaKnown RBP10.39□□□□□ -0.75
RPE-204ENST00000411934 PELP1Q8IZL8 1130 aaKnown RBP10.39□□□□□ -0.75
RPE-204ENST00000411934 CCDC24Q8N4L8 307 aa10.39□□□□□ -0.75
RPE-204ENST00000411934 GRAPLQ8TC17 118 aaPredicted RBP10.39□□□□□ -0.75
RPE-204ENST00000411934 BCL2L13Q9BXK5 485 aa10.39□□□□□ -0.75
RPE-204ENST00000411934 HDAC5Q9UQL6 1122 aa10.39□□□□□ -0.75
RPE-204ENST00000411934 MS4A1P11836 297 aa10.38□□□□□ -0.75
RPE-204ENST00000411934 HCLS1P14317 486 aaPredicted RBP10.38□□□□□ -0.75
RPE-204ENST00000411934 LHX8Q68G74 356 aa10.38□□□□□ -0.75
RPE-204ENST00000411934 ATF7IPQ6VMQ6 1270 aa10.38□□□□□ -0.75
RPE-204ENST00000411934 UBE3BQ7Z3V4 1068 aa10.38□□□□□ -0.75
RPE-204ENST00000411934 RTKN2Q8IZC4 609 aa10.38□□□□□ -0.75
RPE-204ENST00000411934 C7orf43Q8WVR3 580 aa10.38□□□□□ -0.75
RPE-204ENST00000411934 NOB1Q9ULX3 412 aaKnown RBP10.38□□□□□ -0.75
RPE-204ENST00000411934 PPEF1O14829 653 aaPredicted RBP10.37□□□□□ -0.75
RPE-204ENST00000411934 ZKSCAN2Q63HK3 967 aa10.37□□□□□ -0.75
RPE-204ENST00000411934 INTS3Q68E01 1043 aaKnown RBP10.37□□□□□ -0.75
RPE-204ENST00000411934 SLC4A10Q6U841 1118 aa10.37□□□□□ -0.75
RPE-204ENST00000411934 C3orf67Q6ZVT6 689 aa10.37□□□□□ -0.75
RPE-204ENST00000411934 SYNE4Q8N205 404 aa10.37□□□□□ -0.75
RPE-204ENST00000411934 CDC5LQ99459 802 aaKnown RBP10.37□□□□□ -0.75
RPE-204ENST00000411934 PSMD1Q99460 953 aa10.37□□□□□ -0.75
RPE-204ENST00000411934 TMX4Q9H1E5 349 aaPredicted RBP10.37□□□□□ -0.75
RPE-204ENST00000411934 VPS33BQ9H267 617 aa10.37□□□□□ -0.75
RPE-204ENST00000411934 C9orf78Q9NZ63 289 aaPredicted RBP10.37□□□□□ -0.75
RPE-204ENST00000411934 GOLGB1Q14789 3259 aaKnown RBP10.37□□□□□ -0.75
RPE-204ENST00000411934 CSF1RP07333 972 aa10.36□□□□□ -0.75
RPE-204ENST00000411934 TRIM27P14373 513 aa10.36□□□□□ -0.75
RPE-204ENST00000411934 TTLL11Q8NHH1 800 aa10.36□□□□□ -0.75
RPE-204ENST00000411934 TAOK3Q9H2K8 898 aa10.36□□□□□ -0.75
RPE-204ENST00000411934 ATP6V0A2Q9Y487 856 aa10.36□□□□□ -0.75
RPE-204ENST00000411934 DICER1Q9UPY3 1922 aaKnown RBP10.36□□□□□ -0.75
RPE-204ENST00000411934 SBF1O95248 1867 aa10.36□□□□□ -0.75
RPE-204ENST00000411934 C21orf2O43822 256 aa10.35□□□□□ -0.75
RPE-204ENST00000411934 BCAR3O75815 825 aa10.35□□□□□ -0.75
RPE-204ENST00000411934 LMNB1P20700 586 aa10.35□□□□□ -0.75
RPE-204ENST00000411934 FKBP4Q02790 459 aaKnown RBP eCLIP10.35□□□□□ -0.75
RPE-204ENST00000411934 RABL6Q3YEC7 729 aaPredicted RBP10.35□□□□□ -0.75
RPE-204ENST00000411934 SP8Q8IXZ3 490 aa10.35□□□□□ -0.75
RPE-204ENST00000411934 LTBP1Q14766 1721 aa10.35□□□□□ -0.75
RPE-204ENST00000411934 TIAM2Q8IVF5 1701 aa10.34□□□□□ -0.75
RPE-204ENST00000411934 NFKBIEO00221 500 aa10.34□□□□□ -0.75
RPE-204ENST00000411934 GNAI3P08754 354 aa10.34□□□□□ -0.75
RPE-204ENST00000411934 RPS8P62241 208 aaKnown RBP10.34□□□□□ -0.75
RPE-204ENST00000411934 RTL5Q5HYW3 569 aaPredicted RBP10.34□□□□□ -0.75
RPE-204ENST00000411934 ARHGAP27Q6ZUM4 889 aa10.34□□□□□ -0.75
RPE-204ENST00000411934 ANKRD18AQ8IVF6 992 aa10.34□□□□□ -0.75
RPE-204ENST00000411934 GOLGA6L2Q8N9W4 650 aaPredicted RBP10.34□□□□□ -0.75
RPE-204ENST00000411934 SUPT20HQ8NEM7 779 aa10.34□□□□□ -0.75
RPE-204ENST00000411934 RTFDC1Q9BY42 306 aaPredicted RBP10.34□□□□□ -0.75
RPE-204ENST00000411934 USP44Q9H0E7 712 aa10.34□□□□□ -0.75
RPE-204ENST00000411934 RCAN3Q9UKA8 241 aa10.34□□□□□ -0.75
RPE-204ENST00000411934 FOXO4P98177 505 aa10.33□□□□□ -0.76
RPE-204ENST00000411934 FTSJ3Q8IY81 847 aaKnown RBP10.33□□□□□ -0.76
RPE-204ENST00000411934 DZIP1LQ8IYY4 767 aaKnown RBP10.33□□□□□ -0.76
RPE-204ENST00000411934 FRAT1Q92837 279 aaPredicted RBP10.33□□□□□ -0.76
RPE-204ENST00000411934 BSDC1Q9NW68 430 aaPredicted RBP10.33□□□□□ -0.76
RPE-204ENST00000411934 PODXL2Q9NZ53 605 aa10.33□□□□□ -0.76
RPE-204ENST00000411934 UTRNP46939 3433 aa10.33□□□□□ -0.76
RPE-204ENST00000411934 DUOX1Q9NRD9 1551 aa10.32□□□□□ -0.76
RPE-204ENST00000411934 ANKRD18BA2A2Z9 1011 aa10.32□□□□□ -0.76
RPE-204ENST00000411934 NBPF7P0C2Y1 421 aaPredicted RBP10.32□□□□□ -0.76
RPE-204ENST00000411934 UBTFL1P0CB47 393 aaPredicted RBP10.32□□□□□ -0.76
RPE-204ENST00000411934 ITGA6P23229 1130 aa10.32□□□□□ -0.76
RPE-204ENST00000411934 IGHMBP2P38935 993 aaKnown RBP10.32□□□□□ -0.76
RPE-204ENST00000411934 CELF1Q92879 486 aaKnown RBP10.32□□□□□ -0.76
RPE-204ENST00000411934 CHMP4BQ9H444 224 aaKnown RBP10.32□□□□□ -0.76
RPE-204ENST00000411934 GREM2Q9H772 168 aa10.32□□□□□ -0.76
RPE-204ENST00000411934 WWC3Q9ULE0 1092 aa10.32□□□□□ -0.76
RPE-204ENST00000411934 YY1P25490 414 aa10.31□□□□□ -0.76
RPE-204ENST00000411934 RASSF7Q02833 373 aa10.31□□□□□ -0.76
RPE-204ENST00000411934 IFIT5Q13325 482 aaKnown RBP10.31□□□□□ -0.76
RPE-204ENST00000411934 PDE3AQ14432 1141 aa10.31□□□□□ -0.76
RPE-204ENST00000411934 CCDC57Q2TAC2 916 aa10.31□□□□□ -0.76
RPE-204ENST00000411934 FAM161AQ3B820 660 aa10.31□□□□□ -0.76
RPE-204ENST00000411934 DPP8Q6V1X1 898 aaPredicted RBP10.31□□□□□ -0.76
RPE-204ENST00000411934 MPNDQ8N594 471 aa10.31□□□□□ -0.76
RPE-204ENST00000411934 SUCLG2Q96I99 432 aa10.31□□□□□ -0.76
RPE-204ENST00000411934 FBXO3Q9UK99 471 aa10.31□□□□□ -0.76
RPE-204ENST00000411934 COL4A1P02462 1669 aa10.31□□□□□ -0.76
RPE-204ENST00000411934 XDHP47989 1333 aa10.31□□□□□ -0.76
RPE-204ENST00000411934 TAF1P21675 1872 aa10.3□□□□□ -0.76
RPE-204ENST00000411934 A0A1B0GUL6 1792 aa10.3□□□□□ -0.76
RPE-204ENST00000411934 IARSP41252 1262 aaKnown RBP10.3□□□□□ -0.76
RPE-204ENST00000411934 MTX1Q13505 466 aa10.3□□□□□ -0.76
RPE-204ENST00000411934 C9orf131Q5VYM1 1079 aa10.3□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms